BGIOSGA014884

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Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014884| Description = TA5 protein| Definition = Oryza sativa Indica Group BGIOSGA014884, complete gene.| tag = TA5| tid = BGIOSGA014884-TA...")
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Gene Name

BGIOSGA014884

Description

TA5 protein

Definition

Oryza sativa Indica Group BGIOSGA014884, complete gene.

LocusTag

TA5

Ensembl Transcript ID

BGIOSGA014884-TA

Ensembl Protein ID

BGIOSGA014884-PA

Length

1674

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22258466..22260139

Sequence Coding Region

22260077..22260139,22258829..22259160,22258565..22258730,22258466..22258474

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22258466..22260139 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22258466..22260139 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCGCCGCCGGGACGCTGCGCCGACGGCGCGCGAGGGCGAGAGGGATCTCGTCGTGAAGGTAAAATTCGGTGGCACTCTTAAGCGGTTCACTGCTTTTGTGAATGGTCCGCACTTTGATCTTAATCTGGCTGCTCTTCGGTCAAAGATTGCGAGTGCTTTTAAGTTCAATCCAGATACTGAGTTTGTACTCACCTATACTGATGAGGATGGGGATGTTGTCATACTGGATGATGATAGTGATTTATGTGATGCTGCCATTAGTCAGAGACTGAACCCTCTTAGGATTAATGTTGAGTTGAAGAGCAGCAGTGATGGGGTACATCAGACNAAACAGCAGGTACCGGATTCCATATCTGTAATGTCCACTGCTCTGGAAGATCATTGGCTCAGTGCCGTGGAGGACAACATGCTGAGAGAGCTGGGGCAGATGGGCTTCGGGCAAGTCGACCTGAACAAGGAAATAATTAGGCGGAACGAGTACAACCTGGAGCAGTCCATTGATGAACTCTGTGGCATCCTCGAATGGGATGCACTCCATGATGAACTGCACGAACTGGGCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MSRRRDAAPTAREGERDLVVKVKFGGTLKRFTAFVNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVVILDDDSDLCDAAISQRLNPLRINVELKSSSDGVHQTKQQVPDSISVMSTALEDHWLSAVEDNMLRELGQMGFGQVDLNKEIIRRNEYNLEQSIDELCGILEWDALHDELHELGI</aaseq>

Gene Sequence

<dnaseqindica>1..63#980..1311#1410..1575#1666..1674#ATGTCTCGCCGCCGGGACGCTGCGCCGACGGCGCGCGAGGGCGAGAGGGATCTCGTCGTGAAGGTGAGGTTTTCTTTTCTTTCTTTTTTTAATTTATTTTCCCGGCTCCTCGCGGGTGCGGTGTTTCTGTGCTAGGAATGCCGCGTTCTTGGTTTGCTCGCGCATGGGGGTTTTGTCGCAGGGAGGTGGGGAGTGGGTTCTGTTGCCCGTGCTGGGTTGTGGAGCGATGCGACCGGGTGGTAGTGTTGTTCTTGAAAGGATGGATTTTGCATCTTTTTGGGCGCCCAGGATTAGATCGTTTCTGTATTGTTTGCGATTGTGAAACTGTGTAGAAATATCGGGTCCTTAACGCGGCGATTTTTGTGAGGACTCTTTCGAAATCAAGATTATTGCAGGGATTGTAAAATAGTGTAGAAATATCAGTCCTTAACGCCGGCGATTATTGTGAGGACTCCTTCGAAATCGAGATTATTGCAGGGCTTTTTGTTTTTCTGATTAGCTAGACAAGAGTACTTGCTATGGGGATTTGATTGTAGAGTATCTTGATCACTTTGATGTATGTTCCTTTGTAATTTGTTGGTATGTTGAATGTTCCAGTTTTGCATGCTATGGTTGAATAAATCTGTTTAGGTTTGCATGATATGGCTGTATAAATCTCTTCAGTGTAGAAGACAACCCACTTCCCTCAACATGCAACGGCTTAACTTGGCAGTCGTCCTTAACTGATTAATGCCATGTAATTTTGGTACTTATGTAGCATCAGGTGCTGAGATTTGGTTCCGTGAATTGTGTTTTGACGCTACTGTTAACTGAATCAACATTGATCAGCTGCTAAGATAAGAACAGAATTGAGTTATCATTTGCTTAAGCATCTTGCCTGCAAAGCAAACCACTTACTGTTCTATTTAAGTTTACCTCGTGCAATTTTACTAGATTATTATTCTTATCTATTTCTCTTTTAATTTGCTTGATGTTTCAGGTAAAATTCGGTGGCACTCTTAAGCGGTTCACTGCTTTTGTGAATGGTCCGCACTTTGATCTTAATCTGGCTGCTCTTCGGTCAAAGATTGCGAGTGCTTTTAAGTTCAATCCAGATACTGAGTTTGTACTCACCTATACTGATGAGGATGGGGATGTTGTCATACTGGATGATGATAGTGATTTATGTGATGCTGCCATTAGTCAGAGACTGAACCCTCTTAGGATTAATGTTGAGTTGAAGAGCAGCAGTGATGGGGTACATCAGACNAAACAGCAGGTACCGGATTCCATATCTGTAATGTCCACTGCTCTGGAAGATCATTGGCTCAGGTGAAATTAGCTATCGATGAAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCCTTCATCTGATCACATCAGTGCCGTGGAGGACAACATGCTGAGAGAGCTGGGGCAGATGGGCTTCGGGCAAGTCGACCTGAACAAGGAAATAATTAGGCGGAACGAGTACAACCTGGAGCAGTCCATTGATGAACTCTGTGGCATCCTCGAATGGGATGCACTCCATGATGAACTGCACGAACTGGTAAGTTCAGGATGTCTCATTCCTATGCACCATATTTTGTCATTGCGGGTAAGAGTTAATCTGAACCTTTGCTTCTTATTTCCCCATCAGGGCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014884