BGIOSGA014872

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Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014872| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014872, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA014872

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014872, complete gene.

LocusTag

OSIGBA0116M22.12

Ensembl Transcript ID

BGIOSGA014872-TA

Ensembl Protein ID

BGIOSGA014872-PA

Length

3141

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22375501..22378641

Sequence Coding Region

22377838..22378641,22376718..22376816,22376340..22376457,22375856..22375933,22375501..22375580

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22375501..22378641 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22375501..22378641 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCCCGCCGCCGCCGCGAAGCTCTCCGTCTCCGGCGCCGCCCTCGCGGCGCTGCTCGCCTGCTGCGGCTCGGCCGACGGCGACTCCGACGGGCTCCTCTTCGGCGTGGCTAGCCGCGCAGCCGCGGCTCCCCCGTCCTTCTACGACGACGACGACGACGACCAGGCCCGCGCCTCCTCGGGCCCCTCCCTCTCCATCTCCGTCGTGGGGCACGCCTCGGTCGCGCAGCCTTCCTCCCTCGCCGATCCGCTCGGCCGCTTCACCAGGTCGTCCTACTCCCCCGACCCCTCCGCCGCCATCGGCTTCTTCTCCTCCTCCCGCCGCCGCTCGCCGCTGCGCCCCTCCATGCGCGAGGCCGCCCTCGCGCGCTCCCTCTCGAAGACCCTGGTGCTCGCCCACCCGCTCGTCTTCCTCCTCGTGGCACCATCCTCCTCCGCCGCTGGCCTCTCCGTTCACTCGTTCGACTACCGTGCGTTCCTCCTCGTTGACTCCCGCCTTGTGCCGGCCTCCCTCAGCGTCGTCAACGCTGGGCCCGGATTCAGGGAGCAGTACCACGCCTTCGCGCCGGAGTCGCCGTTGCCGTCGCTGCCGGAGCAGCCTGTAAAGCAGGGTTACAGCATTGGTGAGCAGAAGGCGCTTGATGGGATGGTAGAAGGGTTCGGGCTGGAGAGGGTAGGGGCAATGGTGACCTCGGCCTCTGCGCTGACCTCCGAAATGGAGGAGATGTACAGTGGGATGCTAAGGAAGCTGGAGGGGCTTGCTCGGCAGGTTGAGCGGACCAACGAACGCGTGCTCGATCAGATAGTCCGCCATAGTACCATGACACATTTCTTAGACGGTGACTGCTATCTATCTTGTGAAAAGCTGCAAAGGCAACTAAAATTGCAATTAGCAGTACAGCTAAAAATAGAATTGAAAAATATGCTTCCAAGAATCAGTTATAGCAGTTATGCCCTTTTTGGTGGTTGCTCAGAAGCCACAAAATCACGATTTAAGCCCTGGAATGCTGCTGATCTTGGAAAAACAGAATACATTGCTCAGGAAAAAGGTTGCTGGATTGAAATAAGGACAGTGATTTGTTCTCAGCAACAACAAGCAATACACACAATAGTGGAGCTTGAACTAATAAATCTCAAGAGGGGCCAAAATAAGATTGCGGTTCTTTGGAATTTATAG</cdnaseq>

Protein Sequence

<aaseq>MAPAAAAKLSVSGAALAALLACCGSADGDSDGLLFGVASRAAAAPPSFYDDDDDDQARASSGPSLSISVVGHASVAQPSSLADPLGRFTRSSYSPDPSAAIGFFSSSRRRSPLRPSMREAALARSLSKTLVLAHPLVFLLVAPSSSAAGLSVHSFDYRAFLLVDSRLVPASLSVVNAGPGFREQYHAFAPESPLPSLPEQPVKQGYSIGEQKALDGMVEGFGLERVGAMVTSASALTSEMEEMYSGMLRKLEGLARQVERTNERVLDQIVRHSTMTHFLDGDCYLSCEKLQRQLKLQLAVQLKIELKNMLPRISYSSYALFGGCSEATKSRFKPWNAADLGKTEYIAQEKGCWIEIRTVICSQQQQAIHTIVELELINLKRGQNKIAVLWNL</aaseq>

