BGIOSGA014820

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Revision as of 04:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014820| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014820, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014820

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014820, complete gene.

LocusTag

OSJNBA0076N16.21

Ensembl Transcript ID

BGIOSGA014820-TA

Ensembl Protein ID

BGIOSGA014820-PA

Length

3384

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23035920..23039303

Sequence Coding Region

23039156..23039303,23038567..23038637,23038152..23038487,23037042..23037149,23036776..23036961
,23035920..23036591

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23035920..23039303 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23035920..23039303 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATCGATTTGTCCATGCCCGGGAGCTCCGGGCTCCTGGACGACATAGGGGGGAAGAAGTACATGAATTTCTTCAGCAACCGCTACGTGCTCGCGCTCACGGGCGCCGCAGGAATCGGCGGGTTCCTCTTTGGCTACGACACAGGTGTCATATCTGGAGCCCTTTTGTATATTCGGGATGACTTTCCAGCAGTCAGAGACAATTATTTCTTACAGGAGACAATCGTTAGCATGGCATTGGTAGGAGCCATCATTGGAGCAGCTGGCGGCGGCTGGATCAATGATACATACGGCCGTAGGAAGTCTACTCTTGTGGCTGACATGCTGTTTGCACTTGGCTCACTTGTTATGTGTGCTGCTGGTGGTCCTTACATTCTGATTCTTGGAAGGCTTCTTGTTGGCTTGGGTGTGGGTATAGCATCAGTCACAGCGCCAGTTTACATTGCTGAAGCTGCTCCTTCGGAAATTAGGGGAGGTTTGGTGTCAACTAATGTACTCATGATTACTGGTGGTCAATTCTTCTCCTACCTCATCAATCTTGGCTTTACTGAGGTTCCTGGAACATGGCGCTGGATGCTCGGAGTTGCTGCTGTGCCTGCAATTCTACAGTTTGTTCTGATGCTTTTTTTGCCAGAATCTCCCCGTTGGCTTTTCTGGAAGGATGAGAAAGCAAAAGCTATTTCTGTCCTAGAGAAGATTTATGACTCTGACCGTCTAGAGGAAGAGGTAGAGCTTCTTGCTTCTTCTTCAATGCATGAATTTCAGTCTGACGGTACTGGGAGCTATTTGGACATTTTCAAGTCAAAGGAACTAAGGCTAGCATTTTTTGCTGGAGCTGGTCTTCAGGCGTTCCAGCAATTTACTGGCATCAACACCGTCATGTACTACAGCCCAACAATTGTCCAGATGGCTGGGTTTACCTCCAACAAGTTGGCATTGCTCCTTTCCCTCATAGTCGCTGGTATGAATGCCGCTGGGACCATTGTTGGAATCTACCTGATTGACCGCTGTGGCCGGCGTCGCCTGGCCCTTACAAGCTTGGCTGGTGTGGTGGTCTCCCTCGCCATCCTAGCAATGGCCTTCATACTGCAGTCATCATCAGATATCTGTTCGAATGCACTCAATGGTGCCTGCCAAGGTGCACTGGGATGGTTCGCGGTGGCGGGACTCGCTCTATACATCGCCTTCTTCTCCCCAGGCATGGGGCCAGTTCCATGGGCAGTGAACTCCGAGATCTACCCCGAGGCATACCGTGGAATGTGTGGTGGCATGTCAGCCACTGTCAACTGGGTATCTAACCTGATTGTGGCACAAACATTCCTCTCGATCGTCGGGTTGGTTGGGACCGGCCTGACCTTCCTGATCATCGCCGGAATAGCGGTGCTGGCCTTCATCTTCGTGGCTCTCTACGTGCCGGAGACTAAAGGCCTCAGCTTTGAGCAGGTTGAGCTCCTGTGGAAGGAGAGAGCATGGGGAAACCAGGGCAATCGCCAGAGCCTTTTGGGCGCTGCACCGTAG</cdnaseq>

