BGIOSGA014821

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Revision as of 04:04, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014821| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014821, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014821

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014821, complete gene.

LocusTag

OSJNBA0076N16.20

Ensembl Transcript ID

BGIOSGA014821-TA

Ensembl Protein ID

BGIOSGA014821-PA

Length

4223

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23029557..23033779

Sequence Coding Region

23033692..23033779,23033342..23033559,23032096..23032536,23030489..23030607,23029557..23030364

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23029557..23033779 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23029557..23033779 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGTTGGAGGCTTTGTGGACTGGAGGGGAAACCCGATAGACAGAAAGGTACATGGAGGAGTCAGAGCTGCATGGTTTATGTTCTTTCTGTCAGTGGTAACAAACATGGAAAATATTCCAAACATGCTGAATTTGGTTACATATCTCCATGGAACCATGCATATGGGAGTTTCAAGCTCTGCAACCACAGTTACTAACTTCATTGGTGCCACATCTGGATTTGCTTTATTAGGAGCTTTCCTCTCAGACTCGTACATCACTCGCTCTAGAACCATACTACTCTTTGGTCCGTTGGAGTTTCTGGCTCTTGGATTGCTCGCTCTGCAAGCCTACCTCCCCTCACTCCATCCACCACCTTGCAATATTGAAGCAGAGCTAAGCAACTGCGAAGAGGTTCATGGCTTCAACACCGTCATATTGCACATAGGCTTGTACACCTGGGCATTCAGTGAAGGCTGTATCCGTGCTTGCACGCCATCACTTGGAGCAGATCAGTTTGACCATGAAGATCCCTCTGAATCCCGCCAACAATCCAGTTTCTTCAACTGGTTCACCTTTGGAATCTCCTTAGGAGGATTTATAGGATTGATTCTAATAGTGTGGCTCGAGAACTACAAGGGGTGGGACATTGGATTTGGCGTGTGTGCACTGCTAATTCTTCATGGGTTGCTCATAGTTGCCACTGGCCTCCCTTTCTACCGTAATCAAGTACCAGAAGGAAGCCCTCTAACTCGGATACTGCAGGTTCTTGTGGTTGCATTCAAGAACAGGAAATATGAACTTCCCGAGAAACTTGAGGAAGCACAAGAAAACCGTAATGGACTGGATTCTATTGAAGTACCACGTCCTACAAATTTTCTGAAATTTCTTGACAAAGCCTCCATCAACCATGGTGAAGATGGAGCCTGGTCAGTTTGCAGCACAATGAAAGTGGAGGAGACAAAGATTGTTCTTCGAATGCTTCCCCTCTTCATCAGCTCCATGATCGGTTATATCTCAAACCCTCTGCTCCTCACTTTCACTGTGCAACAAGGTAGCATGACAAACACAAGGCTGGGCAAGATACATATCTCCCCCGCGACGCTCTTTGTGATCCCCATCACATTCCAGATGCTAATGCTCGCCGTCTATGATCGCTTCCTTGTTCCGTTCATGCGCAAGCGCACAGGATATGCCTGCGGTATCACTCACCTGCAACGTGTTGGCTTAGGCTTTGCCTCCATGATAGTTGCATCGGCCGTTGCAGCAGTCGTCGAGAGAAAGAGGAAGGAGGCAGCTGTGCAGATGTCCCTCTTCTGGCTTGCCCCTCAGTTCTTCTTGCTTGGCGTGTCAGACGTTACATCGTTCGTCGGGCTGCTTGAGTTCTTCAACAGCGAAGCACCAAAGGATATGAAGTCCATTGGCACGGCGCTGTTCTGGTGCGAGCTGGGTCTCGCTTCATGGATGGGCACGTTCCTGGTGGAGCTGGTGAACAAGGCTACGAGGCATGGACACCATAGAGGGTGGCTCGAGGGTACAAGCTTGAACAACAGCCACCTTGACTTGTTTTACTGGGTGGTTGCTGTTATCGGGCTGCTTGGCTTCTTGAATTACCTGTACTGGGCGAAGAAGTATGCCTACCGGCACAATCCACGCATGGTCACCCCATCAGCTGATCAGGACTCACCGTGA</cdnaseq>

Protein Sequence

<aaseq>MVVGGFVDWRGNPIDRKVHGGVRAAWFMFFLSVVTNMENIPNMLNLVTYLHGTMHMGVSSSATTVTNFIGATSGFALLGAFLSDSYITRSRTILLFGPLEFLALGLLALQAYLPSLHPPPCNIEAELSNCEEVHGFNTVILHIGLYTWAFSEGCIRACTPSLGADQFDHEDPSESRQQSSFFNWFTFGISLGGFIGLILIVWLENYKGWDIGFGVCALLILHGLLIVATGLPFYRNQVPEGSPLTRILQVLVVAFKNRKYELPEKLEEAQENRNGLDSIEVPRPTNFLKFLDKASINHGEDGAWSVCSTMKVEETKIVLRMLPLFISSMIGYISNPLLLTFTVQQGSMTNTRLGKIHISPATLFVIPITFQMLMLAVYDRFLVPFMRKRTGYACGITHLQRVGLGFASMIVASAVAAVVERKRKEAAVQMSLFWLAPQFFLLGVSDVTSFVGLLEFFNSEAPKDMKSIGTALFWCELGLASWMGTFLVELVNKATRHGHHRGWLEGTSLNNSHLDLFYWVVAVIGLLGFLNYLYWAKKYAYRHNPRMVTPSADQDSP</aaseq>

