BGIOSGA014886

From RiceWiki
Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014886| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014886, complete gene.| tag = OSIGBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014886

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014886, complete gene.

LocusTag

OSIGBA0106G07.12

Ensembl Transcript ID

BGIOSGA014886-TA

Ensembl Protein ID

BGIOSGA014886-PA

Length

5922

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22205851..22211772

Sequence Coding Region

22211658..22211772,22210654..22210791,22209506..22209615,22209119..22209424,22208727..22208839
,22208286..22208616,22207975..22208190,22207655..22207891,22207221..22207406
,22206854..22206994,22206290..22206558,22206122..22206203,22205851..22205970

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22205851..22211772 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22205851..22211772 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCTCGGGCGATGATCCCCGCGTCGCCGCGGCGGCCGGGGGTGGCGGCGGCGCCGTGATGGAGGAGATCGCCGCCGCGGTCCAGCCCACCACCGCGAAGGTCTCCTCGAAAGGGAAACGAGTAAAATGTCTGAAATGGATAACGATGCCCGTACAGCGATGGACCAATAGGCTTGTTGACTATGTGAATCATGGGGCCATCAGCAATATGGAATCTGCACTTTATCTGTATGCGCCACTAGGCACTGGTCGGATACCTATAATGACCAGAGCCCAGAGAAGCCACCCTTTAGATCCATTATCTGCTGCTGAAATTGCAGTGGCTATAGCAACTGTAAGAGCTGCTGGAAAATCGCCTGAGGAACGTGATGGCATGCGTTTTGTTGAAGTGGTGCTATTGGAGCCAGAAAAGAATGTCGTGGCATTAGCTGATGCCTACTTTTTCCCACCATTCCAACCATCACTGCTTCCTAGAACCAAAGGCTCTGCTGTCATTCCAAGCAGGTTGCCCCCTAGGAGGGCCAAGCTCACAGTCTACAATAGACAATCAAATGAGACTAGCATTTGGATAGTAGAACTCTCTGAGGTGCATGCGGCTACTAGGGGTGGACATCACAGAGGGAAAGTGATATCATCTGAAGTTGTTCCAGAAGTTCAGCCTGCAATGGATGCTATGGAGTATGCTGAATGTGAAGCTACTGTCAAAAGCTATCCTCCATTTATTGAAGCTATGAAGAGAAGAGGTGTAGATGACATGGAACTTGTCATGGTAGATGCCTGGTGTGCTGGCTACTACAGTGATGCTGATGCTCCCAGCCGCAGACTTGGCAAGCCTCTAATCTTTTGCAGAACTGACAGTGATAGTCCCATGGAGAATGGTTATGCACGTCCTGTGGAAGGGATCCATGTTATTGTTGATATGCAGAATAACGTTGTCATAGAATTTGAAGATAGGAAGTTGGTTCCTCTCCCCCCACCAGATCATCTGAGAAACTACACTCCTGGGGAAACGAGAGGTGGTGTTGATCGAAGTGATTTGAAACCTCTTATTATCAATCAACCTGAGGGCCCGAGCTTCCGCATTAACGGATATTTTGTGGAATGGCAGAAGTGGAACTTCCGTATTGGCTTCACCCCTAAAGAGGGTTTGGTCATCTATTCTGTTGCATATGTTGATGGCAGCCGTGGACGTCGGCCGATAGCTCATAGGCTCAGCTTTGTTGAGATGGTTGTTCCTTATGGAGATCCCAATGAACCACATTATCGCAAGAATGCTTTTGATGCTGGAGAAGATGGACTTGGGAAGAATGCTCATTCTCTTAAGAGGGGATGTGACTGTTTAGGTTTCATAAAGTATTTTGATGCACACTTCACGAATTTTACGGGTGGTGTGGAAACAATTGAGAATTGTGTATGTTTGCATGAGGAAGACCACGGAATCCTTTGGAAACACCAGGATTGGAGAACTGGTTTAGCAGAAGTTAGGAGGTCAAGGAGGCTTACTGTTTCATTTATCTGCACAGTTGCCAACTATGAATATGGTTTTTACTGGCACTTTTATCAGGATGGCAAGATAGAAGCAGAAGTAAAACTTACTGGAATTCTTAGTTTGGGAGCTCTGATGCCTGGGGAATCAAGAAAATATGGTACAACCATTGCTCCTGGTCTGTATGCACCTGTTCACCAACACTTTTTTGTTGCCCGTATGGACATGGCTGTTGATTGTAAACCTAACGAGGCTCATAATCAGGTGGTTGAGGTAAATGTGAAAGTTGAAAATGCAGGCACACATAATGTGCACAACAACGCTTTCTATGCCGAGGAAAAACTACTGAAATCTGAGCTGCAAGCAATGCGAGATTGTGACCCTTCATCTGCACGGCATTGGATCGTAAGGAACACAAGGGCTGTTAATCGTACTGGGCAGCCAACCGGCTACAGGCTCGTGCCTGGTTCAAACTGTTTGCCGCTGGCTCTACCCGAGGCAAAGTTTCTGAGGAGAGCGGGTTTCCTGAAGCACAATCTCTGGGTCACGCAGTACAAGAGCGACGAGGTGTTCCCTGGAGGGGAGTTCCCCAATCAGAATCCACGTATCCACGAGGGCTTAGCTACCTGGGTCAAGAAGGATAGGCCCCTGGAGGAAACTGACATTGTTCTCTGGTATGTGTTTGGGCTCACCCATATCCCAAGGCTGGAGGACTGGCCTGTCATGCCAGTGGAACGCATCGGCTTCATGCTCATGCCACATGGGTTCTTCAACTGCTCGCCGGCGGTCGACGTGCCTCCCGGCTCCTCCGACGCTGACATCAAGGAAGCCGAGTCGCCCAAAGTCATCCAGAACGGCCTCATCTCGAAGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MVSGDDPRVAAAAGGGGGAVMEEIAAAVQPTTAKVSSKGKRVKCLKWITMPVQRWTNRLVDYVNHGAISNMESALYLYAPLGTGRIPIMTRAQRSHPLDPLSAAEIAVAIATVRAAGKSPEERDGMRFVEVVLLEPEKNVVALADAYFFPPFQPSLLPRTKGSAVIPSRLPPRRAKLTVYNRQSNETSIWIVELSEVHAATRGGHHRGKVISSEVVPEVQPAMDAMEYAECEATVKSYPPFIEAMKRRGVDDMELVMVDAWCAGYYSDADAPSRRLGKPLIFCRTDSDSPMENGYARPVEGIHVIVDMQNNVVIEFEDRKLVPLPPPDHLRNYTPGETRGGVDRSDLKPLIINQPEGPSFRINGYFVEWQKWNFRIGFTPKEGLVIYSVAYVDGSRGRRPIAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKRGCDCLGFIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALMPGESRKYGTTIAPGLYAPVHQHFFVARMDMAVDCKPNEAHNQVVEVNVKVENAGTHNVHNNAFYAEEKLLKSELQAMRDCDPSSARHWIVRNTRAVNRTGQPTGYRLVPGSNCLPLALPEAKFLRRAGFLKHNLWVTQYKSDEVFPGGEFPNQNPRIHEGLATWVKKDRPLEETDIVLWYVFGLTHIPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPGSSDADIKEAESPKVIQNGLISKL</aaseq>

