Os12g0626400
| Gene Name |
Os12g0626400 |
|---|---|
| Description |
Similar to Phytoene synthase 1, chloroplast precursor (EC 2.5.1.-) (Fruit ripening specific protein pTOM5) |
| Version |
NM_001073857.1 GI:115489675 GeneID:4352846 |
| Length |
3093 bp |
| Definition |
Oryza sativa Japonica Group Os12g0626400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:27006943..27010035 |
| Sequence Coding Region |
27007185..27007334,27007422..27007614,27007894..27008129,27008259..27008431,27008547..27008597 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:27006943..27010035 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:27006943..27010035 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>aaccccaaccattcgacccgcgcagcgagccccaaccccacatcgccgcgcgcccccgatggcgtcctcctcgtcggcggcggcgctctggacggcggcgccccacccccacggcagctgcatcaggatccacgccatcttccaccagcgtcaccagcggagggggaggaggccggtcgtcgtcgcctcgtcggtgaggccgctgcaggccgcgagcctggcggtggccacggcgccggtggccgtggcgtcgaggaggacggcggcggaggaggccgtctacgaggtactcagcttatgactcctgaaaggcgcaaagctgtctgggcaatctatgtatggtgcagaagaactgatgaactggtagatggccctaactcgtcttacattacaccaaaggcacttgatcgatgggagaagagattagaagatctcttcgaaggcaggccatatgatatgtatgatgcagccctctcggacacagtgtcaaagtttccagtagatatccagccattcaaagacatgattgaaggaatgaggcttgacctgtggaaatcaaggtataggagctttgatgagctctacctctactgctactacgttgctggcacggttggtctcatgacagtaccggtgatggggattgcccccgactcgaaggcctcaaccgagagcgtgtacaacgctgcgctagctcttgggatcgccaaccagctgacgaatattctcagagacgtaggcgaagactcaaggaggggaagaatctaccttccattggatgaattggcagaggcaggtctgacagaagaagacatattcagagggaaagtgactgataaatggaggaagttcatgaagggacaaattctgcgtgccaggttattctttgatgaggcggagaagggcgttgcgcatctagactctgcgagtagatggccggttctggcatctttgtggttataccggcagatccttgatgctatcgaagcaaacgactacaacaacttcaccaagcgcgcgtatgtaaacaaggcaaagaagctgctgtctttaccggtcgcttatgcaagagcggcagttgcatcatga</cdnaseq> |
| Protein Sequence |
<aaseq>NPNHSTRAASPNPTSPRAPDGVLLVGGGALDGGAPPPRQLHQDP RHLPPASPAEGEEAGRRRLVGEAAAGREPGGGHGAGGRGVEEDGGGGGRLRGTQLMTP ERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKRLEDLFEGRPYDMYDAALSD TVSKFPVDIQPFKDMIEGMRLDLWKSRYRSFDELYLYCYYVAGTVGLMTVPVMGIAPD SKASTESVYNAALALGIANQLTNILRDVGEDSRRGRIYLPLDELAEAGLTEEDIFRGK VTDKWRKFMKGQILRARLFFDEAEKGVAHLDSASRWPVLASLWLYRQILDAIEANDYN NFTKRAYVNKAKKLLSLPVAYARAAVAS</aaseq> |
| Gene Sequence |
<dnaseqindica>2702..2851#2422..2614#1907..2142#1605..1777#1439..1489#3..288#acaaccccaaccattcgacccgcgcagcgagccccaaccccacatcgccgcgcgcccccgatggcgtcctcctcgtcggcggcggcgctctggacggcggcgccccacccccacggcagctgcatcaggatccacgccatcttccaccagcgtcaccagcggagggggaggaggccggtcgtcgtcgcctcgtcggtgaggccgctgcaggccgcgagcctggcggtggccacggcgccggtggccgtggcgtcgaggaggacggcggcggaggaggccgtctacgaggtcgtgctgcggcaggcggcgctggtggaggaggccacccaccgccgcggcgcgggggcgccgcggtgggcggaggaggacgccgtcgactggggcctcctcctcggcgacgcctaccaccgctgcggcgaggtctgcgccgagtacgccaagaccttctacctaggtcagccaacccaacattgactaatcattcaattttgtttttgtcaccgttattactttatcatttcacaggtgaaagctagctactattcgtttgccactactactccctagcttagctagcgtctcttccttttcttgatttgttcatagtactgtatatgataattgtagacctaccctttctctatttctttttgggttcttgggtggaatggctggcttgataaaattttgcgaccctttttgtggttctaggagccacatctcactttcactttcttgtacttgttggtctaaaaagattagttaatgctgcaattagttggcttttactaggaattgtaagagggtggtgttaaaaggtgattaaaaaaaaatctatgaacattcctagattcctattacgtgttaagaagataaatattcctgcgtataatttatggaatactccttctgatggcaaaaatatattagcagtagccaaacaacaccagcctgagtgagtgagtggctctcagtgctctgaacaactgtacatgtatatacaaatgtttgccgacttcagagtaggtaagataatgcacttggatgatagatgccatcccaaggaaatgatccaacaagcagatgcgcagatatggtgatctctctagtgcaccactggcaatttatagatttctcttcttaattagggtcagggatatgctggttggtggtgggtttgtgggtgatgtgaggacgcatgggcttgattgatgaatccagtaaccttcttgttttttttaatcttgctttctgtatcaccgtgtttccacttggatcatccctgacctggtaagggactcattttctattgctatgaggaccttttggggactagctcaaactctgatgtatggttgatacttagattttctacgtaaagtggaatttcaccttgtgtaatttctcatggtttttgtttccatcgtttacatttcaggtactcagcttatgactcctgaaaggcgcaaagctgtctgggcaatctatggtatggattagttaactattcattgatctaccagttactctcacttgtgaaaattcagataacttcaattgtttgtggaatttttaattcttacctttgtttttgtctttggcagtatggtgcagaagaactgatgaactggtagatggccctaactcgtcttacattacaccaaaggcacttgatcgatgggagaagagattagaagatctcttcgaaggcaggccatatgatatgtatgatgcagccctctcggacacagtgtcaaagtttccagtagatatccaggtacagccaacaaaaaagctactgtaaaagcaggatatgaagtgcttttaaaagttattagtacacagtaaattggtgacacgcatttgtctgatgtttctgcaccgtcgggatctcttttatttacagccattcaaagacatgattgaaggaatgaggcttgacctgtggaaatcaaggtataggagctttgatgagctctacctctactgctactacgttgctggcacggttggtctcatgacagtaccggtgatggggattgcccccgactcgaaggcctcaaccgagagcgtgtacaacgctgcgctagctcttgggatcgccaaccagctgacgaatattctcagagacgtaggcgaagagtaagtaccaatgtgctcactaccagcatgttctttttctgagttaataattgcagactttcacatgataaatatgtagtttgacacccaatatgtattgcacaaaccatttgcgctttaaagtctagtccaaaattgtgcctaaacagatgcctttcacattaaaaatttgaagcgcacataagtttaatttaaggcatatgtaccgatttgtcgctattgagattaagttttttggttgattgtgatgtaatatgtttgttgtggatggaatttcagctcaaggaggggaagaatctaccttccattggatgaattggcagaggcaggtctgacagaagaagacatattcagagggaaagtgactgataaatggaggaagttcatgaagggacaaattctgcgtgccaggttattctttgatgaggcggagaagggcgttgcgcatctagactctgcgagtagatggccggtatgagaggctacaaattctgcggttttatgttccacaaataaaataaaccactgaaatttaccttaatcgattattttctcgtaggttctggcatctttgtggttataccggcagatccttgatgctatcgaagcaaacgactacaacaacttcaccaagcgcgcgtatgtaaacaaggcaaagaagctgctgtctttaccggtcgcttatgcaagagcggcagttgcatcatgaacaatcactagatcagatgccttattattttttttctttcattttcttttcttttgatttcgcacgatttcttggctgttgtatatattcaagcagctacctgtatgccataagcctgccacagtttttctttagttcaagggactgatttcaggtccctcaatactcaactcttgttagaaacaaatacagagggggtaagccccacagttcaagaagcatattactcttcatttgtcttc</dnaseqindica> |
| External Link(s) |