Gene Sequence

<dnaseqindica>1..88#221..438#1244..1684#3173..3291#3416..4223#ATGGTGGTTGGAGGCTTTGTGGACTGGAGGGGAAACCCGATAGACAGAAAGGTACATGGAGGAGTCAGAGCTGCATGGTTTATGTTCTGTAAGTTGCTCTACTGAGTCCATTGATTAATATATTGTTCCTGGCTTCTTGCGTTATTTGTGTAATTACTCACTAACAGTAGGTTTTCCTATTGAAATCGAAGTGTTTTTTTATGCTTGTTCTCTCTTGTAGTTCTGTCAGTGGTAACAAACATGGAAAATATTCCAAACATGCTGAATTTGGTTACATATCTCCATGGAACCATGCATATGGGAGTTTCAAGCTCTGCAACCACAGTTACTAACTTCATTGGTGCCACATCTGGATTTGCTTTATTAGGAGCTTTCCTCTCAGACTCGTACATCACTCGCTCTAGAACCATACTACTCTTTGGTCCGTTGGAGTTTCTGGTAATTTGCCTCATGGTCTATTCAACGGTCTATATATTCTGGGTATCATCCATTGAAATTTCTTGATTTCACTTTCTTTTTATCTTTACTAGTGACAGCCTGCCAAGAGAAGGGGAAAAAAAACACAGTACTCGTCGCAGTTATTTTAATCACAGCTAATGAATGTAAACTAATAGCATCATATAGTTACATCAGATGTTGAAAGAAACCCATGAAAATTATTTCACATGTTGCCTCTGTTTTTTCTTCTAACATTATTCTCAGCTGTAATCACACCGATATCCAAAAAGCTGCAGGTTGCCTGAAACTTCAAAAGCTGAGGTTGCTAAATCGTTTTCCCAAGCTCAAAGTAGCTGGGAACTTGGGATACATACAAAACAAGATTCTTACAAGTTGCTAAGGAAAACAATTTTATATCTCCTTCAGAATTAGTTAGGTGTGAATTAAGCCAAAACACCAGATCATATTCTGTTGAACTTTTTTTTTTTTTGAAAGGAATATATTCTGTTGAATTTTTAACTATGGTTTGGTCATCACCTACTGTGGGTCTGTGGCATAACCTTGATCCGAAGCCTACTTGATAAAGATATTAAAGGACCTCTATGTAAAAAAGTACATCGGCATCTTCTTGTTTGCTTGTGGTTAAATTAGCATTGATTTTCTTCAGACAATTAACTTATAGATACTTTCACTAGTTTAAAACTTAATATCTGGATATAAGTTTCTATCTTTGCTCACAGCCACCGAACAAGTAGTTTCTGCTTCATACTGGTTTAAGTTCCAAGGTAACAATCTACTTGTGCAGGCTCTTGGATTGCTCGCTCTGCAAGCCTACCTCCCCTCACTCCATCCACCACCTTGCAATATTGAAGCAGAGCTAAGCAACTGCGAAGAGGTTCATGGCTTCAACACCGTCATATTGCACATAGGCTTGTACACCTGGGCATTCAGTGAAGGCTGTATCCGTGCTTGCACGCCATCACTTGGAGCAGATCAGTTTGACCATGAAGATCCCTCTGAATCCCGCCAACAATCCAGTTTCTTCAACTGGTTCACCTTTGGAATCTCCTTAGGAGGATTTATAGGATTGATTCTAATAGTGTGGCTCGAGAACTACAAGGGGTGGGACATTGGATTTGGCGTGTGTGCACTGCTAATTCTTCATGGGTTGCTCATAGTTGCCACTGGCCTCCCTTTCTACCGTAATCAAGTACCAGAAGGAAGCCCTCTAACTCGGATACTGCAGGTTATAAACTTAAACTAGCATGGTGGCCCGCGCAATCATCATCGTTATATTTTTCCCATAAAATACCATATATATATATATATATATATTCACATTTTATTATTAAAATAGATTGAAATGACAACATAATTTTAAATTATTTATGTACTAACTTGATAAAACTAACCAATGTGCAATATTCATACTGTAATGTATATGCGTGAAAGTTATTTATTGTTTTTTACTTTAGTTATTTCTAAATTTTATTTATATATATAATTTATACTCCTCTTTCAATATTTCTTATCTATTAATTTCATATTTCTGTTATTTTTAAATTGTACTCCTATATGAACAATAGACTGTTCTTCCAATATTTCTTATTTTTAATTATGACTTTATGTTATTTATAAATTGTATTCCTATATGGAGTCTAGATTCTTCTTCCAATATTTTTTTTAGTTTCAAATTTCAATTATTTCTAAATTATATTCCTATATGGACTCTAAACTCTTTTTCCAATCTTCTTTTTTTTTTAAAAAAAATTTATGAATTTCAGTTATTTCTAAATATATTTTTATATGGACTCTAAACTTTACTTTTAATTTTTCTTATTTTTTATTTTCGACTTTCAATTGGTTCTAAATTCATATATAGGCTCTAGACTCTTCTGTCACTATTCCTTATTTTTTTATTCCGAATTTCTGTTATTTCTAATTGTATTTTTATGGACTCTAAACCCATCTTCTAGTATTCCTTATTTTTAAATTCCAAATTTTAGTTATCTCTAAATTGTACTCTTATATAGAGGTTCCTTTTATTACCAATCTAATATGTTAATTTGTAGCACACAAATTTATTTGTTAGACGATCCTTTGCTATAAGATTATGGCATTCTTGGGTGCCAATTTATTATTGAAGTGGATTCCGGCGGCAAAACTTCCGTCTTGCTAATTTATTGGTAAAGCTGATTGCGGCTGGAAGATTTATGGCTGGATATTTGTGTTTTGCGTTTTGTTTTCATTGCTAGGAGTATCGATCTATTTATTACTACGGGATGAATCGTGTACAATTCAGAACCGTATAAACTAATACCGCCATGGATGCTAATTCCATGAAAGAATCTAATTATGATTGGTTTGTTAACTGTTGTCCGTTTCCTACACTATAACCATACATGAATATTTATTGTTATATCACAGTTCCAAAAAGAATCCTGCCCGTTTGTTTTTTTGCTTCTAATTTTCATCCGATTAAGAGTTGTGATCAGTTTCCTAAACCTATACAATGCGTGCGTGAGTATGTTCCTAGTATGTCATGTTTCCAAAAGAATAATGTCCGTTTGTTTTTTTTTCTTTTTTTCTTTGATTAACGTGGTAATTTTTAGGCCGCGAGAGCGAACGTGGTGGCTCTTTTTTCTATTGCTTTATAGATATAATAGATTTCCATCTCTCAAGAGAAAATCACCATTCCATATCTGCCGCCTATCTGAAAAATTGCCTTTTCCAGGTTCTTGTGGTTGCATTCAAGAACAGGAAATATGAACTTCCCGAGAAACTTGAGGAAGCACAAGAAAACCGTAATGGACTGGATTCTATTGAAGTACCACGTCCTACAAATTTTCTGAAGTAAGCTTCAGCAAGATACACACATTTTTTCAGTTAAGGGTATCACACATCATGCATGGATTTTAAGAGAATATGATTCTTTAGTAAATGTTATAAATTCTTCTGCACACTTTTTTTTTGCCAGATTTCTTGACAAAGCCTCCATCAACCATGGTGAAGATGGAGCCTGGTCAGTTTGCAGCACAATGAAAGTGGAGGAGACAAAGATTGTTCTTCGAATGCTTCCCCTCTTCATCAGCTCCATGATCGGTTATATCTCAAACCCTCTGCTCCTCACTTTCACTGTGCAACAAGGTAGCATGACAAACACAAGGCTGGGCAAGATACATATCTCCCCCGCGACGCTCTTTGTGATCCCCATCACATTCCAGATGCTAATGCTCGCCGTCTATGATCGCTTCCTTGTTCCGTTCATGCGCAAGCGCACAGGATATGCCTGCGGTATCACTCACCTGCAACGTGTTGGCTTAGGCTTTGCCTCCATGATAGTTGCATCGGCCGTTGCAGCAGTCGTCGAGAGAAAGAGGAAGGAGGCAGCTGTGCAGATGTCCCTCTTCTGGCTTGCCCCTCAGTTCTTCTTGCTTGGCGTGTCAGACGTTACATCGTTCGTCGGGCTGCTTGAGTTCTTCAACAGCGAAGCACCAAAGGATATGAAGTCCATTGGCACGGCGCTGTTCTGGTGCGAGCTGGGTCTCGCTTCATGGATGGGCACGTTCCTGGTGGAGCTGGTGAACAAGGCTACGAGGCATGGACACCATAGAGGGTGGCTCGAGGGTACAAGCTTGAACAACAGCCACCTTGACTTGTTTTACTGGGTGGTTGCTGTTATCGGGCTGCTTGGCTTCTTGAATTACCTGTACTGGGCGAAGAAGTATGCCTACCGGCACAATCCACGCATGGTCACCCCATCAGCTGATCAGGACTCACCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014821