Gene Sequence

<dnaseqindica>1..115#982..1119#2158..2267#2349..2654#2934..3046#3157..3487#3583..3798#3882..4118#4367..4552#4779..4919#5215..5483#5570..5651#5803..5922#ATGGTCTCGGGCGATGATCCCCGCGTCGCCGCGGCGGCCGGGGGTGGCGGCGGCGCCGTGATGGAGGAGATCGCCGCCGCGGTCCAGCCCACCACCGCGAAGGTCTCCTCGAAAGGTATTCGGGGATCTCCACCCTTCTCTCTCTCTCGATTGAGTTGGATTGGGCATTTTGCGCTATTTTGCTGGTGATGCGTGGTGGATTTGTGTGAGTGGTTGGCGATTGGGTCATGGGAAATGTTGCGGAAGTGCCGTGCCGTGCCGTGCATGGGTCGTAAAAGACAGTAGGATAAGGACGTGATTACGTGACAGTGGTATTCGTGGAGAACTCGAGATCATGATTTCCTCGCGAGCTCAGGTGTGAGTTCGGGAAATGTAGTCAGTTGGTTTTATGCAAAGTGCATAGTTCTGGACTTCTCGTGCTCATGCAAGTAGAGGATGCAGATTTATTTATTTGCGCGTACGATCGGACAGTTCTCGTTACGTACGTTTGCTCAATCGTAGTTCTCGATCGATGCATGCATGCAGAGTATGCAGATTATAGCTTGCGAACTGTTCATATGTATTTGTTTAGATCTATAGGTGCACTAAATCATTAATCTGCCTTAAACAAATTATCAATTAAAAAGAGGTTGTCCCCCGCAAAGAAAAAATTAAGAAGAGGTTGTCCCCACTCCATGTCAACATCATTGGTGAATGGATCATGGGGGCATGACGTGATGTTGCGACACCTACTTGTGGGACTTGCTGTCACATATCTTCCGGTAGTCCGGGCTTGTTGTTTACTGTTCTGGCTTTCTGCTTTGTCGTCGTGCGTTGCAACCTTCAACTTTTTCTTTGATCACTAGTAGCAGCGATCGCTTCTATCTTTCTTCTTCCATGGTTTTTGGTTGATGGTGAGTTTTGATATGGGAAACAAGGAAAATGTCTGAATATGGATAATGATGTCTGTTTAGTGATGGGCCAATAAATTCTTTGATATAGGGAAACGAGTAAAATGTCTGAAATGGATAACGATGCCCGTACAGCGATGGACCAATAGGCTTGTTGACTATGTGAATCATGGGGCCATCAGCAATATGGAATCTGCACTTTATCTGTATGCGCCACTAGGCACTGGTCGTAAGCTGATCATGCAGGCTGGTCCACGGGGCCATCACAAAGTAGTAATGCTTGCGGGATGCTGAAGAAGTGCAGTGTACGTAAGTTGAACACTTAATTTTTGTGTAGCAAACCCCAAATAGGCTTTCCTTTGAAACTCACTGGGCACGATCTTCTATTCTTTGCCGGGATGGCCGTAGAAAAGGCCATCCAAATGTTATTAAGATTCTGAGCATAATCTTCGATTCTCATCTCATCCAAAATATCGTTACGCATTAGACAAATTCTGCTTCATAGTTTATAAGCTAAAAAGACAGACAGACAGTCATTTTCAGTTTTTTGAACAGATATACTTTCTGAAAACGGTTGAACACTGGTGTAATACTTCACCTGATGTTGGCAGGGGTTACTGAGAAGAATTATTAGTCTCTTAAGACTCTACCTCGTCAAATTTAACTTCAAAATAGATCGTGCCTTCCTAATTTTAACTGTGTTACATGAAGGGATGATTTACAGTAATGCAGTTGATACCCCTACGTGTTCGTCTAATTAGATCAAACAATTCTCCAATCATGTCTATGTGGTGTATAAATAAGGGACTTTATTTCCTGTTAACAACTAGATCTAAGATGGGGGACATAAGTTGATAGAACAATAATGAATATATCTGCACTGTAATGTACTAAGATTCATGTCACCGCTGCTTTGTTTATCTGTATCTTCAGATAGGTCAACAACTGCTTTTTTATTAACTATTATGTATTGCTTCTATTCGTTCAAAAAAAAATATGTATTGCTTCTTTAGCCTTCCTGATAAGCACATCTAGCATGGTCTACTTGACCTGCCAAATTATCTATTATCGATTGTTGACCTATGTTATTGAAGAGGTCTGTATGTTCATGCAGGAGTTTGGTTATTTGTTGTTGGTCTATGCATGTATATTTTTGTAATTTCTTGGAAGTTGTTTGAGTGACCTGTTCAGCATACATGTCTTAATTGAATTATATTCATTATTATTACCCGTTTCTAATGTTCTGCTGGATGGAACAAAATGGCAGGGATACCTATAATGACCAGAGCCCAGAGAAGCCACCCTTTAGATCCATTATCTGCTGCTGAAATTGCAGTGGCTATAGCAACTGTAAGAGCTGCTGGAAAATCGCCTGAGGTTCGTCAAAATAATATTCCATGTACTTTTGTCTACAACCTCAAAAAAAAGGAGCTGACATAGAGGTTTCTGAATTTGCAGGAACGTGATGGCATGCGTTTTGTTGAAGTGGTGCTATTGGAGCCAGAAAAGAATGTCGTGGCATTAGCTGATGCCTACTTTTTCCCACCATTCCAACCATCACTGCTTCCTAGAACCAAAGGCTCTGCTGTCATTCCAAGCAGGTTGCCCCCTAGGAGGGCCAAGCTCACAGTCTACAATAGACAATCAAATGAGACTAGCATTTGGATAGTAGAACTCTCTGAGGTGCATGCGGCTACTAGGGGTGGACATCACAGAGGGAAAGTGATATCATCTGAAGTTGTTCCAGAAGTTCAGCCTGCAATGGTATTGCCTAAAATAAATTTGTTTAGTTTTTTTTCCTTCCTTTGATTGTTTTGTCCCAATTTTCCAATCATTTAGTCTGCATTGCTTGTAGAACATGATTTCTTAGTTTTCCAGTATTTATGCTTGCATTACAGCTTGAATTGTTTGCTGTCATTGCTTTTAGGACACAATTTATTAGTTTTCCGATATTTATGCTTGTATTACAGCTTGAACTGTTTTTTCTTTTGAAGTTTTTTAGAACCTTTTGGAGCGCTCAGTTCAAATTTCTATATTTCACAGGATGCTATGGAGTATGCTGAATGTGAAGCTACTGTCAAAAGCTATCCTCCATTTATTGAAGCTATGAAGAGAAGAGGTGTAGATGACATGGAACTTGTCATGGTAGATGCCTGGTAAGCTAAGCTTCAGGAAACTTCTTTTGTTTCATATCTCATAGCTGGCTTTGTTGTCTTAGAATCATCATATGGAAAATGATAATGTGAACATTGTTCTAAATCATCAGGTGTGCTGGCTACTACAGTGATGCTGATGCTCCCAGCCGCAGACTTGGCAAGCCTCTAATCTTTTGCAGAACTGACAGTGATAGTCCCATGGAGAATGGTTATGCACGTCCTGTGGAAGGGATCCATGTTATTGTTGATATGCAGAATAACGTTGTCATAGAATTTGAAGATAGGAAGTTGGTTCCTCTCCCCCCACCAGATCATCTGAGAAACTACACTCCTGGGGAAACGAGAGGTGGTGTTGATCGAAGTGATTTGAAACCTCTTATTATCAATCAACCTGAGGGCCCGAGCTTCCGCATTAACGGATATTTTGTGGAATGGCAGAAGGTGCATTGTTGTGTAAAGCTTTTCTCTATTATGATGAGATAAACAAAAAAATATTTCCCCCTGGAATTAATAACACTTTTAATGATGTTGAGCAGTGGAACTTCCGTATTGGCTTCACCCCTAAAGAGGGTTTGGTCATCTATTCTGTTGCATATGTTGATGGCAGCCGTGGACGTCGGCCGATAGCTCATAGGCTCAGCTTTGTTGAGATGGTTGTTCCTTATGGAGATCCCAATGAACCACATTATCGCAAGAATGCTTTTGATGCTGGAGAAGATGGACTTGGGAAGAATGCTCATTCTCTTAAGAGGGTGCTTGCTCAGTTCTTAATGATTTTTTACCTCCAGAGAGTTTTAACTTTCATCTGACTATTATATGCCTTTTTTTTTTGTAGGGATGTGACTGTTTAGGTTTCATAAAGTATTTTGATGCACACTTCACGAATTTTACGGGTGGTGTGGAAACAATTGAGAATTGTGTATGTTTGCATGAGGAAGACCACGGAATCCTTTGGAAACACCAGGATTGGAGAACTGGTTTAGCAGAAGTTAGGAGGTCAAGGAGGCTTACTGTTTCATTTATCTGCACAGTTGCCAACTATGAATATGGTTTTTACTGGCACTTTTATCAGGTAATTGTTTCAACTGACTATTCCTTATAATGCCCTCAGCGATTAAGCTGTAACCTATAAAGGCTGATATTCCTTCTGTAGCTTTTGGTACGGTTATGCATGAATTATTTCCGATTTGGCTGTTGCAAACATCATGAGATAGTGAATACATATTTGAATTTAGTTCCTTAATGAATTTTTTGATGCTTTAATTTTCTGCTACCACATATTTTGCAATATAATTTATTTGTTCATTCTGTTGGATATAGGATGGCAAGATAGAAGCAGAAGTAAAACTTACTGGAATTCTTAGTTTGGGAGCTCTGATGCCTGGGGAATCAAGAAAATATGGTACAACCATTGCTCCTGGTCTGTATGCACCTGTTCACCAACACTTTTTTGTTGCCCGTATGGACATGGCTGTTGATTGTAAACCTAACGAGGCTCATAATCAGGTGGGTTGCTTTTTATGCATTTCAATTAAAGTTTTGCTGGATATACTGAATAGAAGTTTTCCACCTAGTTCCACAATAAGGCCTATCATAATGTTACTTTGATTTAGACCTGCTGTTTGTGCAAGTAACTTGTCTACAGTGGGTGAAGTTTAGTTCTAGTAGTAGTAGGGCCTTTTGCTTGAACTTGGCATGTATTGATAGTCTGATATGTTGCTTTCTATCACAGGTGGTTGAGGTAAATGTGAAAGTTGAAAATGCAGGCACACATAATGTGCACAACAACGCTTTCTATGCCGAGGAAAAACTACTGAAATCTGAGCTGCAAGCAATGCGAGATTGTGACCCTTCATCTGCACGGCATTGGATCGTAAGAGCATCATCTTTCAGTATCATCCCTTTTATATTGTGCTGGTGTTGATGTACCATGATAACGTTTCCAGTACCTGGTCATTGTTTTCTTTCTTCAGAAATGACGCATTGACTTGCTGCTTTATAGCAGTGCTATTATTTTGCACTTATTAGCTGCATTACTCTTGACCTAATAACAGATAGCTTAGGCCACAACTCTAACTCTCAGAGTAAAGAACATTATTTTGTGTTGTGGCAGCTGATCATACATACCGATCTTTCTTTCCTACCTAACATTGTTGACATCTGATCAGGTAAGGAACACAAGGGCTGTTAATCGTACTGGGCAGCCAACCGGCTACAGGCTCGTGCCTGGTTCAAACTGTTTGCCGCTGGCTCTACCCGAGGCAAAGTTTCTGAGGAGAGCGGGTTTCCTGAAGCACAATCTCTGGGTCACGCAGTACAAGAGCGACGAGGTGTTCCCTGGAGGGGAGTTCCCCAATCAGAATCCACGTATCCACGAGGGCTTAGCTACCTGGGTCAAGAAGGATAGGCCCCTGGAGGAAACTGACATTGTTCTCTGGTATACTTGCTACTACGATGCATCTGTGTAACTTTCTTCGGTTCACGACTGGGAATATTGTTGTTAACTATACACTGCATCTGCAGGTATGTGTTTGGGCTCACCCATATCCCAAGGCTGGAGGACTGGCCTGTCATGCCAGTGGAACGCATCGGCTTCATGCTCATGGTAAATACCTTCTTTTTTTTTTTTAGAACAAAGACCTTCTCTTGTAGCCTTTCATATCTCCTCTTTGGCAGACGACTTCTCTAGTTTCCACCGTTCTGGTTTTTACAGTATCAGCTCAAAGCCTGTTTGTGTCTTGTTTAATTCTTTTCAGCCACATGGGTTCTTCAACTGCTCGCCGGCGGTCGACGTGCCTCCCGGCTCCTCCGACGCTGACATCAAGGAAGCCGAGTCGCCCAAAGTCATCCAGAACGGCCTCATCTCGAAGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014886

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA014886&oldid=63780"