Gene Sequence

<dnaseqindica>1..804#1826..1924#2185..2302#2709..2786#3062..3141#ATGGCCCCCGCCGCCGCCGCGAAGCTCTCCGTCTCCGGCGCCGCCCTCGCGGCGCTGCTCGCCTGCTGCGGCTCGGCCGACGGCGACTCCGACGGGCTCCTCTTCGGCGTGGCTAGCCGCGCAGCCGCGGCTCCCCCGTCCTTCTACGACGACGACGACGACGACCAGGCCCGCGCCTCCTCGGGCCCCTCCCTCTCCATCTCCGTCGTGGGGCACGCCTCGGTCGCGCAGCCTTCCTCCCTCGCCGATCCGCTCGGCCGCTTCACCAGGTCGTCCTACTCCCCCGACCCCTCCGCCGCCATCGGCTTCTTCTCCTCCTCCCGCCGCCGCTCGCCGCTGCGCCCCTCCATGCGCGAGGCCGCCCTCGCGCGCTCCCTCTCGAAGACCCTGGTGCTCGCCCACCCGCTCGTCTTCCTCCTCGTGGCACCATCCTCCTCCGCCGCTGGCCTCTCCGTTCACTCGTTCGACTACCGTGCGTTCCTCCTCGTTGACTCCCGCCTTGTGCCGGCCTCCCTCAGCGTCGTCAACGCTGGGCCCGGATTCAGGGAGCAGTACCACGCCTTCGCGCCGGAGTCGCCGTTGCCGTCGCTGCCGGAGCAGCCTGTAAAGCAGGGTTACAGCATTGGTGAGCAGAAGGCGCTTGATGGGATGGTAGAAGGGTTCGGGCTGGAGAGGGTAGGGGCAATGGTGACCTCGGCCTCTGCGCTGACCTCCGAAATGGAGGAGATGTACAGTGGGATGCTAAGGAAGCTGGAGGGGCTTGCTCGGCAGGTTGAGCGGACCAACGAACGCGTGCTCGATCAGGTGATTGTTGGATCCTGAGTTTTGTGTTGTCAGAATTTTGCCTTTTGGAGTATATTGTTGTCTCTATGGACAAATTGATTGATCCTGTGTCAATTGTTAGGCTAACTTGAAACAATATTTCTGTTATGTGAATTAGGCAAGATTTATTCACATCAGAATAGAAGAAACGATCGAACAATTTGGATGAATCTGCCATCATGGACAGAGGGGGTATGAAATATTTTCTAGATAGAAAGGCTAAATCAGTTTCCAAAGAATTCATGTTCTGCTTAACGCAATAACATTGCCTCCTGAAACCAATTTTCTTTTTGAATATCCGTGTTTGCTTAAGGAAGCAGATTGTATTACCCTTCTTTAATTTCTTAATCTGCTATGTGGCATCGCCCACTTCAAGGAAATTTTCAAAATAAGATTTAGCTAGGATATGCTGGGTAACTGGGAGTCTGGGATCTCCTGAGGCTGAGATAAAGTGGTATATGAAGAGTTGGAGCAGGGCGTGAATCCAGCCATGCAGGTTTGCAGGATCCAAGTGGCTATGGGAGGTCTAAATAGTTAATAAGGCATTCACCAAACATCTTTTTAGAACACCTATTTCTGGTGTAGCAATGTGTTGTATTATTTTGTTTTGACTACAAGTGTGGCTATTTGAGTTGTCATAAGCCAAAATAAGGTGGTGAGCTCTTTCGCTGGATTACTGTGGTGATATGCGAGATGGAAGAAATTGCATAGTTTGAGTTTTGAGTAACCACATGTATAATCCACGCTCTACTTTGGTCCTAGTGTGAATGAAACTATGCCTTGACAGCTCTGCCAAAACCATGTATAAATCTGAAATTTGTGATTTCTAATTTAACTAGTGCTGTTTTTTTTACTTGCTTGTTGATAGACTAATAGTTAAAGAGGTAATTCATCCATATCATGAGTCAGTTCTGATTGCCAGGAGGCAGTCTGCTTTGGTTGAGTCTGGCTGAACAAGTTAGGTCTAAGTGAGATTGAGTGCTGCTGTGTTCTAGTCTTCTAGATAGTCCGCCATAGTACCATGACACATTTCTTAGACGGTGACTGCTATCTATCTTGTGAAAAGCTGCAAAGGCAACTAAAATTGCAATTAGCAGTACAGGTGAGTGCTATAGCTATAGCACCTCTATCTGATACTGTATTTCTCATGGATAATTTTCTTCTGTTTGAGAAATCCTGTAGCTCGAATACCCTTAATTTCACGTGAATTGATACTAAACTGTCAGTTAAGAGTTTAAGACCCGTTGTTCTTTTCTTTTGACATGCTTTATGTGTAAAAAAGGTGTTTTATGTACTTCGTAATAAACTTTGAGCAATATAAGACTCATATTAAATTATTAATAAATTATGATATATAAAAAGCTAAAAATAGAATTGAAAAATATGCTTCCAAGAATCAGTTATAGCAGTTATGCCCTTTTTGGTGGTTGCTCAGAAGCCACAAAATCACGATTTAAGCCCTGGAATGCTGCTGATCTTGGTAAATGAATATGGTCACGAGCATGCAACTTGTTTGGGGCCTTTGGACTATACATAATTATTATCCATGTTTTTTTAGTTTGAAAAGGGCTTTAGAAACAGTACAAAGTGTTGTATTGAATACTTGAATGATAAATCCAGATTGGCTGTGCGCAGAATTTAAGGTTCTGCACATATATATGGTTTCATCTTGCATAGGCATGTGATTGAACTACATTATAATACAACTCAAATTTAACAGGGTCTATATCATGTTATTGTTGTCTTATTATTATTACTACTACTTCATCCAGTCATGCCTGGCCACAAATTTTGCAAGGATTGCATTTAGATATGCTACTGTTAGTAACAACTAGCCTATTCTTTGATGTGGTATTTCTGATCTGTATTCTGATATTGTTTTGTAGGAAAAACAGAATACATTGCTCAGGAAAAAGGTTGCTGGATTGAAATAAGGACAGTGATTTGTTCTCAGCAACAACAAGGTATATGCTTGCTGACTTACCCTGTTACTTACTCTGATAAGATTAAGGCAATAAGGTTCTGTTTGTTCATTCCAAATTGCCAAACTATTTTGGCTGCTCATTTTGTTGCACTATTTCCTTATTATAGTGATTATTCCTTGACTGTAAGTGTAATTATTTGATAGAATCAGCCATTTGATAAACTCCCATCTTTGTTGTACTATCTGTATGCATGCGATTGTTTAAAATGCATTATAAGGGCATTGTCTTTGCTGATAATTATTTTTGCTGTTAAGCAATACACACAATAGTGGAGCTTGAACTAATAAATCTCAAGAGGGGCCAAAATAAGATTGCGGTTCTTTGGAATTTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014872