BGIOSGA014885

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Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014885| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014885, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA014885

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014885, complete gene.

LocusTag

OSJNBA0044K18.2

Ensembl Transcript ID

BGIOSGA014885-TA

Ensembl Protein ID

BGIOSGA014885-PA

Length

4106

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22243179..22247284

Sequence Coding Region

22247222..22247284,22244862..22246243,22244641..22244755,22244333..22244545,22244082..22244231
,22243278..22243991,22243179..22243187

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22243179..22247284 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22243179..22247284 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCGCCGCCAGGACGCTGCGCCGACGGCGCGCGAGGGCGGGAGGGATCTCGTCGTGAAGGTAAAATTCGGTGGCACTCTTAAGCGGTTCACTGCTTTTGTGAATGGTCCGCACTTTGATCTTAATCTGGCTGCTCTGCGGTCAAAGATTGCAAGTGCTTTTAAGTTCAATCCAGATACTGAGTTTGTACTCACCTATACTGATGAGGATGGGGATGTTGTCATACTGGATGATGATAGTGATTTATGTGATGCTGCCATTAGTCAGAGACTGAACCCTCTTAGGATTAATGTTGAGTTGAAGAGCAGCAGTGATGGGGTACATCAGACAAAACAGCAGGTATTGGATTCCATATCTGTAATGTCCACTGCTCTGGAAGATCAATTGGCTCAGGTGAAATTAGCTATCGATGAAGCTTTAAAATTTGTACCAGAACAAGTTCCCACTGTCCTTGCAAAAATATCACATGACTTGCGTTCTAAAGCTGCATCATCAGCGCCATCATTGGCTGATTTGCTGGACCGGCTTGCTAAACTGATGGCACCAAAGAGCAAAATGCAGTCTTCCAGTGGTTCTGCTGATGGTTCATCTGGCTCCTCTAGTGGTAGGGGACAAACTATGGGAAGGTTGAATATTAAAAATGACACTGAGCTCATGGCTGTTTCAGCTTCGAACCCTCTGGATATGCATAACTCTGGATCAACTAAATCACTTGGTCTTAAGGGTGTGCTTCTTGATGACATCAAAGCTCAAGCTGAACATGTATCGGGATATCCTTATTATGTGGATACCCTTTCAGGCTGGGTAAAAGTTGATAACAAAGGAAGTACCAATGCCCAAAGTAACTGCAAGTCTGTTACATCCTCTGCTGTGCCACAAGTTACTAGCATTGGTCATGGTGCACCTACTGTTCATTCTGCTCCTGCTTCAGATTGCAGTGAAGGGTTAAGAAGTGATCTTTTCTGGACACAACTAGGCCTTTCTTCTGAGCCCTTTGGGCCTAATGGCAAGATTGCTGGTGATTTGAACTCGACATGCCCTCCTCCACCACTGTTTCCCCGTTATCCACTTCAGTCTCTCCGAGCTGATAAAAGCAGTTACAAGGGTGGTTCCTCTTACCCTCCATGCATCTGCAAAAGTAACACATCTAAGCCAGAGAATCTCTCCCATTATCCAGTTCAGTCCCTCCAAGCTGACAGAAGCTTTAAGGGTGGTCGCTATTTCCCTCCATGCACCTGCAAAAATAACACATCTAAGCCAGATAATCTTTCACCAGTCGGTCTTTATGGACCTTATTCTGAAGGCAGCAGCTGTAATAGGTGCCCATACAGGGATCTCAGTGATAAGCACGAGAGTATGGCACAGCACACACTGCATAGATGGATGCAGTGCGATGACTGTGGGGTCACACCTATCGCTGGTTCTCGCTACAAGTCAAATATTAAAGATGATTATGATTTATGCAGCACCTGTTTTTCTCGAATGGGCAATGTGAATGAATATACCAGAATAGACAGACCATCTTTTGGGAGTAGACGATTTAGAGACCTCAACCAGAACCAGATGCTCTTTCCACATCTTCGACAGCTACATGATTGCTGCTTCATTAAGGATATTACTGTCCCTGATGGCACAGTAATGGCACCATCAACCCCATTTACGAAGATTTGGCGCATACATAACAATGGATCTTCCATGTGGCCATATGGGACGTGTCTTACCTGGGTTGGCGGACATCTATTTGCACGCAACAGCTCAGTTAAATTAGGGATCTCGGTGGATGGTTTCCCTATTGATCAAGAGATCGATGTTGGTGTTTATTTTGTCACACCTGCAAAGCCTGGTGGGTACGTGTCGTACTGGAGATTGGCATCACCCACTGGCCAGATGTTTGGTCAGCGAGTTTGGGTTTTTATTCAGGTGGAACACCCGGGCAAAACCAGTAGCAACAAGCAGAGTGCTGCTATAAACTTGAACATACCCCCAGAAGGAAGCAACACAGAATGGAAGCATTCTGTTGATACGAATATTCAGTCTGCAGATATTGTGGATGAATACTCTGGAAGCACCATAACTGATCGTCTTGCACATACACTATACCATGAAGCCACCAAACCGATGGAACCTGAGCTTGTTTCAAGTGGCGCACCTTCTGTACCTAGAGCATTTGAATCAGTGCTAGTGCCAGCTACTGATCTCCTCACTTCATCTGCTGGAGCTGAAAAGGCTTTGAAGCCTGCTGCCGTGCCTGCACCTGCACCTCAAGCCATTCCCCTGCCAAAACCTGTTAGCATTCCTGCATCTGGACCTGCGCCTGCTCCTGTTAGTGCGACTACCGCTGCACCTATCGGAGCTGCTGCTGCTCCTATCAGTGAGCCCACCGCACCTGCTGCTGCCATTGGAATGCCCTCTGCAACTGCTCGTGCTGCTTCTCGCCTGCCTACCGAGCCTTCATCTGATCACATCAGTGCCGTGGAGGACAACATGCTGAGAGAGCTGGGGCAGATGGGCTTTGGGCAAGTCGACCTGAACAAGGAAATAATTAGGCGGAACGAGTATAACCTGGAGCAATCCATTGATGAACTCTGTGGCATCCTCGAATGGGATGCACTCCATGATGAACTGCACGAACTGGGCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MSRRQDAAPTAREGGRDLVVKVKFGGTLKRFTAFVNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVVILDDDSDLCDAAISQRLNPLRINVELKSSSDGVHQTKQQVLDSISVMSTALEDQLAQVKLAIDEALKFVPEQVPTVLAKISHDLRSKAASSAPSLADLLDRLAKLMAPKSKMQSSSGSADGSSGSSSGRGQTMGRLNIKNDTELMAVSASNPLDMHNSGSTKSLGLKGVLLDDIKAQAEHVSGYPYYVDTLSGWVKVDNKGSTNAQSNCKSVTSSAVPQVTSIGHGAPTVHSAPASDCSEGLRSDLFWTQLGLSSEPFGPNGKIAGDLNSTCPPPPLFPRYPLQSLRADKSSYKGGSSYPPCICKSNTSKPENLSHYPVQSLQADRSFKGGRYFPPCTCKNNTSKPDNLSPVGLYGPYSEGSSCNRCPYRDLSDKHESMAQHTLHRWMQCDDCGVTPIAGSRYKSNIKDDYDLCSTCFSRMGNVNEYTRIDRPSFGSRRFRDLNQNQMLFPHLRQLHDCCFIKDITVPDGTVMAPSTPFTKIWRIHNNGSSMWPYGTCLTWVGGHLFARNSSVKLGISVDGFPIDQEIDVGVYFVTPAKPGGYVSYWRLASPTGQMFGQRVWVFIQVEHPGKTSSNKQSAAINLNIPPEGSNTEWKHSVDTNIQSADIVDEYSGSTITDRLAHTLYHEATKPMEPELVSSGAPSVPRAFESVLVPATDLLTSSAGAEKALKPAAVPAPAPQAIPLPKPVSIPASGPAPAPVSATTAAPIGAAAAPISEPTAPAAAIGMPSATARAASRLPTEPSSDHISAVEDNMLRELGQMGFGQVDLNKEIIRRNEYNLEQSIDELCGILEWDALHDELHELGI</aaseq>

