BGIOSGA014949

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Revision as of 04:06, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014949| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA014949, complete gene.| tag = OsI_161...")
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Gene Name

BGIOSGA014949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA014949, complete gene.

LocusTag

OsI_16198

Ensembl Transcript ID

BGIOSGA014949-TA

Ensembl Protein ID

BGIOSGA014949-PA

Length

6258

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21381967..21388224

Sequence Coding Region

21387787..21388224,21387223..21387309,21386894..21386943,21386051..21386153,21385860..21385946
,21381967..21382632

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21381967..21388224 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21381967..21388224 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAACGCTGACGGTGCGCGAGGCCATTTACTACTCGGCGCAAATCCAGCTGCCGGACACCATGTCGACGGCGGAGAAGCTGGCGCGCGGTGACGACACGGTGAGGGAGATGGGGCTGACTGGCGCGCTGGACATCCGGATCGGCGGGCGGTCGAGCAAGGGAATCAGCGGCGGGCAGCAGAAACGGCTGAGCATCTGTCTCGACATCCTGACCTGTCCCCGCCTTCTCTTCCTGGATGAGCCCACCAGCGGCCTTGACAGTGCTGCCTCCTTCCATGTCATGAGCCGAATCGCCAGCCTCGCTGCCAGGGAGGGCATGACCATCGTCGCCGTCGTGCACCAGCCGTGCAGCGAGGTCTTCGAGCTCTTCCATGGTCTCTGCCTGCTCGCCTCTGGGAGTACCATCTTCTTTGGCCCAGCTTCAACTGCTGCCGAGTTCTTTGCTTCGAATGGCTACCCTTGCCCGCCAATGAGGAACCCATCGGATCATTTCTTGAGGACTGTGAACAAAGATTTTGATAAGAGATTTGACTCAGACATTGGGGTGCTACTCAGGTCACTGCAACCACTAGGAGATATTGGATATTATTGGTTGCGGTTGGCCATTTACGTTTGCATAACTGTTTGCCTTGGGACCATATTTTACCATGTGGGCTATGGACCCGATTCAATTCAAGCTAGATCACACATGCTAATGTTTATTGCCACACTGCTAACCTTTATGGCAATTGGAGGGTTCCCCTCCTTCGTGGAGGACATGAAGATCTTCAGGAGGGAAAGACTAAATGGACACTATGGTGTGGCCGCATTTGTCATCTCCAATACATTGTCATCCATACCATACCTTCTCCTTAATGCTGTAGTACCTGGTGCAATTGCATACTATCTTACTGGCTTACAAGGGAAAATTGAACATTTTGTCTATTTTGCGCTAGCACTTTGTGCATGCACTATGCTAGTCGAAGCCCTAATGATGATCGTAGCAACCATTGTACCAGATTTCCTAATGGGGATAATCACAGGTGCTGGTATACAAGGTATTATGATGCTTACTAGTGGATTCTTCCAAATACCTAATAACCTTCCAAAGATAGTATGGAAGTACCCAATGTACTACATTTCCTTTCACAAGTATGCACTGCAGGGGTTTTACAAGAATGAGTTCTCAGGGTTAGTCTTCCAAAGTAACCTAGAAGGACAGGAAACAGTGAGTGGTGAAAAAGTTATTGTTGAGTTATTTCAAGTGGAAACAGGTCATTCAAGATGGGTGGATCTTGCGGTACTTTGTGGCATGATTGTCATCTATAGGCTATTGTTTGTAGTGATTATCAAGGTTATTGATGTGGTCAAGCCCATGCTTTTGGGGTTGACATTTAGGTGCAACACTAAATGCATTTGTGGCATAGAGAACCTTTGCAGTACTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MATLTVREAIYYSAQIQLPDTMSTAEKLARGDDTVREMGLTGALDIRIGGRSSKGISGGQQKRLSICLDILTCPRLLFLDEPTSGLDSAASFHVMSRIASLAAREGMTIVAVVHQPCSEVFELFHGLCLLASGSTIFFGPASTAAEFFASNGYPCPPMRNPSDHFLRTVNKDFDKRFDSDIGVLLRSLQPLGDIGYYWLRLAIYVCITVCLGTIFYHVGYGPDSIQARSHMLMFIATLLTFMAIGGFPSFVEDMKIFRRERLNGHYGVAAFVISNTLSSIPYLLLNAVVPGAIAYYLTGLQGKIEHFVYFALALCACTMLVEALMMIVATIVPDFLMGIITGAGIQGIMMLTSGFFQIPNNLPKIVWKYPMYYISFHKYALQGFYKNEFSGLVFQSNLEGQETVSGEKVIVELFQVETGHSRWVDLAVLCGMIVIYRLLFVVIIKVIDVVKPMLLGLTFRCNTKCICGIENLCSTS</aaseq>

