BGIOSGA014887

From RiceWiki
Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014887| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014887, complete gene.| tag = OS04G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014887

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014887, complete gene.

LocusTag

OS04G0475800

Ensembl Transcript ID

BGIOSGA014887-TA

Ensembl Protein ID

BGIOSGA014887-PA

Length

2384

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22189825..22192208

Sequence Coding Region

22191033..22192208,22190590..22190957,22190443..22190476,22189825..22189905

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22189825..22192208 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22189825..22192208 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTCGCCTCATGCCGCCGCGTCCGCCTGCGCTTCCGCTCCGCTCTCGCCACCGCCGCCGCCTCCCCCGTCGAAGCTTCCATTTCCACCTCCGACTCCGACGTGGACCCCGAATCCCACGGCCCCGCGGATGCCACGCTCCTCCGCCGCCGCATGCGGGCGTCGGCCGCCGAGGGGAACCTGGCCGCGGCGCTGGACGCGCTCGCCCTCCTCCGGCCCGCGCCCGCAGGCGCCCACGACTACAACGCTCTCCTCCACGCCTACCTCCGGTCCGGGCAAGCCGCCGCGCAACACGTCGCCGCCGCGGAGCATGTAGCCGCCGTGCTGTGTCACATGCGCTCCGTCGGCCCGGCGCCCAACGCCCTCACCTTCAATACCGCCTTCAACGGGCTGCTCCGGCTAGGCCACCTCGACGCCTCGCACGCGGTACTCGAAGAGATGTGGTCTCGCTGCGGATTCGTGCCTTCGTTCACCACGGTGGATAGACTCATCAAGAAAGCTGTTAGTGGCTCTAACTTTGAACTTGCACTGAAGGTGTTCGACCTAATGCTCAGTCTGTGTTACTTTCCGACTCTCCCTATCGCCAATGCCATTGTCTCGATTCTATTGAAAAGTGGCAGCGCTGAGATTGCATATGAGGTTTTCATGGTGCTTGTAAATAGGAAGTTTGTGCCAGATGTGTATATGTACAACCAAATTCTGTTTGGTCTTTGCAAGTCAGGTTGCAGCAATAAGGCATTGACTCTGTTCTGTAACTTGAAGAAGAGAGGACTCTCTCTAAACGTTTATTCGTATACAGCATTGGTCTTAGGATTATGCAAGGAGAAGATGTGGGCCGACGCATACAGGACATTGGAGAAGATGTGCGATGAAGAGTGCAAACCCTCTGTTGTAACATATACCGTAATTGTGAATTTCCTCTGTAGAGATGGTAAGATTGATGCTGCGATGCATGTTTTCAGGATGGCATGCAAAAATGGCTGTTGTCTTGATAGCACCATATGCAATGTGCTACTCCATGCACTCTGCTGTGAAGATAGAATACCAGAAGCTCAGGTGATTGTTGATTTGATGGAGGAGGCAGGATTGGTCCCTGACTATTTCACCATTTCTTCTCTGGCTGCTTGCTTTCTGAAAACTGGGGATGTCATGACCTGTCAGAATTTTATACGAATGGTTAAGAAAGCATTAGCTTTGGTTAGTGGAATGATGGAGAGAGGACTTGTACCATCTACTACAACATATAACACTATACTGAAAGGCTTCTGTATGGAGCTGGATCTTCAGGGGGCATTGCAGATGTTGGACCATTTTAGCTCTACTGGTGTTCCCTGTGATTCAGTCTCCTTCAACACTATCCTCTCTGCAGCCTGCAGGCAGCAGAATGCTTCAGTTATCCGTATGGTTCTCTATCGTATGCATGTGGAAGGAATCAACCTTGATGCCATCAGTATGACATGCTTACTCCGGTACTTTCACAAATGTGGGAAGTTTGCTGAAAGTGTTAACCTTGTTGAGAGTCTGCGAATTCAGGGCAGCCTACTGAAGTCAGATTATTGGGCTCAGTTGGATGTCAAGTCAACAAATTGTGGAGCATTTCATGAAGGCTTGAAGGTTGAAGAGAATGGTGAAGAGCTGCCGGATCCTTGGGTAGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MLASCRRVRLRFRSALATAAASPVEASISTSDSDVDPESHGPADATLLRRRMRASAAEGNLAAALDALALLRPAPAGAHDYNALLHAYLRSGQAAAQHVAAAEHVAAVLCHMRSVGPAPNALTFNTAFNGLLRLGHLDASHAVLEEMWSRCGFVPSFTTVDRLIKKAVSGSNFELALKVFDLMLSLCYFPTLPIANAIVSILLKSGSAEIAYEVFMVLVNRKFVPDVYMYNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRTLEKMCDEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCEDRIPEAQVIVDLMEEAGLVPDYFTISSLAACFLKTGDVMTCQNFIRMVKKALALVSGMMERGLVPSTTTYNTILKGFCMELDLQGALQMLDHFSSTGVPCDSVSFNTILSAACRQQNASVIRMVLYRMHVEGINLDAISMTCLLRYFHKCGKFAESVNLVESLRIQGSLLKSDYWAQLDVKSTNCGAFHEGLKVEENGEELPDPWVG</aaseq>

