Os12g0624200

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Revision as of 10:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0624200| Description = Sodium/calcium exchanger membrane region domain containing protein| Version = NM_001073848.1 GI:115489657 GeneID:4352...")
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Gene Name

Os12g0624200

Description

Sodium/calcium exchanger membrane region domain containing protein

Version

NM_001073848.1 GI:115489657 GeneID:4352835

Length

1764 bp

Definition

Oryza sativa Japonica Group Os12g0624200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:26895642..26897405

Sequence Coding Region

26895642..26897405

Expression

GEO Profiles:Os12g0624200

Genome Context

<gbrowseImage1> name=NC_008405:26895642..26897405 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:26895642..26897405 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccttcttgcgaacgctgcaccggcgaagaacgcgcaatgccgccgccgccgcgttcttggctctcgccgtcgtcgtcgtcgtcttcttcttgtccgtgttcgtcgccacgcggaatgaggctgacatcttcttcagtggcgtcgcggcggcgagctcgtcgtcgccggattcctcgtccggtgggtgcagggagctgcaggcgctcgacggcgatggcgcgaggtgccggtatctgcgggcgcacgcgccgtgcgcgccggtggggtacgtggactacctccggctgctgtactgcgggttcgggcgggcgccatggctgggctacgcggcgctcgcgctgtggctgctcgtgctcttctacctcctcggcgacacggcgtcggcctacttctgcgcctcgctggaggggctctccgccgtgctccgcctgccgccggcgatcgccggcgtcacgctgctgtcgctcgggaacggcgcgcccgacgtgctctctagcgtcgtggcgttcgccgcgggggcacgcggcggcgacggcggcggcggcggaggggaggatgccggggatgttggcctcagcggcgtgctcggtggcgcgctgttcgtgtccaccgtcgtcgccggcgtggtcgctatcgtcgccgggcgtcgcggtggtggcgagccggtgatcatcgagcggcgcgggttcgtgcgcgacgtgtgcttcctcctcgtggcgctctgctacctcctcgccgtgctgctcaccggcgccgtcaccgtctggtccgccgcgtcgttcctctccctctacgccggctacgtcctcctcgtctggacctcgcactgctgcgccaacgcctccgacgaactcgaagtggacgacaccaagcagcccacctccgacctcgccgcgccgctcctcgtcgtcgacgacgacgacgcgtcaccgcctccactccccgtctcctcctcctccaagcccacctccgcgccgagaacgttcgcgcgccgcctcgtcgacctcctccactcgccgctctacctcccgcgacgcctcaccatcccggacatcgcggcgcaccggtggtcgaagcccaccgcggtggccaccgcgctcctctccccgctcctcctcgccgccaccaccgcgcccaccaccacagcgaccaccctcctcgccgccacgctcgcgggcgccctcctcgccgccgccgcggcggccaccacggacgccgcgtccccgcccaagagccgctcggcccgcctcccgtggctcgccggcgggttcctgatgtcggtgctctggtcgtacgtgctcgcgcgggagctcgtcgcgctgctggtctccatcggcgtggcggccggcgtggaggccggcgtgctgggcgcgacggtgctggcgtgggggaactcgctgggcgacctggtggcggacgtggcgctggcgacgcggcgcggcgacggcggcgccggggcgcagacggcggtggcggggtgctacgcggcgccggcgttcaacacggtggtggggctggggctgtcgctgacggtggcggccggggcgcggcacccggaggcgtacgcggtggagggcggggcggcggtgtacgtggcggtggggttcctggcggcggcgctggtgtgggcggtggcggtgctgccggcgagggggatgaggctggacgcggtgctcggggtgggcctcctcgtcatctacttcgtcttcctctgcgtcagcctcgccattctcacgccattgccttcaccacattaa</cdnaseq>

