BGIOSGA014945

From RiceWiki
Revision as of 04:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014945| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014945, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA014945

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014945, complete gene.

LocusTag

OSJNBA0060P14.1

Ensembl Transcript ID

BGIOSGA014945-TA

Ensembl Protein ID

BGIOSGA014945-PA

Length

3387

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21414994..21418380

Sequence Coding Region

21418263..21418380,21417989..21418167,21416348..21416418,21416186..21416223,21415992..21416102
,21415802..21415901,21415204..21415339,21414994..21415107

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21414994..21418380 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21414994..21418380 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTGCTCCCACCTGGCCGCCGCCGCCGCCGCGGCCTCCCCGGCGGCCGCGCGTTCACCGGCGGCCTCCAGCGCCGCAACCGCGAGCGCCTTCGCGCGCCTCTCGGCGATGCCCCGGGTCGCGAGCGGCGGGTTGGCCGTTAGGGGCCAGAGGGGTGTAGCCGCTGTTGTCGCCGCCGCCGCCGGGGCCGCCGCGGCGACGCCCGTGGCCGACTTCGAGGACCGCCGGGCCACCGAGAAGCAGCCCATCATTGTCATCGATAACTACGACAGCTTTACCTACAACCTCTGCCAGTATATGGGGGAGCTTGGATTGAACTTTGAGGTATATCGCAATGATGAACTTACCATAGAGGATGTAAAGAGGAAGAACCCAAGAGGAATACTTATTTCTCCAGGGCCTGGTGAGCCACAAGATTCAGGTATATCATTGCAGACTGTTCTGGAACTTGGACCTACCATCCCAATTTTTGGTGTCTGCATGGGTCTGCAGTGTATCGGGGAAGCTTTTGGAGGAAAGATTATCCGTGCTCCTTCTGGTGTCATGCATGGAAAAAGCTCTCCAGTTCGCTACGATGAGGAGCTAGGGAAGGCCTTGTTCAATGGCTTGCCAAACCCATTTACCGCTGCAAGATACCATAGCTTGGTGATCGAGCAGGAGACCTTCCCCCATGACGCTCTGGAAGCCACCGCGTGGACTGAAGATGGCCTTATCATGGCTGCTCGCCACAAGAAGTACAGGCACATCCAGGGAGTCCAATTCCACCCAGAGAGCATCATCACCCCAGAAGGCAAGAGGATCATTCTCAACTTCGTGAGGTTCATCGAGGAGCTGGAGAAGCAGCGTGCCGGAGAGAAGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MACSHLAAAAAAASPAAARSPAASSAATASAFARLSAMPRVASGGLAVRGQRGVAAVVAAAAGAAAATPVADFEDRRATEKQPIIVIDNYDSFTYNLCQYMGELGLNFEVYRNDELTIEDVKRKNPRGILISPGPGEPQDSGISLQTVLELGPTIPIFGVCMGLQCIGEAFGGKIIRAPSGVMHGKSSPVRYDEELGKALFNGLPNPFTAARYHSLVIEQETFPHDALEATAWTEDGLIMAARHKKYRHIQGVQFHPESIITPEGKRIILNFVRFIEELEKQRAGEKN</aaseq>

Gene Sequence

<dnaseqindica>1..118#214..392#1963..2033#2158..2195#2279..2389#2480..2579#3042..3177#3274..3387#ATGGCGTGCTCCCACCTGGCCGCCGCCGCCGCCGCGGCCTCCCCGGCGGCCGCGCGTTCACCGGCGGCCTCCAGCGCCGCAACCGCGAGCGCCTTCGCGCGCCTCTCGGCGATGCCCCGTACGAATCGCGCGTTCTTCGTTTCGTTTCGTTCGCGTGCTTTGATTTGGCGCATCTCGTGGTTTTGATTGGACATTTTCGTTCTGCCTCCGCAGGGGTCGCGAGCGGCGGGTTGGCCGTTAGGGGCCAGAGGGGTGTAGCCGCTGTTGTCGCCGCCGCCGCCGGGGCCGCCGCGGCGACGCCCGTGGCCGACTTCGAGGACCGCCGGGCCACCGAGAAGCAGCCCATCATTGTCATCGATAACTACGACAGCTTTACCTACAACCTCTGCCAGGTATATATATATATGGTTTCACGTGTTGTTCGTGGCTGGTACCCTTTATTACCTGTTAAATTACCTGATGATGTGTGAATATGTACTGTTTGGTTTTTGTGATTTTGATCCATTCCTGGATCAGATAAGTTTACCATTTTGAGAAGTGTTGCCCTGACATAAATTTTACTTACTTGCAACCTGTCATGCCTTTTTTTTAAAGAATTATGGTTTATATTCATTGTTAGAACAATTTATTCTGATCTTTGATTATTTTTGGTGTTTCTCCTTGTATAGTTGCAGTTGAAGTTGCATGTTTGATGGTTTTATATATTTCCAATAACAGTTGGTCATAGTCTAAGATTAGCTTATCCGATTGTATTGGTCCTATGAATCTATGATGACATGATGAGTATTTGTTCACAAGAATGTTTGGAGTCCTGACTATATTCATTATCTGTGCTATTGTCAGGGCATATTAGCCTCTCTTTTTTGTACATTTTGGAAGATGGATGAGTAGGATTAGTTCAGCCCATGTCCCACCCCTCCTGTTCCTATATGCAAACAACGAATCGTACTTTTTTGCAAGTAAATAATGTCAGCAGGAATCTGAGTAAAGTGCAGAGAGGGATTTCAGATAAATCTATCTATATTGCTTATTGAAAAGAACAATACCATTTGTATGCATTGTTCCAATTCTATAACGGCTTTAACATATATTGGTTGGTTGTTTCCAAACTAGAATAACGAATAATAGATGTGTTCGGTAGCTAGCTGTCGGAATAACGAATGCTAGATTTGTTCGGTAGCTAGCTGTCGCCTGTCGGAATTTATGACCGTTTTAATAGGCTGTCTTTAAGTGCTTGCAACCTTTCCTGGTATTTGCTATTTAGAATGGCTTTATAAAGCAACTATTTTAATCCAAATGTGCCTGCCTCGCCATTTTACATATATGTACTAATAAGGTTGGACCTAAAAAATTGGGCCAGGGAATTGTTATTCATTAATATTGAAAGAAGGTGGGTAAGTATACTTGGATATAATGTTGAGACTAACAATAGATTTGAATGGTTATGAGGTAAAAAAGAGACACTTGGAGATAATGCTTTTGCTTATCCTGACCCCTGAGCAGTCATCTATATTGTTACATTAATTGACAAACACAAGAGGTGTATTCAGAGTGTGCTGTGCATGTTCTGCGCCACTGGTTAATGGCTTAATGCCAGGCAATTTTATTTAGAGGCATGTTTTTAAAATGGTTCAATGCCAATTGGATCTTGTATAAATTTCCTTGTATTTTGTTCAGCACGTCTCAAGCTTTATGGCATGGTTTGTAACATCATTTCATTAATGCTAACTAGTTACCAAACTAATTATATTGTGCATTATGTACCACCAAATTATTCTGTGGTGCTCTTGTTATACTTTTTATGGAGATGAGGCCAAGTATTTTGCGTTTGAACTTTTAGTAGTAGTTGGATCAGTTTCTATGACATTCACAAATGTTGTTCCACTATTGAAATATGTCATGCAATGAACCTGTCATATGAGAAAAGGATGCCTTGCTGACGTAGAGTTTTTTGTACTGAAGTATATGGGGGAGCTTGGATTGAACTTTGAGGTATATCGCAATGATGAACTTACCATAGAGGATGTAAAGAGGTATTTTCTTGGAGCACATATTCATTTGTGATTTATTAGTTGCTTCATGCACCAAAGGAAAAGGATTATGCATGTAATAACTTCTCAGTGTTCTGATGGTAATCTCATATTTAATCTTCTGTAGGAAGAACCCAAGAGGAATACTTATTTCTCCAGGGCCTGGTAAGTTTGTCTTGTGAATATCATGACAGTAAATACAGTATATAGGCCTGAGTGTAACAATTACTTTCATGTTTCTTCTTCAGGTGAGCCACAAGATTCAGGTATATCATTGCAGACTGTTCTGGAACTTGGACCTACCATCCCAATTTTTGGTGTCTGCATGGGTCTGCAGTGTATCGGGGAAGCTTTTGGAGGTTAGACTTACTTTCATATTGGGTTGCAATAATGGTTTTCCATGACCTCTGCTATCAACTTACTGAAAAGGTGGTTCATGTAAAATTCAGGAAAGATTATCCGTGCTCCTTCTGGTGTCATGCATGGAAAAAGCTCTCCAGTTCGCTACGATGAGGAGCTAGGGAAGGCCTTGTTCAATGGCTTGCCAAAGTATTGTTTCTACACTATTTACTCATTTTTTTTCATTTTCTTCCAAATTCTCATGGTGTTTTAGTCTGCATTAAGTTCCATCTTGCTGCATAGCATCAATTGATGGTCCTGTGCCTGCAGAAAGCTATTGCATACTACATGTTGTGATTAAATCTGTTGTATGGTTGGAAATCAGAAGGCTATTCAGCTCATTTTTGCTAAATTATAGCTTTATGTTTACCTGGCGAATTCTGCAGCATGTGGCATCCAATTGCTAGCTAACTCATGCAACTTTCCATGTTCACGAAGTTGTACTGAAGAGTTGTAGAAAAGAATTGCTGTGTACATATCATAGTGTATTTCAGTGTGCTAGTGTTCATTACCTTGGAGCATGGAAAAAAAATATGCTCGTTTCCATTTGAGATCATACAACTTTTATCAAGTAGTTTCTCAATCTGACATGATCCTCACTTCCATGAACAGCCCATTTACCGCTGCAAGATACCATAGCTTGGTGATCGAGCAGGAGACCTTCCCCCATGACGCTCTGGAAGCCACCGCGTGGACTGAAGATGGCCTTATCATGGCTGCTCGCCACAAGAAGTACAGGCACATCCAGGTATATATCTAAATCAAATGCTTGGCGCCACAGCTTTCGATGTACACCCCCCCCCCCCCCCCCGAGTTGTTATTGATGTCAATGGCATCATTTCAGGGAGTCCAATTCCACCCAGAGAGCATCATCACCCCAGAAGGCAAGAGGATCATTCTCAACTTCGTGAGGTTCATCGAGGAGCTGGAGAAGCAGCGTGCCGGAGAGAAGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014945