Protein Sequence

<aaseq>MTIDLSMPGSSGLLDDIGGKKYMNFFSNRYVLALTGAAGIGGFLFGYDTGVISGALLYIRDDFPAVRDNYFLQETIVSMALVGAIIGAAGGGWINDTYGRRKSTLVADMLFALGSLVMCAAGGPYILILGRLLVGLGVGIASVTAPVYIAEAAPSEIRGGLVSTNVLMITGGQFFSYLINLGFTEVPGTWRWMLGVAAVPAILQFVLMLFLPESPRWLFWKDEKAKAISVLEKIYDSDRLEEEVELLASSSMHEFQSDGTGSYLDIFKSKELRLAFFAGAGLQAFQQFTGINTVMYYSPTIVQMAGFTSNKLALLLSLIVAGMNAAGTIVGIYLIDRCGRRRLALTSLAGVVVSLAILAMAFILQSSSDICSNALNGACQGALGWFAVAGLALYIAFFSPGMGPVPWAVNSEIYPEAYRGMCGGMSATVNWVSNLIVAQTFLSIVGLVGTGLTFLIIAGIAVLAFIFVALYVPETKGLSFEQVELLWKERAWGNQGNRQSLLGAAP</aaseq>

Gene Sequence

<dnaseqindica>1..148#667..737#817..1152#2155..2262#2343..2528#2713..3384#ATGACGATCGATTTGTCCATGCCCGGGAGCTCCGGGCTCCTGGACGACATAGGGGGGAAGAAGTACATGAATTTCTTCAGCAACCGCTACGTGCTCGCGCTCACGGGCGCCGCAGGAATCGGCGGGTTCCTCTTTGGCTACGACACAGGTATATGGTTGCATGTGTGCCATTTACCTTCCAACTTTTGCCTGAACGTTTCATCAAGTGTAGCTGTTCTCGATGAATTTCCCCTCGCAGTAATAAGCGACATGTTTTTGGTTGCTTTGGACTTGTTGGGTTACTTCATTTTCATATGATGAAACATTCAGATGGTGTTTGGTCCAATTTGATATTTGACAGTATGTTCAGGAAGCCTATGGTTAGATATCATTGATACAAACAAACAAAGTTTGAAGTGGAAGTCTGAAATGAGATTTATGAATAGTGGACTTATTTTGTTGAGTTCGTGCTATGATCTCTACAGTACTGCATAAAGATAGATATTAATTTTAGCAGCGGGATGAAACCAATGCTTGCATCATTCTTATTAATTTCTAGCAAAATCTTCGAGTGTGTGTAACTTCACAGAATTACTGTACTGTATACTTTTGCCAAAAAAAAAAAAGAAAAGAAGAGAAGACAGTATGATAAATTTGTGCTCTTAGCTAAGAAATTTATTCTATCAGGTGTCATATCTGGAGCCCTTTTGTATATTCGGGATGACTTTCCAGCAGTCAGAGACAATTATTTCTTACAGGTTCAATCTAATCTAGTACAAATTACTGGTCATTAACCATATGGCACGCCTGCACCAACTGATTTTGGTTCTTCCGTAGGAGACAATCGTTAGCATGGCATTGGTAGGAGCCATCATTGGAGCAGCTGGCGGCGGCTGGATCAATGATACATACGGCCGTAGGAAGTCTACTCTTGTGGCTGACATGCTGTTTGCACTTGGCTCACTTGTTATGTGTGCTGCTGGTGGTCCTTACATTCTGATTCTTGGAAGGCTTCTTGTTGGCTTGGGTGTGGGTATAGCATCAGTCACAGCGCCAGTTTACATTGCTGAAGCTGCTCCTTCGGAAATTAGGGGAGGTTTGGTGTCAACTAATGTACTCATGATTACTGGTGGTCAATTCTTCTCCTACCTCATCAATCTTGGCTTTACTGAGGTAGACATTCAACCTCCATTTAATTAGCATATTTTATTCCATTATTCCTACACATTAGCAGTTTTCAGTTTAAGTTCTTTTAACATTCAACTATAAACGGAACAAGTTCAAGCTGAAAGCATTGCAGTTGAAATTTTTTTATTGAGCTTCCACAAACCAGGTCTTGCACTGCGATGGGGAACTTAACTGTTAACTGCAACTAAGTATATATATGAGCTCGCATCATATCTTTAATGAAAAAATAACAAGCTTGGGGTCGGTACTCTTGCACAAGAACCATGGAAAAGCTGCACATGTTATGTTATTCAAGATGAACTCCCTTGAGAAAGGATTTCAGCATCAATGCCATGTTTATACTACCTTTTTCTCCTTTTCATATATTTACCTTTTATGGTATTAACATTCCTGTTGGTGCTAGTTAACTGTGTAACACTTAATTAGCAATGAACAAGAGTCAGCTTCCTTGCCAGCAGCAATGGATGAATCACCAACAAGGTGTTGTTTGGTGCGTAGCCACTCTAGTGTTAATGCTCCATCTTTCTGTTTCTGAAATTCACTGCAGTATATACATCATTCTGTTTTCTTTTTTCTTAAATGAACTTCCTGTATTTATCTGAAATGCACATTTTATCCCTTGGCACATCATATGATTTTGTGATTTCAGTAGCCTATTCACTGTTTGTTCTTGAAGTACCACTTTACTTACCTGAGGATGAAAAATTATGTGTCATTTGAATCAAATAATTCAGTCAAGTAGAACCTTATAAAGCAATGACCAACAATATTAAATTATCATTGTGCATCTCCTTATAATTTGACTTGGGGTTTCATAATCTTGATGCATAACAAATCCTGCATTATTAAAAAACAATATAAGATGTCCTATAAAAGAAGATATACAACCATCTTTCTTGAGAGTTATAGTGGAGATATTCGTAAGCTGGTAATACATTAGTACGAGTAGTTGCAAACTTGCAATGATATGCATGCTACATGTCATAGGTTCCTGGAACATGGCGCTGGATGCTCGGAGTTGCTGCTGTGCCTGCAATTCTACAGTTTGTTCTGATGCTTTTTTTGCCAGAATCTCCCCGTTGGCTTTTCTGGAAGGTTATATTTTAAGCTTTTATTCAGTCATGTATTATCTCCTTTTATCTGCATTTTGTTGTTACATTAACTTTTCTTTACAGGATGAGAAAGCAAAAGCTATTTCTGTCCTAGAGAAGATTTATGACTCTGACCGTCTAGAGGAAGAGGTAGAGCTTCTTGCTTCTTCTTCAATGCATGAATTTCAGTCTGACGGTACTGGGAGCTATTTGGACATTTTCAAGTCAAAGGAACTAAGGCTAGCATTTTTTGCTGGAGCTGGTCTTCAGGTATGTTCATCATCTAGCATTCTAGCCCACTCATTTTAGGTATGTCTTAGTCCCTTAGACTCTTAGTCACCAGGGAGATAAACGGTTCACTGTGCTACGTGCATTCCTCAAGGAGCATTTGATTTATGCATCCTGTTGGTAACTACATGGAGTTTTCTCCCCTAAGACATGTTAATCTGTGCAGGCGTTCCAGCAATTTACTGGCATCAACACCGTCATGTACTACAGCCCAACAATTGTCCAGATGGCTGGGTTTACCTCCAACAAGTTGGCATTGCTCCTTTCCCTCATAGTCGCTGGTATGAATGCCGCTGGGACCATTGTTGGAATCTACCTGATTGACCGCTGTGGCCGGCGTCGCCTGGCCCTTACAAGCTTGGCTGGTGTGGTGGTCTCCCTCGCCATCCTAGCAATGGCCTTCATACTGCAGTCATCATCAGATATCTGTTCGAATGCACTCAATGGTGCCTGCCAAGGTGCACTGGGATGGTTCGCGGTGGCGGGACTCGCTCTATACATCGCCTTCTTCTCCCCAGGCATGGGGCCAGTTCCATGGGCAGTGAACTCCGAGATCTACCCCGAGGCATACCGTGGAATGTGTGGTGGCATGTCAGCCACTGTCAACTGGGTATCTAACCTGATTGTGGCACAAACATTCCTCTCGATCGTCGGGTTGGTTGGGACCGGCCTGACCTTCCTGATCATCGCCGGAATAGCGGTGCTGGCCTTCATCTTCGTGGCTCTCTACGTGCCGGAGACTAAAGGCCTCAGCTTTGAGCAGGTTGAGCTCCTGTGGAAGGAGAGAGCATGGGGAAACCAGGGCAATCGCCAGAGCCTTTTGGGCGCTGCACCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014820