Os12g0623400

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0623400| Description = Conserved hypothetical protein| Version = NM_001190138.1 GI:297729406 GeneID:9266574| Length = 2544 bp| Definition ...")
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Gene Name

Os12g0623400

Description

Conserved hypothetical protein

Version

NM_001190138.1 GI:297729406 GeneID:9266574

Length

2544 bp

Definition

Oryza sativa Japonica Group Os12g0623400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26844758..26847301

Sequence Coding Region

26844758..26844869,26844982..26845185,26845287..26845437,26846250..26846294,26846423..26846493
,26846573..26846658,26846871..26846973,26847195..26847301

Expression

GEO Profiles:Os12g0623400

Genome Context

<gbrowseImage1> name=NC_008405:26844758..26847301 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26844758..26847301 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgaagatctcgtcgctgtgcaccgccctctcgtccgtgctcaaccacgccgacgactcctcccgcgcgctctccgacgcgctctcccgccgccccatccatctcgagtcggcggcgagggggttcctgcaggggctggaacggcggtcggaggcggcgggcgccgacctgtcgcggctcgagtcgatggcgttcggcaccgtctccttcgaggagctcctcggccactgcggcgaggcgctcgccatgttctcccgccacgccgacgccatcgagtcccgcctcgtcgccttcggctacgtgccacccgacgaggaggcgagcgaggatgtggaggaagattgggatgtcgagaagcttcccggggtcgctgggaatgggtgctttggtggaacgagttcagtgctgaggtccagtagagagatggtggatgatgacgatgcattgtatccttatgtttgtggtttatctggaagcacagagatactttacaggaaacctgaaagtgttgctgatgttgaaaacaaagtaaatgatgccgaatccatgattcccccgaaagaaacaaatggtcaaggtaatgatgcacaaggagccataaaggcatccaaggaggagtatgagaaattacctccgtacatgaagactcttgcaacatgggaggaattgcaggaggcaatatcgaaattaaactcatacttcagcagtgacaaaactcagggcaatgttgcattgaatcaagatgatgttggagagattggattggggcgcaaaggaagatcctacttgttgatccttctgcggatgaatcagttggctatggagaatattgatggctcgatcttctacaatatacgcaagagcgactcctag</cdnaseq>

Protein Sequence

<aaseq>MEAKISSLCTALSSVLNHADDSSRALSDALSRRPIHLESAARGF LQGLERRSEAAGADLSRLESMAFGTVSFEELLGHCGEALAMFSRHADAIESRLVAFGY VPPDEEASEDVEEDWDVEKLPGVAGNGCFGGTSSVLRSSREMVDDDDALYPYVCGLSG STEILYRKPESVADVENKVNDAESMIPPKETNGQGNDAQGAIKASKEEYEKLPPYMKT LATWEELQEAISKLNSYFSSDKTQGNVALNQDDVGEIGLGRKGRSYLLILLRMNQLAM ENIDGSIFYNIRKSDS</aaseq>

Gene Sequence

<dnaseqindica>1..112#225..428#530..680#1493..1537#1666..1736#1816..1901#2114..2216#2438..2544#atggaggcgaagatctcgtcgctgtgcaccgccctctcgtccgtgctcaaccacgccgacgactcctcccgcgcgctctccgacgcgctctcccgccgccccatccatctcggttggtaccaccaccacctctcgtcccggcgtttctctcgacgccgttagggtttggggatcctatgctcacgcggtgggggtatcggatactgcgcctgcctgtgatgcagagtcggcggcgagggggttcctgcaggggctggaacggcggtcggaggcggcgggcgccgacctgtcgcggctcgagtcgatggcgttcggcaccgtctccttcgaggagctcctcggccactgcggcgaggcgctcgccatgttctcccgccacgccgacgccatcgagtcccgcctcgtcgccttcggctacgtgccacccggtagcaccaactcactccccccatgggagattctgaacccgatcgtgtcaatttttttaagctcttggttgagaattgcaagtttgctgtgcttcttgtagacgaggaggcgagcgaggatgtggaggaagattgggatgtcgagaagcttcccggggtcgctgggaatgggtgctttggtggaacgagttcagtgctgaggtccagtagagagatggtggatgatgacgatgcattgtatccttatgtttggtttgattgtttttcttcctttttctgttcaggatagtctctgatttggttgctttcgcttctgcgtatgcttgatctgatggaatggttagatacaggacgtcgaaatgtatagggacttgttcattcagcttatattctgtggctagttttagtaggttcgtgcacctgcaattctaattctgaatttggaggtttggtcatttagcccctgtttattcatgtagcaggtgtacaacaccattattagctatgagcctatgactctatgagtatttgttgatttgttcctcctgttctattaaatcttccttctttttttcatttttccatacattatttgagacacgcagtacatcataaattagattggtcagggagccaggggctcactgttcgcgattatatgaaaaatatagtaccgtattaccaacaattctgatgtctgaggggcttttatttattcttggcaaaagggtgcaataactataattctagtagtttatatagtgtaagctgtctttgtccgcaatctgctgttcttcaccacaaccgttcagcattaaaaatttgtgcttgcatatatttgttcggtggttttatatgacgaaaatgagaagcgttgagttctttcttgaccgccagtaagatttgagaactccatgtcactaaagaatcttggcttctcagatgcttgtctagctaccttgtcctctcaaggtatgtcacactagaacaatatcgtcgttacaactgtttgcatggtacacctctttgttggcatcgataatttgcttaaattttgcagacagtggtttatctggaagcacagagatactttacaggaaacctgaaaggtatctaaaggaattgtagattatttttgtattgctactagcctacaattgcttttcctcagtgttcttttgtacctatcaggttcattacttctttgtttctaaaaatgacttgtgatgcttctcagtgttgctgatgttgaaaacaaagtaaatgatgccgaatccatgattcccccgaaagaaacaaatggtcaaggtgggcagcagcgatgtcttcctgactaaagagatggtttttgatcattctgatttttttcactgttgaatttgttaaggtaatgatgcacaaggagccataaaggcatccaaggaggagtatgagaaattacctccgtacatgaagactcttgcaacatgggaggtctgtttttcctcaattaagtgggaattctcatattattttttgcatattagctattggtgatggtaaaagatcatggtacagattacttaaaatgaaaatactaaaaggagaatattctgcaatgtcaagagtttcctgttttgtcttagtgagactacctcagagaaatttaccatattgcttacctttctgctaccttattgcatcaggaattgcaggaggcaatatcgaaattaaactcatacttcagcagtgacaaaactcagggcaatgttgcattgaatcaagatgatgttggagagattggattgggtatgtgagttcccttaaggtttaaatgtcaagaatgtcgagctcccataaagagcttctcattgggttactattttttgttcgattgatgcatggtcatacattattgtttcactgcttcagaagtctataactatgaaacttgatatcccgtataattacctgttatgatcttgtcttcaatgacacaactaaatgttttactctgttgttctttctagggcgcaaaggaagatcctacttgttgatccttctgcggatgaatcagttggctatggagaatattgatggctcgatcttctacaatatacgcaagagcgactcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0623400, RefSeq:Os12g0623400