Protein Sequence

<aaseq>MAAFLRTLHRRRTRNAAAAAFLALAVVVVVFFLSVFVATRNEAD IFFSGVAAASSSSPDSSSGGCRELQALDGDGARCRYLRAHAPCAPVGYVDYLRLLYCG FGRAPWLGYAALALWLLVLFYLLGDTASAYFCASLEGLSAVLRLPPAIAGVTLLSLGN GAPDVLSSVVAFAAGARGGDGGGGGGEDAGDVGLSGVLGGALFVSTVVAGVVAIVAGR RGGGEPVIIERRGFVRDVCFLLVALCYLLAVLLTGAVTVWSAASFLSLYAGYVLLVWT SHCCANASDELEVDDTKQPTSDLAAPLLVVDDDDASPPPLPVSSSSKPTSAPRTFARR LVDLLHSPLYLPRRLTIPDIAAHRWSKPTAVATALLSPLLLAATTAPTTTATTLLAAT LAGALLAAAAAATTDAASPPKSRSARLPWLAGGFLMSVLWSYVLARELVALLVSIGVA AGVEAGVLGATVLAWGNSLGDLVADVALATRRGDGGAGAQTAVAGCYAAPAFNTVVGL GLSLTVAAGARHPEAYAVEGGAAVYVAVGFLAAALVWAVAVLPARGMRLDAVLGVGLL VIYFVFLCVSLAILTPLPSPH</aaseq>

Gene Sequence

<dnaseqindica>1..1764#atggcggccttcttgcgaacgctgcaccggcgaagaacgcgcaatgccgccgccgccgcgttcttggctctcgccgtcgtcgtcgtcgtcttcttcttgtccgtgttcgtcgccacgcggaatgaggctgacatcttcttcagtggcgtcgcggcggcgagctcgtcgtcgccggattcctcgtccggtgggtgcagggagctgcaggcgctcgacggcgatggcgcgaggtgccggtatctgcgggcgcacgcgccgtgcgcgccggtggggtacgtggactacctccggctgctgtactgcgggttcgggcgggcgccatggctgggctacgcggcgctcgcgctgtggctgctcgtgctcttctacctcctcggcgacacggcgtcggcctacttctgcgcctcgctggaggggctctccgccgtgctccgcctgccgccggcgatcgccggcgtcacgctgctgtcgctcgggaacggcgcgcccgacgtgctctctagcgtcgtggcgttcgccgcgggggcacgcggcggcgacggcggcggcggcggaggggaggatgccggggatgttggcctcagcggcgtgctcggtggcgcgctgttcgtgtccaccgtcgtcgccggcgtggtcgctatcgtcgccgggcgtcgcggtggtggcgagccggtgatcatcgagcggcgcgggttcgtgcgcgacgtgtgcttcctcctcgtggcgctctgctacctcctcgccgtgctgctcaccggcgccgtcaccgtctggtccgccgcgtcgttcctctccctctacgccggctacgtcctcctcgtctggacctcgcactgctgcgccaacgcctccgacgaactcgaagtggacgacaccaagcagcccacctccgacctcgccgcgccgctcctcgtcgtcgacgacgacgacgcgtcaccgcctccactccccgtctcctcctcctccaagcccacctccgcgccgagaacgttcgcgcgccgcctcgtcgacctcctccactcgccgctctacctcccgcgacgcctcaccatcccggacatcgcggcgcaccggtggtcgaagcccaccgcggtggccaccgcgctcctctccccgctcctcctcgccgccaccaccgcgcccaccaccacagcgaccaccctcctcgccgccacgctcgcgggcgccctcctcgccgccgccgcggcggccaccacggacgccgcgtccccgcccaagagccgctcggcccgcctcccgtggctcgccggcgggttcctgatgtcggtgctctggtcgtacgtgctcgcgcgggagctcgtcgcgctgctggtctccatcggcgtggcggccggcgtggaggccggcgtgctgggcgcgacggtgctggcgtgggggaactcgctgggcgacctggtggcggacgtggcgctggcgacgcggcgcggcgacggcggcgccggggcgcagacggcggtggcggggtgctacgcggcgccggcgttcaacacggtggtggggctggggctgtcgctgacggtggcggccggggcgcggcacccggaggcgtacgcggtggagggcggggcggcggtgtacgtggcggtggggttcctggcggcggcgctggtgtgggcggtggcggtgctgccggcgagggggatgaggctggacgcggtgctcggggtgggcctcctcgtcatctacttcgtcttcctctgcgtcagcctcgccattctcacgccattgccttcaccacattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0624200, RefSeq:Os12g0624200

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os12g0624200&oldid=6379"