BGIOSGA014893

From RiceWiki
Revision as of 04:05, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014893| Description = Non-cyanogenic beta-glucosidase| Definition = Oryza sativa Indica Group BGIOSGA014893, complete gene.| tag = OSIGBA01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014893

Description

Non-cyanogenic beta-glucosidase

Definition

Oryza sativa Indica Group BGIOSGA014893, complete gene.

LocusTag

OSIGBA0135C13.7

Ensembl Transcript ID

BGIOSGA014893-TA

Ensembl Protein ID

BGIOSGA014893-PA

Length

5007

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22123815..22128821

Sequence Coding Region

22128663..22128821,22128284..22128353,22127284..22127342,22126959..22127034,22126688..22126765
,22126479..22126566,22125815..22126070,22125082..22125197,22124784..22125001
,22124541..22124572,22124348..22124450,22124076..22124184,22123815..22123983

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22123815..22128821 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22123815..22128821 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCAGCAGGGGCAATGCCCGGTGGCCTTCTCCTCACGTTCCTCCTCCTTGCTGTCGTCGCTTCCGGCGCCTACAATAGCGCCGGCGAGCCGCCGGTCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTCGGGACAGCCTCGTCGTCGTATCAGTACGAGGGTGGCGCAGCGGAGGGCGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGCACCCAGAGAAAATCGCCGACAGAAGCAACGGGGATGTGGCTTCGGATTCCTACCATCTCTACAAGGAAGATGTGCGCCTCATGAAGGATATGGGAATGGATGCATACAGGTTCTCCATCTCATGGACAAGAATCCTTCCAAATGGAAGTCTGAGGGGTGGAGTCAACAAAGAAGGCATAAAGTACTACAATAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCGTTTATTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAACGGATTTCTTAGCCCTAATATCATAAATGACTTTAAGGACTATGCTGAAATCTGCTTCAAGGAGTTTGGTGACAGAGTGAAAAATTGGATCACCTTCAATGAGCCTTGGACTTTCTGCTCTAATGGCTATGCAACTGGCCTGTTTGCACCAGGCCGTTGTTCGCCCTGGGAGAAGGGAAATTGCAGTGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCATCAACTACTTGCCCACGCGGAAACTGTTCGGTTGTACAAAGCGAAATATCAGGCCTTACAAAAAGGGAAGATTGGAATAACTCTGGTCTCGCACTGGTTTGTTCCCTTCTCCCGCTCCAAATCCAACAATGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTTTATGGATCCCCTCATTAGAGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAAGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCGAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCTCGAGCTAATCTTACCGGTGTACGAAATGGCATCCCCATAGGACCGCAGGCTGCTTCACCTTGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGTTACTTTATGTTAAGGAGAACTATGGCAATCCTACCGTCTACATCACTGAAAATGGCGTTGATGAATTCAACAATAAGACCTTACCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCTTTCCCTGCTAAGTGCTATAAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCTGCTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGATTACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCTCCTGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAGAMPGGLLLTFLLLAVVASGAYNSAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK</aaseq>

