BGIOSGA014980

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Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA014980| Description = Japonica Group Os04g0455800 (Os04g0455800) mRNA,| Definition = Oryza sativa Indica Group BGIOSGA014980, complete gene....")
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Gene Name

BGIOSGA014980

Description

Japonica Group Os04g0455800 (Os04g0455800) mRNA,

Definition

Oryza sativa Indica Group BGIOSGA014980, complete gene.

LocusTag

NM_001059499.1

Ensembl Transcript ID

BGIOSGA014980-TA

Ensembl Protein ID

BGIOSGA014980-PA

Length

2812

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20925842..20928653

Sequence Coding Region

20928211..20928653,20927254..20927465,20926760..20927139,20925842..20925889

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20925842..20928653 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20925842..20928653 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGCTGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCTTCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTTGACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGATGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACTAA</cdnaseq>

Protein Sequence

<aaseq>MHGRRHLAASLARALTYAPSRSISSTPSLLQTLDPSTPSPAAAPPTAGRLAELRQRLQADAPSLGDFTYSVEVGTRKKPLPKPKWMKETIPGGAKYAGIKAKLRELKLHTVCEEARCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPSNVAQAIASWGLEYIVITSVDRDDLPDQGSGHFAETVQKLKVLKPEMLIEALVPDFRGDPACVEKVATSGLHVFAHNIETVEELQRNVRDHRANFKQSIDVLKLAKEYAPAGTLTKTSIMLGCGETPDQVISTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYVTPEAFERYRSLGVDMGFRYVASGPMVRSSY</aaseq>

