BGIOSGA015022

From RiceWiki
Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015022| Description = BGIOSGA015022| Definition = Oryza sativa Indica Group BGIOSGA015022, complete gene.| tag = | tid = BGIOSGA015022-TA|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015022

Description

BGIOSGA015022

Definition

Oryza sativa Indica Group BGIOSGA015022, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA015022-TA

Ensembl Protein ID

BGIOSGA015022-PA

Length

7470

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20271451..20278920

Sequence Coding Region

20278900..20278920,20277436..20277589,20276431..20276966,20273204..20273335,20272925..20272986
,20272222..20272295,20271451..20272046

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20271451..20278920 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20271451..20278920 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGATTTGAAACTAGTAAGAGAACGGCCCATCTCAAGCACAGATAAACCCATAGAGAAGACTGAAGAGAACTACTTCCTGGGTTTCTCCACCCCAAGGAGCTTAGCTGTTGAAGAGATCCCTGATGTCATCAAGCATTTCACACTTGCTGCCAAAAATGCCTTGGAGGCTGGTTTNGATGGGGTTGAGGTTCACGCCGCAAACGGCTTCCTCCTGGACCAGTTCATGAAGGACGGCGTCAACGCCCGCGCCGACGAGTACGGCGGCGGCGTGGCGGGCCGCTGCCGCTTCGCGCTGGAGGTGGTCGACGCCGTGGCGGCGGAGGCCGGGGCCGGCCGCACCGGCGTCCGCCTCTCCCCGTACTCCCGCTGCCTCGACTGCGCCGACTCCGACCCGGACGCGCTCGCCGCCCACATGGCGCGCGAGCTGGGCTCGCGCGGCGTCCTCTACTGCAACGTGGTGGAGCCGGAGATGGTGGCGACGCCGGCGGAGGGCGGCAGCGGCGGCGAGACGATGCGGATCCCGCACCGGCTGCGCGCCGTGCGGGAGGCGTTCGCCGGCACGCTGATGGTCGGCGGCGGGTACGACAGGGAGGAGGGCAACTGGGCCGTCGCCGGCGGCTACGCCGACCTCGTCGTCTTCTGGCCGCCTCTTCCTGGCCAACCCGGACCTCCCCCGGAGGTTCCGGCTCGGCGCGCCGCTCAACGGTCATTCAGATGGTTGACTGTGGATGATCAAATATATCAGCGGCTGCCAAACGTTTGTGTATTCCTGAAATATGTGCCACTGACTCTGAGAATAGAGTACGATTGGAATAACAGTGGAATATGTAAGTTGAGTAGAACAACCAAAGGAGGCCTTTTGATTGCTGAGGCCACTGGAATCTCAGACACTGCTCAAGGGCGATTAGAGACTGATGAGATCCCTTTCGTCGTGAATGATTACAGGGTTGCTGCTAGAAATACAATTGAAGCAAGATTTGATGGTGTTGAAATCCATGGAGCGCATGGTTATTTGATCGATCAGTTTCTAAAAGACCAAGTCAATGATCGTACCGACAAATATGGTGGGAGCTTAGAGAATCGCTGCCGGTTTGAGCTAGAAGTGGTCCAAGCCGTAGCTGATGAAATTGGAGCTGACAAGGTTGGGATAAGGCTGTCACCCTTTGCCAGCTATTCAGAGGCAGCAGACTCAAACCCAGAAGCTCTAGCCCTGTTCATGGCAAAGGTGCTAAACAAGTTTGGAATCCTTTATTGTCACATGGTGGAGCCACGGATGGTAAAACTTGGTGAAAACTTTGAAACCCCACACAGCCTTCGTCCAATCAGGGACGCTTTCAAGGGAACGTTTATTGCTGCAGGTGGCTACAATAAGGAGGATGGAAATAAAGCAGTATCCACTGGATATACTGATTTGGTTGCTTATGGGCGCTTGTTTTTGTCTAATCCTGATTTGCCTCGGAGATTTGAAATAGACGCCGCCCCTCTCAACAAGTACAACAGAGAGACTTTCTACATCTCTGATCCAGTTATTGGATACACTGACTATCCATTTCTTACATCAGATGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MDDLKLVRERPISSTDKPIEKTEENYFLGFSTPRSLAVEEIPDVIKHFTLAAKNALEAGXDGVEVHAANGFLLDQFMKDGVNARADEYGGGVAGRCRFALEVVDAVAAEAGAGRTGVRLSPYSRCLDCADSDPDALAAHMARELGSRGVLYCNVVEPEMVATPAEGGSGGETMRIPHRLRAVREAFAGTLMVGGGYDREEGNWAVAGGYADLVVFWPPLPGQPGPPPEVPARRAAQRSFRWLTVDDQIYQRLPNVCVFLKYVPLTLRIEYDWNNSGICKLSRTTKGGLLIAEATGISDTAQGRLETDEIPFVVNDYRVAARNTIEARFDGVEIHGAHGYLIDQFLKDQVNDRTDKYGGSLENRCRFELEVVQAVADEIGADKVGIRLSPFASYSEAADSNPEALALFMAKVLNKFGILYCHMVEPRMVKLGENFETPHSLRPIRDAFKGTFIAAGGYNKEDGNKAVSTGYTDLVAYGRLFLSNPDLPRRFEIDAAPLNKYNRETFYISDPVIGYTDYPFLTSDV</aaseq>