Gene Sequence

<dnaseqindica>1..159#469..538#1480..1538#1788..1863#2057..2134#2256..2343#2752..3007#3625..3740#3821..4038#4250..4281#4372..4474#4638..4746#4839..5007#ATGGCGGCAGCAGGGGCAATGCCCGGTGGCCTTCTCCTCACGTTCCTCCTCCTTGCTGTCGTCGCTTCCGGCGCCTACAATAGCGCCGGCGAGCCGCCGGTCAGCCGGAGAAGCTTCCCCAAGGGGTTCATCTTCGGGACAGCCTCGTCGTCGTATCAGGTTAAGCTTCCACTTCCCTTCCACTCCTACAGCAAAGAAAGCTTCCAGTTCCATGCATATGTAACTGTGCAGAAGAAATTCAGTTCTCTCATGAACAAAAAGGAAAAGGAGCAAAACTACAAACAGATTTGTGCAACTTTTCTCCACCGAGAATACGTTGGTACAGATTCACACAGAAAGGCAATGCTACTGGGTAATGCTCAAATTGGCACCAAGGAATGAATCGGTTGCTAAAATTTTAACTGTCACACTGAGACATGTTTTTGTCTTGGTCTGAAATCTGAGGAATTGGCTGTTCTTGAGATGCAGTACGAGGGTGGCGCAGCGGAGGGCGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGCACCCAGGCATGTTAATTGCATCTCTGCCTGCAAGCTGTGCTACGTACAGATTTGTTTTCTTTTCTTTTTTAGGATAACAAGTGCACATTCCCTAATTAAAAAAATTACATTCCCTAAAAGATAACAAGTGCAGACTTGTGTTAATCAACTTTAATTATGTGCATTCTATATATTCCATCCGTTTTTTAATAGATGACGCCGTTGACTTTTTCTCATATGGACCATTCGTCTTATTCAAAAATTTTATGCAAATGTATAAGATATAAATCACATTTAAAGTACTATGAGTGATAAAACAACTCATAATAAAATAAATTATAATTACGTAAATTTTTTTAATAAGACAAATGGTTAAATATGTGAGAAAAAATCAACGGTGTCATCTATTAAAAAACGGAGGGAGTATATCTCAACAAGAATGAAATCTGACCCTATTTAGCAATCCCAGCCAGTAGAAGTTGCATGCATACACTACACATATGGTACCATAGCAGTATCTGAAAAATTTACGCGCGATTATGTTCTGAGTATATTTTTTCCTGTTTGGTGGATTATCTATACAACTAGACCATCCTATCTTTGCGAATGGTCCAATATTTTGCTGTGAGCAAGATTTTTGCTCTTCCTACGATAGCTCAGCGGGTATCTTCAATCTTGACCTAGTAATCCAATCACGTCGCTTTTCAAAAAATCATCATCACAATTCAGACGATTGGTCTAAACAGTCACCATCTTCTCGAATTGCTTTTCGTCCAAATATTATTTCCTGCGCGTGGTTTACAAAAGAGGCCGTTGATATTCTTGTCCTACCTGGGATGTAATGTACTGAATAGTCTAAAGGGAAATGTAGAAATCAGGGGTAACTTAAGCACATGATTGATGTGAAATGATAAGAAATCAATGGACAAGGACAACATTTTTGGATTGACGATTATCTGATTTGGCAGAGAAAATCGCCGACAGAAGCAACGGGGATGTGGCTTCGGATTCCTACCATCTCTACAAGGTATATTAGCAGTTAGTACATTTTTCAAGTAGCAAACATGCATTTCTAATTGATTTTTCGTAATGATTGTAACTAAAAGTATACTCTGAGTCTTTAGTCAAAAAAAAAAAGTATACTCTGAGTCGTGTTAGATTGTTCTACTACAGCTAGGAGATATTGCCTATCACAATCTCTTCAAATTCTATTCTAAACTTCTTTTAAAAAAACAATTTAGTACTTATCCAGAGGTACTTGTGAAAAATAATGCAGGAAGATGTGCGCCTCATGAAGGATATGGGAATGGATGCATACAGGTTCTCCATCTCATGGACAAGAATCCTTCCAAGTGAGTGGCCATATCTTCCGACCTTCTACTTATTTCAAACCTGATACAATGCACTATCACAGAACTATCAGCAGACAGCTCTGGCTTATCTGAAGCTGATCAGCCTTTTTGTTCTGAAGTAGTACAATAATTTGCACATTGGTCATACTCCAAGTTGATGGCACCAAACATTGAAAATTCACTGTCATGGCAGATGGAAGTCTGAGGGGTGGAGTCAACAAAGAAGGCATAAAGTACTACAATAATTTGATCAATGAGCTATTATCGAAAGGTACGCATTTTCCAGTCTACAGTGTTTAGTTCCAAGTTCAGTGGCTAGATGCAAATTAGTTCCACTCCAGAAGTCCAGATATTCTTTTATTCAAGATGCAAATAACCTTATACATTTGCAGGGGTGCAACCGTTTATTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAACGGATTTCTTAGCCCTAATATCATGTATGTCAACAATTCTTCTGCTTCAATACATCACTAGTTATACCTTGATAGGTTGAAATGGAAACTGGTCAGGTTAATAAACAGACTCAGTAAGATAGGAGAGTGAAATTTAAACTAAATGTGACAACATCAATTAACCTGACCATCACTGTGCATACCCATTAAACTGCCGAAGACTCCTATTTCAATTTCATTGGCTTTTGGAGCTTTCTCCTCAATTTCCTTGTGAATAACACTAATTGAAGGTAAGTTGGGATGTGTTTTTCTTTCGACAGCATTAAACCCCTTTATTGGCACTTATGCCACCCATAGTAGTACTCTCTTCCTATACTATTTTCAGCTAAAATGTCAAGAGTTGCCTACAGTGAAAATTTTCTTATGTTTACTGTTTGTGAAAAACTGTTGCAGAAATGACTTTAAGGACTATGCTGAAATCTGCTTCAAGGAGTTTGGTGACAGAGTGAAAAATTGGATCACCTTCAATGAGCCTTGGACTTTCTGCTCTAATGGCTATGCAACTGGCCTGTTTGCACCAGGCCGTTGTTCGCCCTGGGAGAAGGGAAATTGCAGTGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCATCAACTACTTGCCCACGCGGAAACTGTTCGGTTGTACAAAGCGAAATATCAGGTCACTGAAGAATCCCTTTGAGCACTTGCAATTCATCCATGACAATGAGTTAAATCAAAGATCTGCAAATTTGGTTTTGATAATCCATGCTTAGCATTTAGTTCCAGTTCGGTCCTGGTGGTAGAATTTGTTAGTACATCCATTAGCAAATTACTTTAGTAACTTCAGCTATCTGTTTAAAATATCACATATCATGGATTGGATTCCTATCATATCAACAGACATGTGCATATACTAGTTACTTTCAAAAAGAATGATTTTACTGTCCTTACGGATCGAATACTAATACATTTAAACCTTATCAATTAAATACCTGAATCTGAAGATGATCTTTGTAGAAAGAGTGATTTTACAGTCCTTGAGTGATGCCAGGTGGTACCACATTTTATAATGTAAGAGGTACCAAAATTTATACCAGAAAATGTAGTACCTCAGGACCGTAAAAATTTCTCTTGTAGATATGTATTACTTGTTAATTATAGCCCTATGGAACGAGAAAAGCTCTGGCTGCAAGAGAAAGAAAGCAGAACAACTAGAATACATTGCCAAATCAAAGGATTGGAGTTCAGCATTTACACAACCACTCACTTGAACAATGAAATCCTTCATAAATGCAGGCCTTACAAAAAGGGAAGATTGGAATAACTCTGGTCTCGCACTGGTTTGTTCCCTTCTCCCGCTCCAAATCCAACAATGATGCTGCAAAGCGTGCTATAGACTTCATGTTTGGATGGTAAATTCTGTCACACATTATTTCATCATTGAAGTTGTTAAAACATGAAAGAAGTCTTCAACAATGAATTTCCCTTCTAGGTTTATGGATCCCCTCATTAGAGGCGACTACCCCCTAAGCATGAGAGGATTGGTTGGGAATCGCTTGCCACAGTTCACTAAAGAACAGTCTAAGTTGGTCAAGGGTGCATTTGACTTTATTGGACTTAACTACTACACTGCGAACTATGCTGATAACCTTCCTCCATCAAATGGCCTTAACAACAGCTATACCACCGATTCTCGAGCTAATCTTACCGGTGAGTCAATATGAGTTTATATTTCTATTTTAAATTCATAGTGTTTGCAACATTGAAATACAAAGATATGGCAAGCTTCTAGCATATAATATCCATTAGACTGTAGCATTTCTGATAAGCATTTTGGTCAGCTTATGTCATAGCCTCTGTTGCACAATACCTATCTGTTTCAGACGGGTCAATATATGCTAACCTATCCTGATTGTGCCAGGTGTACGAAATGGCATCCCCATAGGACCGCAGGTAACTCCATACTTTGTCCTCCACACAAAATAAATTAATAGTAAATAGTTAAGGTGAGATATTGAATTTTGTAAAATGGCATGTATGTAGGCTGCTTCACCTTGGCTTTACGTCTACCCTCAAGGCTTCCGTGACTTGTTACTTTATGTTAAGGAGAACTATGGCAATCCTACCGTCTACATCACTGAAAATGGTAAGTCTCCGATACTACGGTAACACATTCTAATTTTTAAATTAAGTCAGCAATGAACTCCTATGGCATAAATATTTTTCTTCTCCTAGCTTCTTGAAGAAATAAAATATATATTCTCTAAAAGTTAATGAATCTAACTGATTTTTTATTGCTGCATCTTAAGGCGTTGATGAATTCAACAATAAGACCTTACCACTCCAAGAAGCCTTGAAGGATGACGCTAGGATAGAATACTACCACAAGCACCTCCTTTCCCTGCTAAGTGCTATAAGGTCTGAACTCTGAACTATTGATCATAGACCCATTTCTGAGTAGGGTTCTTCAGATGCTAGTTGACAATGCATTACTCCATATGCCTTCACAGGGATGGAGCAAACGTGAAGGGATACTTTGCATGGTCGCTGCTTGATAACTTCGAGTGGTCGAACGGCTACACAGTTCGATTTGGGATAAACTTCGTAGATTACAATGACGGAAGGAAGAGATACCCCAAGAACTCTGCCCATTGGTTCAAGAAGTTCCTCCTGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014893

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA014893&oldid=63787"