Gene Sequence

<dnaseqindica>1..1176#1252..1619#1733..1766#2304..2384#ATGCTCGCCTCATGCCGCCGCGTCCGCCTGCGCTTCCGCTCCGCTCTCGCCACCGCCGCCGCCTCCCCCGTCGAAGCTTCCATTTCCACCTCCGACTCCGACGTGGACCCCGAATCCCACGGCCCCGCGGATGCCACGCTCCTCCGCCGCCGCATGCGGGCGTCGGCCGCCGAGGGGAACCTGGCCGCGGCGCTGGACGCGCTCGCCCTCCTCCGGCCCGCGCCCGCAGGCGCCCACGACTACAACGCTCTCCTCCACGCCTACCTCCGGTCCGGGCAAGCCGCCGCGCAACACGTCGCCGCCGCGGAGCATGTAGCCGCCGTGCTGTGTCACATGCGCTCCGTCGGCCCGGCGCCCAACGCCCTCACCTTCAATACCGCCTTCAACGGGCTGCTCCGGCTAGGCCACCTCGACGCCTCGCACGCGGTACTCGAAGAGATGTGGTCTCGCTGCGGATTCGTGCCTTCGTTCACCACGGTGGATAGACTCATCAAGAAAGCTGTTAGTGGCTCTAACTTTGAACTTGCACTGAAGGTGTTCGACCTAATGCTCAGTCTGTGTTACTTTCCGACTCTCCCTATCGCCAATGCCATTGTCTCGATTCTATTGAAAAGTGGCAGCGCTGAGATTGCATATGAGGTTTTCATGGTGCTTGTAAATAGGAAGTTTGTGCCAGATGTGTATATGTACAACCAAATTCTGTTTGGTCTTTGCAAGTCAGGTTGCAGCAATAAGGCATTGACTCTGTTCTGTAACTTGAAGAAGAGAGGACTCTCTCTAAACGTTTATTCGTATACAGCATTGGTCTTAGGATTATGCAAGGAGAAGATGTGGGCCGACGCATACAGGACATTGGAGAAGATGTGCGATGAAGAGTGCAAACCCTCTGTTGTAACATATACCGTAATTGTGAATTTCCTCTGTAGAGATGGTAAGATTGATGCTGCGATGCATGTTTTCAGGATGGCATGCAAAAATGGCTGTTGTCTTGATAGCACCATATGCAATGTGCTACTCCATGCACTCTGCTGTGAAGATAGAATACCAGAAGCTCAGGTGATTGTTGATTTGATGGAGGAGGCAGGATTGGTCCCTGACTATTTCACCATTTCTTCTCTGGCTGCTTGCTTTCTGAAAACTGGGGATGTCATGACCTGTCAGAATTTTATACGAATGGTATGTAACAGGAGCAATCATGTGGATATTATCACTTGGAATATATACCTACATAGCTTATGCTGTGATGGGCAGGTTAAGAAAGCATTAGCTTTGGTTAGTGGAATGATGGAGAGAGGACTTGTACCATCTACTACAACATATAACACTATACTGAAAGGCTTCTGTATGGAGCTGGATCTTCAGGGGGCATTGCAGATGTTGGACCATTTTAGCTCTACTGGTGTTCCCTGTGATTCAGTCTCCTTCAACACTATCCTCTCTGCAGCCTGCAGGCAGCAGAATGCTTCAGTTATCCGTATGGTTCTCTATCGTATGCATGTGGAAGGAATCAACCTTGATGCCATCAGTATGACATGCTTACTCCGGTACTTTCACAAATGTGGGAAGTTTGCTGAAAGTGTTAACCTTGTTGAGAGTCTGCGAATTCAGGGCAGCCTACTGTTTGTGCATGGTACTTGAGGACATCAGCAAATTTTATGGTTGGTCTTCTCTTGTTGCTGGGCTAAGCAAGCTTGTAGGATTGTAGCATCCATTCTTTGGTTTGGCCTTAAAGGAAGTCAGATTATTGGGCTCAGTTGGATGTCAAGGTCTGTTGCGCTTGCAGTAATTCCATGGTCAATAATTTGATGATTAAGGTACTGTTCAGAACTTCAGATTACAGTTAATCTATGGTCATGCAGTTACCTGGTTGACCTTTTCCACACCCAATCCAAATAAAATTTCTAAATTTTATACCTGTTGATTGTACTGATCATATGATTGGGAAGATTAAGATTGCATATACACGGAGATTTATACTTCATTTGTGGTACTATTCTGCAACCAGTGGATATGCTCTTGACTGTTTTGGTACATCGTCCAATAATGACCAATAATTTGTGCAGTAATTATCTCATTGAACCATAGTCATTGAGTGGTGATATTTCAATTCCCAAACACCTAAAATTTTAGGTGCACCACCATTCCCCCCTGACATGTATTCTTTGTTGTTGAACTGCACCATCATCTCTTTAGCTCAAGTACTGTGGGCCATGAGGTTGATTTCAAAACTGCATGTTACATTTTTCAAGCTCATGTGGAGTATTTTTTTTTCTTCTTCTAAATTTCCTATTTCTAATCAACAGTCAACAAATTGTGGAGCATTTCATGAAGGCTTGAAGGTTGAAGAGAATGGTGAAGAGCTGCCGGATCCTTGGGTAGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014887