Gene Sequence

<dnaseqindica>1..443#1189..1400#1515..1894#2765..2812#ATGCACGGCCGCCGCCACCTCGCCGCCTCCCTGGCCCGCGCCCTGACCTACGCCCCCTCCCGCTCCATCTCCTCCACCCCGTCGCTCCTCCAAACCCTCGACCCGTCCACGCCCTCCCCCGCGGCCGCCCCGCCCACCGCGGGGCGGCTCGCGGAGCTCCGGCAGCGGCTGCAGGCGGACGCGCCGTCGCTGGGGGACTTCACGTACTCGGTGGAGGTGGGGACGCGGAAGAAGCCGCTGCCCAAGCCCAAGTGGATGAAGGAGACGATACCAGGCGGCGCCAAGTACGCGGGGATCAAGGCCAAGCTGCGGGAGCTGAAGCTGCACACCGTCTGCGAGGAGGCGCGCTGCCCCAACCTCGGCGAGTGCTGGTCCGGCGGCGAGACCGGCACCGCCACCGCCACCATCATGATCCTCGGGGACACCTGCACGCGCGGCTGCAGGTAAGAGATTAATCCTCTTCTTGTTGCTGCTTGCATTAGATGTAGCTGGGCTGCTGCTTAGATCCTTTTCGGATTGTACATGGAGACCTTACTATCATGTCTCCGTAATATTAGAGACTTTATCTGTAGAGATAGAATGAAGCTTTCTCATATGCTATCCATTTCGATGAAATTTCACAGATTGATGTCCTTGAAGGTATAACTTGAGCCATGTTAGTGCAAATGATGTGGTTATTGTATCTTCTAGTTTATTTTAGTTGCTTGTGCTAGATTATGTGGATGCTTGAGCTCTGCTTGTGATGTAAAATTAGGTCCTATCATTTGTGCATTAGGGATGTTAGCAAAAATTGTAGAAATAGGCAAAGAGGTAATTAACTTAGTGTAGAGAAATCATGAGGGATCTCCAGTTCTTCTGTATTTTCGAATAGGTTGTTTTCTTAAACATAAACCAACCTTGTTGGAAATATTTTGAGCATAAATTTCAAAAAATATCAGAATAGGTTGTCCTGTATGATGACAATTTCAGGGTACTGTCTCTTTATCTAGTACTATCCATGTGACCTTGTATGGAAAGAAGTGTTCTGTGTTATTATTGTTGTGATTTGTCCATGAATTCCAGTTGCTAGTTTAAGATTTGCTGATGTTGCGCTCTACCTTCTCGTGAATTGGCACTAACCTTTTAGACAAGGTATTGCAAGTCTTCTGTTTTGATCGTTTAGTGAGTTGGCAAGTCATTGATTTGCAGGTTTTGTAATGTCAAGACCTCGCGAACTCCTCCGCCACCAGATCCTGATGAACCTTCTAATGTTGCTCAAGCTATTGCCTCGTGGGGCCTGGAGTATATTGTCATCACAAGTGTTGACCGCGATGATTTACCTGATCAAGGGAGTGGTCACTTTGCTGAAACAGTTCAAAAGCTAAAGGTGTTGAAGCCAGAAATGCTTATTGAAGCACTTGGTAAGTGACATATTTCTGGTATATTGCTTTGTTATTCGGTCAGTATATTATCAGTCCTCTGTCTGCTAATGTTGTGCTTCCCTATATTGTACCCTTATGCAAGTTATTTTGCAGTTCCTGATTTCCGTGGAGACCCAGCATGTGTAGAGAAGGTTGCTACTTCTGGGTTGCATGTTTTCGCCCACAACATTGAAACAGTTGAAGAGCTGCAAAGAAATGTGAGAGATCATCGTGCGAACTTCAAGCAATCAATAGATGTCCTGAAATTGGCAAAAGAGTATGCTCCAGCTGGTACCCTCACAAAGACATCAATCATGCTGGGTTGTGGAGAAACGCCTGATCAGGTTATCAGCACGATGGAAAAGGTTAGGGCTGCTGGTGTTGATGTAATGACATTTGGTCAGTACATGAGACCATCTAAACGTCATATGCCTGTTTCCGAGTATGTTACTCCCGAAGCCTTTGAGAGGTATCGATCCCTTGGTGTTGACATGGTACGTCCGTCTTCCTGGAAGTTTTTTGCATCATTCAAAGTAAAATCAAGTATTGGCTTTCATTAGTAGGATACATAGTGTACATGGCAAAGCTTAATTTACTATTAACATCAGATTTTATCACAATAAAGAAGCTTTCCTTGGCATCCTCATGTAGACTATTAGCTAGTCAATCTTTATTAGTTTTCAATGAGGGATATGATAAACAGAACAATACAACCAATCTAAATAGCTGTTTATTTGCTCTATCATTTGGTGGACCAAACTTGATTTTTTGAGAACGTAGGCACTTGCTTTGTCATACAATCTGCCTCCATGCTCAGTTATTCGTCTAACAATCTTAACTCCAGGGATTTGTAAATCTCGACTTTAAATTTGGGCTCCTTTGGAAGAAAGGATTTTTGAAGGAATTCTGGAGAAATTCAATCCTATGGAAAATTTTCATACGTGGTCGTTTGGATCAAAGGAATAGATAGCCAAAAATCCTATAAAATTTTAGATTGGCTCAAAACATAGGAATTTTTCCATGAGGTCCAACCTCTTGGGGAAAAAAATCTTCTCTCTCTCTCTCTCTCTTCTTATTCTTACATTTTTCCTGGGCTCCATTTAAACGGTCATTCCTATAGTATTCCTGCAATTTTTCAGTCCATAGGATTTGAGGTGCTTGAGCACTCCAATTTCCTGTATTTTTCCTATTCCTGTGTTTTAAGAATCTTGCTTTCCAAAGGAGCCTTGCATGCATTTCTTAATACTCCCATGTTGGCTCTCAGAATCTTTCCTACAGTTCAAGGTTTTTAAACAATACTACTGTACTTTGTATAACAGTAATTAGCTTGTTTGCTGATGAAATGCCATGGTCATGAATAACAGGGCTTCCGTTATGTGGCTTCGGGCCCAATGGTTCGATCTTCCTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA014980