Gene Sequence

<dnaseqindica>1..21#1332..1485#1955..2490#5586..5717#5935..5996#6626..6699#6875..7470#ATGGATGATTTGAAACTAGTAGTGAGCTATACTATTAAACTGGCTCTTATAGACTGCTACAGTACCTTCTATTGTAGAAGAGAAAAATAGCACAGTAACTTGGTTACTGTTTATTTCCTAGGCTGAATGCTGGCCCTATCAATTTCCCACATTCCCCTCCTTTTGCGAATTTGCGACTGCGACAAAGGAAGACGACGTTGGACGAGCGCCACCCGCACGAAATCACTCCGCATCCTTCTGCTTTTGTAATCGAGTTACAGCTCTAAATTTTTCTGATCTTTCAACTTGGCATGCAGAGCGTCAAGATGGGGAAGCGGCGCTAGCACAGCTCCACCTCCTCACACCCTGGAAGATTTGATCTTTCCCACAGGTTTCGCCTTCTCTTTGCCCTATCTCGTAGTCTACCTGAATGAATGAATGGATGTACTGTGCCCTCCCAATTTTCGAGTTCCTAATTGACAGCTCAGTCTGATTAAGAAAGTACACAAGATCGCAACTGGCGTCGATTCGTTAGATCTATTCTGTTTAGGTGATCTCTGACGCATGAGATGCCATCCCAGCACCGGTTATTGGATAGGACGGTGAAAGAGAGAGAGAAAAAAAACATGAACATGTCATTTTGGGTGCCAAACATAGCAAGATAGCAAAGATTGCCTTTTTCCAAATTAGGTAGGAGGAATCCATGGACCTCAGATCGTGGTTTCGTCATCTTTGTTCTCTGAATCACTGAATGTGTTTTTGCTTTGCTTGTACTGTTTGTTCATAGGACGACTAGATTCTCCCAGTTCATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCACTTTTTGCTCTGGGCAAGTTGGGATGGTGGTCCTGTATCTTATTCTACTAGGAAGAATCATGTGGTGCCCCGATATGTGGTGTTTATTACAAAGAACAGATACATTTGTACTGAAATGACAGCGTAATCGACCAGGTTTTGAGCAGAAAGGCTCGGCCGTGGATGGCTCAAAACAATGAAAATTGAAATGTACTGTTATGTATGCGGAAATCATAATTAGGTCCAAAATTGTGATGTTTTCCGAAGAATCGCAGGTTCTCCATCGTCAGTTTATATCAAGTAATAGACAAGATAATAATATATCTGTCACGACTTATAAGCAACAAGTTCAATGATTTCTCTCTGAAAACTGGCAAGATCTATATCCATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCAATTTCAGAACGTTTGGAGGGTGAAATGATAATTCTAAGTTTCTAACTAATGGACATCTCCTGTTAATGTGGCTAGAGAGAACGGCCCATCTCAAGCACAGATAAACCCATAGAGAAGACTGAAGAGAACTACTTCCTGGGTTTCTCCACCCCAAGGAGCTTAGCTGTTGAAGAGATCCCTGATGTCATCAAGCATTTCACACTTGCTGCCAAAAATGCCTTGGAGGCTGGTATGTTCACTTCATTTAAGTTCAAGTGAGAGGCAAATAATTACGAATTAAAAGTGAACCATCACTTCATATACATACTCAAGGTCCTTCCGAATGCATGAGTTTTTTATGTTCTGGATGGAAATTAAACTGTTTAGTAGTATGAAATTTCTGTGTTTTAGACTAGGTCTAAATTGGAAAAGGCTATACGTGCGCTTTTTTTTCTTACAAAACTTTTACAAACATGATACATCATGTTGTTATTGAATCTAACTAAATAGCTGCAAGTATCTAGTTAAATCAAACCGTTTGGTAATTTTGTTTGTTAGAATTCTGTAAGATTTGTTGGTGTAGAGGCCTGGATTTTATCATTATGAAAAAAAAAAGAGTTATGCAAGAAATTTCGATCTATTTTTATTTTATTAAGAATTTTATTTGAATTCAGCCTAAATTTCTCTGTTGAGCCACCGACGATTTCAATTTTTCTCAGGTTTNGATGGGGTTGAGGTTCACGCCGCAAACGGCTTCCTCCTGGACCAGTTCATGAAGGACGGCGTCAACGCCCGCGCCGACGAGTACGGCGGCGGCGTGGCGGGCCGCTGCCGCTTCGCGCTGGAGGTGGTCGACGCCGTGGCGGCGGAGGCCGGGGCCGGCCGCACCGGCGTCCGCCTCTCCCCGTACTCCCGCTGCCTCGACTGCGCCGACTCCGACCCGGACGCGCTCGCCGCCCACATGGCGCGCGAGCTGGGCTCGCGCGGCGTCCTCTACTGCAACGTGGTGGAGCCGGAGATGGTGGCGACGCCGGCGGAGGGCGGCAGCGGCGGCGAGACGATGCGGATCCCGCACCGGCTGCGCGCCGTGCGGGAGGCGTTCGCCGGCACGCTGATGGTCGGCGGCGGGTACGACAGGGAGGAGGGCAACTGGGCCGTCGCCGGCGGCTACGCCGACCTCGTCGTCTTCTGGCCGCCTCTTCCTGGCCAACCCGGACCTCCCCCGGAGGTTCCGGCTCGGCGCGCCGCTCAACGGGTACGACAGGGCGACGTTCTACACCGCCGACCCCGTCGCCGGCTACACCGACTACCCGTTCCTCGACGACGACGGCGACGACGGCCTCGCGGCGTCGGCGGCGTCGGCGAGCTCCAACAAGAGCGGCGATCAGGACGGCGTTTAGCTCCGAGGCAGTACACTACTGCAACTGCACCTGAATAATTCTTAGCTTTTTTGCTGCTGCTTAAGCTTTAATAATGTTGACAATCGAGAGCTCTCTTCGTTGATCCAAACCATATGTTTCTGTCTGACATGACACTGTGACATGTGTATGCTCGCTGCGACAGCCGACAGGGATTCTAATTACTCGAGTGGACGTCGTTGGTTGATATCCTAGCAACTAGGCCAGTGAGACGCGCCGTGGGCTAGGCCCACCTACGCCCACGCGCGGCTAACGACGAGGAGTGAGTACCACGCTCGCACCTCATCCACGCGTACCGATCGGATGCGCACCGTTCTCCATAATGGATTTTCCCTTATCTCCTCTAGCACAACAATTAAAGGAAAATGCCAGTCCATACCTATGTGATGATCTATGTGCGATAAACCACTTCTGATAAACCCTAGCGCCGATCCTAAGAAGGAGACCCAAAAACGCCGTCAATGCATGTGGCGCCCAGAAGGGCAACGCCACACACACCATGAACCTCTGCTCCGACTCTAGCGATCAGCTACCGTGACCCCAACTCTACTGATGATCCCTACGGCGGCTAAGATGGCTTCGAGCTCCATATATTGGTCAGTCAATTTCACCATTCCACATATGCTCAAGTGATCATGTATGTGCTAAGGCTAAAATTATGAGTTTAAGACCTACTCTCTCCGTCTCAGATTATAAATCGTTTTGATTTTGGTCAAAAGTCAAAGTCACTCTAGTTTTGTAGAAAAAGTAGTAACATTTTCAATCTAAGACAAATATATTATGAAAATATATTCAATTATTGATTTAAAAAAACTAATTTGATGGTGTAAATATTACTATATTTGTTTACATAATTAGTTAAATTTGGAGTAGTTTGACTTTTTATGTGTTGTTTTGTTCAAATTTATTCAAAGTATATACTAGTGCCATACTGCCATGTTCTTCCCGAAGTTGTTTCAGACCAAGAGATCATTTCAGCATGACCAAAATGATTAACGATCGAGCTCTTTGGGCCTTCCATCAGAGCCCATATTGCTCTACTCCACCATAGCATTCTGGTCCAGCTAAAGGCCCATTTCTTAGATGAAAAACTTCCTTCTATTTAATATTGTAAGTCGTTTTATTTTTTTAATCAAACTTTTTAGGTTTAACTAAGTTTATAGAAAAATTAAGTAACATCTACAATATTAAATTAGTTTCATTAAATATAACATTGGATATATTTTGATAACATGTTTGTCTTGTATTGAAAATATTGCTAGTTTTTTTTCCATAAAGTTAATCATTGCTAAAACAATTTGATTAGAAAAAAAATTCAAATCGATTTATATATGAAATGGAGGAAGTACAAAGGAGTAGTATTTAATAATTCAATAAAAAACACTAATATCCAAGACACAATGTGAGTACTTAAAAAACACTTATATTGTTTGAGTATGTTTTTCTAATGGATCTGATTATCCGATAAGAGATCTTGTGGTATGAGTCTATTATACTGAAATATCTCTCTTGTGTTTTATCGGATAGAGATGGAGATGAAGATGAAGATAAAAATGGTGTATAGTACTGTGTACTACTGTGTACCCTTTTTCAGGTTGTTTTCAAGCTCTAGGTGCTCCATCTCTCTCATTGAACAAGCTAGAACACCAGCATTTGAATTGTTGCACATAGGGACTACTCTTATATCTCCACCCACTCTGTGACCACGATACTACCATAACAACCACCAAGATTTTTCGATGACAATGGGTTAGAGGAAAGGTGAGGTGGGTTAGGACATGGAGGAAGAGAGGGTGTACCTAGGGCTTAGAACCAACCAGGGTAGTGACAACTCGATGATAAATGTATTGAAGATGATGGTTAGCTGATATTGGTGTGGGTTAGCGGTGGAAGCAAAGAAAATGGAGTGCTTAGAGGCAGGAGTACAAGGGGAAGGAGGCAGTACCGCAGTAGTGGATTCGGCTGTGAAACGATGAAGCTCGTTAACAAGTTGAGTTGAGGAGGGAAGAGCCGTACGGGGCAGAGGGCAGTATAAGCTGTGGGGTCACCTAAGCCAATAACCTTTTCACAAACACTTTTATAGATTTCATCCATTTTTACATATAAATCTTTATAATTTACAGAAATGACTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAGGTTGGGATAAGGCTGTCACCCTTTGCCAGCTATTCAGAGGGAGCAGACTCAAACCCAGAAGCTCTAGCCCTGTTCATGGCAAAGGTGCTAAACAAGTTTGGAATCCTTTATTGTCACATGGTGGAGCCACGGATGGTAAAACTTGGTGAAAAGTTTGAAACCCCACACAGCCTTCGTCCAATCAGGGACGCTTTCAAGGGAACGTTTATTGCTGCAGGTGGCTACAATAAGGAGGATGGAAATAAAGCAGTATCCACTGGATATACTGATTTGGTTGCTTATGGGCGCTTGTTTTTGTCTAATCCTGATTTGCCTCGGAGATTTGAAATAGACGCCGCCCCTCTCAACAAGTACAACAGAGAGACTTTCTACATCTCTGATCCAGTTATTGGATACACTGACTATCCATTTCTTACATCAGATGTCTAAATGTGCCTTTCAGTACTGAATTCTCTTCCACCTCTCACTAGAGTGGCACAGCAGCTACCATTTGTATTGGTAGGATTGAAGGATTATGGCATTTGATCTGAAAGTGTAGTTTTCATATGTGTGGCAAGGCATTGGTAAAATAATGTGACCATTGTGGTTTCAGAACTGCATGTGAATAAAGGGAAATGATAAGTAGATCAAGCAGTTGTTCATCTGTTGAAAATTTGATTTAGTTTGCATGCAACTATTGTGAGCTTGATATAATATCATGAGGCTTGCCTGTGCCCACTTTTGCTCTCAAATGTGTTCTCACAGTCATTCAGATGGTTGACTGTGGATGATCAAATATATCAGCGGCTGCCAAACGTTTGTGTATTCCTGAAATATGTGCCACTGACTCTGAGAATAGAGTACGATTGGAATAACAGTGGAATATGTAAGTTGAGTGTATGCAGACTGCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAATTAGAAACTGTTGCTCTGTTTATGCAATGATCCATTTTTTTACTGAAATTTTACTCGTGTGTCTAGGCTAGTTCTTGCACCATTGACAAGGCAGCGATCCTATGGTAATGTTCCTTAGCCTCATGCCATTCTGTACTATCAACAGAGAACAACCAAAGGAGGCCTTTTGATTGCTGAGGCCACTGGAATCTCAGACACTGCTCAAGGGTGTGTATCATAGATTGTTAGGCTGTGCCTTTATGAAATATCAGGAGCCATGTTCAATTACCTTTTGACGGTTCAGCAATCTTTAAAGATCAAATTTGTTTCCTGTATGCGTGCAAGGTACAAAGATACTCCTGGCATTTGTACAAAGGAGCAAGTGGAAGCATGGAAGCCAATCGTAGATGGCGTTCATGCCAAAGGAGGAATATTTTTCTGTCAGATTTGGCACGTAGGAAGAGTCTCTAATAACAGTATGTTTACTATATCTGATATAAGCCTGTTCTTTATCTATGTAATTGTAGTTATTTGCAAGCAGGAAACCTTCAAATTGGATTCTGGAAATTTTGAGAAATGCTTTTGTAAAAACCTACTGTATAATTGTTCACTGGTACTCATCGCAGCATAAGTTATGCCATCTTTGTTTTAAATGAAACTGTGCGGGCAAACTCTTGCTCATTTCTTTACTTGTTTTTTTCCTTTTCTGGGTATCCAACCAAGCAACCAACACATGTTCAGTATCACTATGCAGCTTTTCAGCCTAATGGGCAGGCTCCAATTTCGAGCACCAATAAGTCACTAAAACCTGCAGTAAGAGCCAATGGCATAGATGTTGCTACTTTCTCAACTCCTAGGCGATTAGAGACTGATGAGATCCCTTTCGTCGTGAATGATTACAGGGTTGCTGCTAGAAATACAATTGAAGCAAGTACACACCTTCCTATTACATTTGTCACACCAGATATTTTGACTAGGAATATTTTGATTATCTTAATACGGATATTGTGTTCACTTTTTAATAAATACCTAGTAGATTAAATGAAGATCCTTAGTCTTGACTCCTGATGGAAACATCTAACCTTCATATTTGATATAATTTGTAGGATTTGATGGTGTTGAAATCCATGGAGCGCATGGTTATTTGATCGATCAGTTTCTAAAAGACCAAGTCAATGATCGTACCGACAAATATGGTGGGAGCTTAGAGAATCGCTGCCGGTTTGAGCTAGAAGTGGTCCAAGCCGTAGCTGATGAAATTGGAGCTGACAAGGTTGGGATAAGGCTGTCACCCTTTGCCAGCTATTCAGAGGCAGCAGACTCAAACCCAGAAGCTCTAGCCCTGTTCATGGCAAAGGTGCTAAACAAGTTTGGAATCCTTTATTGTCACATGGTGGAGCCACGGATGGTAAAACTTGGTGAAAACTTTGAAACCCCACACAGCCTTCGTCCAATCAGGGACGCTTTCAAGGGAACGTTTATTGCTGCAGGTGGCTACAATAAGGAGGATGGAAATAAAGCAGTATCCACTGGATATACTGATTTGGTTGCTTATGGGCGCTTGTTTTTGTCTAATCCTGATTTGCCTCGGAGATTTGAAATAGACGCCGCCCCTCTCAACAAGTACAACAGAGAGACTTTCTACATCTCTGATCCAGTTATTGGATACACTGACTATCCATTTCTTACATCAGATGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015022

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015022&oldid=63916"