Gene Sequence

<dnaseqindica>1..63#1042..2423#2530..2644#2740..2952#3054..3203#3294..4007#4098..4106#ATGTCTCGCCGCCAGGACGCTGCGCCGACGGCGCGCGAGGGCGGGAGGGATCTCGTCGTGAAGGTGAGGTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTATTTCCCCGGCTCCTCGCGGATGCGGTGTTTCTGTGCTGGGAATGCCGCGTTCTTGGTTTGCTCGCGCATGGGGGTTTTGTCGCAGGGAGGTGGGGAGTGGGTTCTGTTGCCCGTGCTGGGTTGTGGAGCGATGCGACCGGGTGGTAGTGTTGTTCTTGGAAGGATGGATTTTGCATCTCGCTGGGTGCATGTAGGTTTACGATGGTTTTGATCTTGTTCGCCGAAGGATGGATTTTGCATCTTTTTGGGCGCCCAGGATTAGATCGTTTCTGTGTTGTTTGCAATTGTGAAACAGTGTATATCGGTCCTTAACGCGGCGATTTTTGTGAGGACTCCTTCGACATCAAGATTATTGCAGGGATTGTAAAATAGTGTAGAAATATCAGTCCTTAACGCTGGCGATTATTGTGAGGACTCCTTCGAAATCAAGATTATTGCAGGGCTTTTTGTTTTACTGATTAGTTAGATAAGAGTACTTGCTTTGGGGATTTGATTGTGGAGTATCTTGATCACTTGATGTATGTTCCTTTGTAATTTGTTGGTATGTTGAATGTTCCAGGTTTGCATGCTATGGTAGAATAAATCTGTTTAGGTTTGCATGATATGGCTGTATAAATCTCTTCAGTGTAGAAGACAACCCACTTTCCTCAACATGCAACGGCTTAACTTGGTAGTCATCCTTAATTGATTAATGCCATGTAATTTTGGTACTTATGTAGCATCAGGTGTTGAGATTTGGTTCCGTGAATTGTGTTTTGACTCTACTGTTAACTGAATCAACATTGATCAGCTGCTAAGATAAGAACAGAATTGAGTTATCATTTGCTTATGCTTCTTGCCTGCAAAGCAAACCACTTGCTGTTCTATTTAAGTTTACCTGTGCAATTTAACTAGATTGTTATTCTTATCTATCTCATTTTATTTGCTTGACGTTTCAGGTAAAATTCGGTGGCACTCTTAAGCGGTTCACTGCTTTTGTGAATGGTCCGCACTTTGATCTTAATCTGGCTGCTCTGCGGTCAAAGATTGCAAGTGCTTTTAAGTTCAATCCAGATACTGAGTTTGTACTCACCTATACTGATGAGGATGGGGATGTTGTCATACTGGATGATGATAGTGATTTATGTGATGCTGCCATTAGTCAGAGACTGAACCCTCTTAGGATTAATGTTGAGTTGAAGAGCAGCAGTGATGGGGTACATCAGACAAAACAGCAGGTATTGGATTCCATATCTGTAATGTCCACTGCTCTGGAAGATCAATTGGCTCAGGTGAAATTAGCTATCGATGAAGCTTTAAAATTTGTACCAGAACAAGTTCCCACTGTCCTTGCAAAAATATCACATGACTTGCGTTCTAAAGCTGCATCATCAGCGCCATCATTGGCTGATTTGCTGGACCGGCTTGCTAAACTGATGGCACCAAAGAGCAAAATGCAGTCTTCCAGTGGTTCTGCTGATGGTTCATCTGGCTCCTCTAGTGGTAGGGGACAAACTATGGGAAGGTTGAATATTAAAAATGACACTGAGCTCATGGCTGTTTCAGCTTCGAACCCTCTGGATATGCATAACTCTGGATCAACTAAATCACTTGGTCTTAAGGGTGTGCTTCTTGATGACATCAAAGCTCAAGCTGAACATGTATCGGGATATCCTTATTATGTGGATACCCTTTCAGGCTGGGTAAAAGTTGATAACAAAGGAAGTACCAATGCCCAAAGTAACTGCAAGTCTGTTACATCCTCTGCTGTGCCACAAGTTACTAGCATTGGTCATGGTGCACCTACTGTTCATTCTGCTCCTGCTTCAGATTGCAGTGAAGGGTTAAGAAGTGATCTTTTCTGGACACAACTAGGCCTTTCTTCTGAGCCCTTTGGGCCTAATGGCAAGATTGCTGGTGATTTGAACTCGACATGCCCTCCTCCACCACTGTTTCCCCGTTATCCACTTCAGTCTCTCCGAGCTGATAAAAGCAGTTACAAGGGTGGTTCCTCTTACCCTCCATGCATCTGCAAAAGTAACACATCTAAGCCAGAGAATCTCTCCCATTATCCAGTTCAGTCCCTCCAAGCTGACAGAAGCTTTAAGGGTGGTCGCTATTTCCCTCCATGCACCTGCAAAAATAACACATCTAAGCCAGATAATCTTTCACCAGTCGGTCTTTATGGACCTTATTCTGAAGGCAGCAGCTGTAATAGGTGCCCATACAGGGATCTCAGTGATAAGCACGAGAGTATGGCACAGCACACACTGCATAGATGGATGCAGTGCGATGACTGTGGGGTCACACCTATCGCTGGTTCTCGCTACAAGTCAAATATGTGAGTTTTGAGTTCAATGGTTCTAGTTCATCATCGAAAGTTGAATTGGAATGGAAGGAAAAAAATTGTCATTATTCTAACATGATTTGTTGTTTTTTGCGTGCAGTAAAGATGATTATGATTTATGCAGCACCTGTTTTTCTCGAATGGGCAATGTGAATGAATATACCAGAATAGACAGACCATCTTTTGGGAGTAGACGATTTAGAGACCTCAACCAGGTGAAAGTAGCAACTTGTTCAAATTCATGATCATATAGTTCTCGTAAAACATTTCCAGAACAGTGTCAACTGACTGTCATCTGGCCATTTTTCAGAACCAGATGCTCTTTCCACATCTTCGACAGCTACATGATTGCTGCTTCATTAAGGATATTACTGTCCCTGATGGCACAGTAATGGCACCATCAACCCCATTTACGAAGATTTGGCGCATACATAACAATGGATCTTCCATGTGGCCATATGGGACGTGTCTTACCTGGGTTGGCGGACATCTATTTGCACGCAACAGCTCAGTTAAATTAGGGGTACACCCTAGCCTTTTCGTATTTAGTATAACTACCAATGTATGGTCAAGAGTGTTAGGCAGTATCGCACTAAAATGTTAACTCTGATTCGGCATGTGCAGATCTCGGTGGATGGTTTCCCTATTGATCAAGAGATCGATGTTGGTGTTTATTTTGTCACACCTGCAAAGCCTGGTGGGTACGTGTCGTACTGGAGATTGGCATCACCCACTGGCCAGATGTTTGGTCAGCGAGTTTGGGTTTTTATTCAGGTTTGTTCCACCATAGATTGCTTTTTCGTCCTCATTGGCTTTGGCACTTCCTTTGTTATCTGATCATTTGGATTCCAAATTCATGTGCAGGTGGAACACCCGGGCAAAACCAGTAGCAACAAGCAGAGTGCTGCTATAAACTTGAACATACCCCCAGAAGGAAGCAACACAGAATGGAAGCATTCTGTTGATACGAATATTCAGTCTGCAGATATTGTGGATGAATACTCTGGAAGCACCATAACTGATCGTCTTGCACATACACTATACCATGAAGCCACCAAACCGATGGAACCTGAGCTTGTTTCAAGTGGCGCACCTTCTGTACCTAGAGCATTTGAATCAGTGCTAGTGCCAGCTACTGATCTCCTCACTTCATCTGCTGGAGCTGAAAAGGCTTTGAAGCCTGCTGCCGTGCCTGCACCTGCACCTCAAGCCATTCCCCTGCCAAAACCTGTTAGCATTCCTGCATCTGGACCTGCGCCTGCTCCTGTTAGTGCGACTACCGCTGCACCTATCGGAGCTGCTGCTGCTCCTATCAGTGAGCCCACCGCACCTGCTGCTGCCATTGGAATGCCCTCTGCAACTGCTCGTGCTGCTTCTCGCCTGCCTACCGAGCCTTCATCTGATCACATCAGTGCCGTGGAGGACAACATGCTGAGAGAGCTGGGGCAGATGGGCTTTGGGCAAGTCGACCTGAACAAGGAAATAATTAGGCGGAACGAGTATAACCTGGAGCAATCCATTGATGAACTCTGTGGCATCCTCGAATGGGATGCACTCCATGATGAACTGCACGAACTGGTAAGTTTAGGATGTCTTATTCCTATGCACCATATTTTGCCATTGCAGGTAAGAGTTACTCTGAACCTTTGCTTCTTATTTCCCCATCAGGGCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014885