Gene Sequence

<dnaseqindica>1..438#916..1002#1282..1331#2072..2174#2279..2365#5593..6258#ATGGCAACGCTGACGGTGCGCGAGGCCATTTACTACTCGGCGCAAATCCAGCTGCCGGACACCATGTCGACGGCGGAGAAGCTGGCGCGCGGTGACGACACGGTGAGGGAGATGGGGCTGACTGGCGCGCTGGACATCCGGATCGGCGGGCGGTCGAGCAAGGGAATCAGCGGCGGGCAGCAGAAACGGCTGAGCATCTGTCTCGACATCCTGACCTGTCCCCGCCTTCTCTTCCTGGATGAGCCCACCAGCGGCCTTGACAGTGCTGCCTCCTTCCATGTCATGAGCCGAATCGCCAGCCTCGCTGCCAGGGAGGGCATGACCATCGTCGCCGTCGTGCACCAGCCGTGCAGCGAGGTCTTCGAGCTCTTCCATGGTCTCTGCCTGCTCGCCTCTGGGAGTACCATCTTCTTTGGCCCAGCTTCAACTGCTGCCGAGGTTAGTCGATCTAACTGTGATATATATAGTGGGAATTGAATTCTAATCCCTTAGGAGGTATCCTCTCGTGTACCGTTTTCTTCAATGTTTAATGCGTGATGGTTGTGAAAAATTAAATTTGATAATGTAGTGTATATATAAGCTAGCGACCACTCCACCAAAAATCAATTTCAAATTTGATCTACATATGGAGAAAAAAAGGACAAATATGAATGTGAACAGCATTGGAATGCTAATATGATGGACTTATCTTTTTAATTTTTCATTGTGTAAGTTGATTTTTGGCTTGACTTTTTTGGAGAGTATATGTATATTGTATGAATGTTGTTATTTTTTTTGAAAATCTTTAGTAACTATTTGGAGGATGTTTGAACAAATGAGGATACATTAGTTCCTGGGATTAAAGAGTTTCCCATATATACTGTCTATGTATGTACGTGTTTACTGTTTTTACCTTCTAATTGGTTTAATTTGCAGTTCTTTGCTTCGAATGGCTACCCTTGCCCGCCAATGAGGAACCCATCGGATCATTTCTTGAGGACTGTGAACAAAGATTTTGATAAGGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTGTGGTCTGTGACTCCGATTCATTTTTGATAAGGTTAGATATATAGGGTGGTAGATGACTACAATTCATTTTTATTTAGAGAAGGGTATTTTTTACCCGGCCTCTATATCTAACCGGATATATGCGGCCTTTTTAAATTAGGAACTTAGCCTATCAAATAGGAAATTTAGCCCTCAAATAATCTAATTTGAAATTCACTCCTATAGAGATTTGACTCAGACATTGGGGTGCTACTCAGGTCACTGCAACCACTAGGGTACATGCATTTCACAATTGAAAAGGCTATACGTATTAACTTTTTCTTACGAGATGATTGTTAGTAAAAGTTTAGTAAGAAAAATTTAGTACGTGTAGCATTGCTCTTTCACAATTCATACGCAGTATAACTAGTTAATGGAATATCATAATTTGTTTTAGATAATGAAAAATTGTTTAAACCTCAGGCCTCTGCACATACTATGTATACAACCCAACAGTAAAAGATAAGTTAAAAAGATAGGCTACGAGTAACACCACCGTAGGATTTTCTCTAATCTGGAAGTAAAGCATAATTGGAAATTGGACGACAGCATTTATAACTGAATGGTTTTCAGCACGACAAAGTGAACATATCTATGCTATATATAGATGCCATAATTTCTTCGTTTCGGAATTGTTGTCTTTCAATTTGCTGACACACATACAGGAGAGTGAAGAAGGACTCCCGTGCATGCCAGAAGAGGAAGCAATAGACATTTTGGTGAACTCATACAAATCCTCCAATACATCAGAAGTTGCGAACCAGGAAATGCGTTACGTAAACGAGGTGGTTTCTGTTCTAATTTTGCGTATATAATTACATGTAAACATTAGCATAATTATATTTTCATGGTATATATCACAAGTTAGTTTAACATATTCTTTTCATTCAGGATCGGGCGATGATTGGAAGAAACCGACCTGGTTTGTTACTAAGACACTTGTGCTTACTAGACGTTCATTTGTCAATATGTATAGAGATATTGGATATTATTGGTTGCGGTTGGCCATTTACGTTTGCATAACTGTTTGCCTTGGGACCATATTTTACCATGTGGGCTATGGACCCGATTCAATTCAAGTAAGTGAAGATAAAACATTGGTTGTTCTCTCGCAAATTGCTGATCGAGTATGCATCAACAATTAAAAATTAATATATTAATTAATTAATTTTGATTCTTTCAGGCTAGATCACACATGCTAATGTTTATTGCCACACTGCTAACCTTTATGGCAATTGGAGGGTTCCCCTCCTTCGTGGAGGACATGAAGGTATTATGAATTTAACTTATATGTATATTTATGAACAGAAAGATCAAACGTGTTTTCTCTATATGATTTTTTAAATTCGACCGTATATACCAACATAAATAAATTTGTAGGTGAGCATAGAAGCGATGTCTGGAATCGATTATGCATTTCACCAGCACTTTGTGTATACAACAGTGCAAAATCATAATACTTTATAATGATTCAACAAAGTATCAACGCAACCGAGGCTCCCATCGTTTCCCCCATTCATCATCAGCCGCTGCCAAAATTTGAATTTTGAACCATAAATTTGAAGTTGATTTTGAAGTTTTTTTATTAAAGTTTATTTAACTGAAGCACAAAGTTTCATCAAACTTTCTTACATAGAGGAAAAGGAAGAACATTATTTAACTAAGAGAGAAAGAACAGAAAAATAAATTCATTTCCAATTTAGGTTCCGCATAGAAAAACCTAAAAAAACTCTTAGTATCCTGAAAAAATTCAGGGAGATAAAATAATTCTAACTCATTTCTATTTTTTACTGGATTGAGTATACTGAATTACCATTAAGCTTTAACTACATCAACGTGTCCATCCATACATGCTACGTATTTTACAAAATTAATATCGGCTTACAATATTGTAAATCAGATTTTAGAACCAGTAGTCCCTCTGTTTCAGGTTATAAGATGTTTTGACTTTGACAACTATCAAACTGCTTCAAGTTTGACCAAATTTATAGAAAAAAATAGTAATATATTTTTTACGCAAGATAAATTTATTGTAAAAAAAATTTAATTATAATTTAATGAAACCAATTTGGTAATATAAATATTACTATATTTGTCTATAAACGTAGTCAGACTTGAAGCAGTTTGACTTTGACAAAAGTCAAAATATCTTATAACCTAAAACGGAGGGAGTAACAAATATTATTTGATTAATATTTTCTGATTTCAATATTATTTGATCGTGAAAAAACAAACTGAAATTATTAATTTTTATTTATTCTGAAATTTGGATTGCTAAAATGAATACTTCAACAGAGAACTCCAAGTGAGTACAACTAGGTATTTACTAACTCATTACTAACTCGAGTTTTAATAAATCCAAATATTATTTGTTGGACGATATCTGGCCATAGGTTTGATAGATGAACTCACAAGTTCAATATTGGAATTTCTACCTTTTCTATCTTTTATTGGGATTTATGTCGGTTCCTCTTGGTGAAGCCTCTCTAATTAGTATATATAGATTTTGAAGCAATAAATTATTTATTAATAAATACAGAGTGATGATTTTCATAATTTTATTAAAATAGTTTAAATACTTGCCATTTGCACAAGAGGTCACATTTTATGACATATGAAATAATCAAATTAGCAACATTCTTTTTTTTAGATAATGGAATTAAATCCCGGACTTTACTTAAAGAGGTACAGCCAATTATTACACCAGTTCAACCAAACTCGAACTAAATAAAACAAAGACATAGAAACACACTCCTCACAAAACAGGAGCACACACAAGTACTTGAAAACACACTCCTTTCAAAACTGGGGCACAAACAAAAACCAACCTAAAAGAACACATGATTATTGAATTCTATTTGTGAATCTTCATCCAAAGTTGGCGAAAAGATGCATAACCATTGAATCAATATTACGACATGCAGTTTTTACTAGCTTGATATCATCATCAAACATTAGTAGTTGAGCCCATGACAAATAGCAGATGCTCCAACAAGAATAGCGGATGCTCCAACAACAATAGTTAACCATTGAATCAATATTACGACATGCCAGTATGTTGCCCTGAAAAGAACCTACACATAAGGTGACTTGCCAAAAACATATCATTCCTATGCAGCCATATGGCCGAACAAATAGCGGATGCTCCAACGAGAATAAGTTTACTACTTTTTTTATCCACTCCCACAAGCCAATTCTAAAAAATATGAGATATACTATGTGGAGCATATAAACCACAAGAAAACTGTAGAGCATATAAATTTTGCATAATGACACTCCAAAAATAAATGTTGAATAGTCTCATTTTTCATGCAAAAGCAACATTTCATACGACCATGCTAGTTCCTCCTAGCCAAATTGTCCTATGTCAAGACAACCCCTTTAAGTAGGTATCACATAAAAATCTTAATCTTAAGAGGCATCTTAAGTTTTCATAGAAACTTATTCCTCTCCAACATAACCATGATTAATTAAAACTAAATACATAGAACGAATGGAGAATTGACCATTTTGATGAAAATTCCATCTAAAAATATCATTATCCCCAGTCAAATGAATATGAACAATTGAAGCACATAAATTATGCCAATTAGTCATATCCTGACCTACTAAAGCTCTCCTAAAAGAAACATTCAGAGAAACATAAGACATAATATTTGCAATCGAAGAGTTTCTCCTTCGAACTATAGCATATTGTGATGGGTACTTATCTTTAAAAGAAGAATTTCCTACCCAATTATCCTCCCAAAATCTCACTTGCTGACCATTATGCACAATCCAAGAATCCATATTTAGAAATGTGCTCTTAACTTTCATAAAGCCCGACCAGAAATGGGAATCCCCTTGTTTCCACTCAACTTGACTTAAAAGCCTGATTATTCAAATATTTTCTTTTCCATAGATCTTGCCAAACACCCTGTTCATTAATTAGCTTAAACAACAACTTGCTAAAAAGACATTAATTTTGATTTTCTAAATTATGAACTCCAAGACCACCCTGATCTTTAGGATGACATATAATATCTTATCTTGTAAGTCTATATTTCTTCTTATGCTCATCACCTTGCCAAAAGAAACGTGGCCTATAATAATCAATTTTTTGAAGAACTCCTTTTGAAATCTCAAAAAAATATATGATAAACATGGCTAAACTAGAAAGCACAGAATTAATTAACACCAATCTCCCCCCCTACAGACAACCACTAAGTTTCTTGTCAATTCTTTCCTCAATTGTTTTCTAGCCCTTGTTGTTTAGTTTCCTAAAATGCATAGAAATACCAAGATATCTTACAGGAAAGTACCCAAGCTTACAACCAAAAATATTAGAATAAAGCTCCTAACATTCTGCAGCCTGACCAAAACTAAATATTTCATTTTAAGACAACATTCATTTATCAATCTGGTTAGAAAAAACATTCATTTATCAAATGAATTTGCGTTTGTGCATCAAATTTTGCCTAATGAAATTTAAACTCTTGTATGTCTCATGTTGCTCAGATCTTCAGGAGGGAAAGACTAAATGGACACTATGGTGTGGCCGCATTTGTCATCTCCAATACATTGTCATCCATACCATACCTTCTCCTTAATGCTGTAGTACCTGGTGCAATTGCATACTATCTTACTGGCTTACAAGGGAAAATTGAACATTTTGTCTATTTTGCGCTAGCACTTTGTGCATGCACTATGCTAGTCGAAGCCCTAATGATGATCGTAGCAACCATTGTACCAGATTTCCTAATGGGGATAATCACAGGTGCTGGTATACAAGGTATTATGATGCTTACTAGTGGATTCTTCCAAATACCTAATAACCTTCCAAAGATAGTATGGAAGTACCCAATGTACTACATTTCCTTTCACAAGTATGCACTGCAGGGGTTTTACAAGAATGAGTTCTCAGGGTTAGTCTTCCAAAGTAACCTAGAAGGACAGGAAACAGTGAGTGGTGAAAAAGTTATTGTTGAGTTATTTCAAGTGGAAACAGGTCATTCAAGATGGGTGGATCTTGCGGTACTTTGTGGCATGATTGTCATCTATAGGCTATTGTTTGTAGTGATTATCAAGGTTATTGATGTGGTCAAGCCCATGCTTTTGGGGTTGACATTTAGGTGCAACACTAAATGCATTTGTGGCATAGAGAACCTTTGCAGTACTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014949