BGIOSGA015031

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Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015031| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015031, complete gene.| tag = OsI_160...")
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Gene Name

BGIOSGA015031

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015031, complete gene.

LocusTag

OsI_16021

Ensembl Transcript ID

BGIOSGA015031-TA

Ensembl Protein ID

BGIOSGA015031-PA

Length

3523

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20115760..20119282

Sequence Coding Region

20119017..20119282,20118145..20118345,20117798..20117975,20116279..20116541,20115760..20115904

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20115760..20119282 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20115760..20119282 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCCACCCCTCGCCGCGTTCACACCACCAGCCCCCTCCGCCAGAGCGGGACGGCAGCTTCAACTACGACATAGAGAGCATGGACGGCGGCGGCGGCGCGTGGCGAGGGCGGTACGAGTCGTCGGAGGTGCTGCTGCGGTACGACGACGAGGCCGGCGGCGGCCCGCGCCAGCCGCTGCTGCGGAAGCGCACCATGAACACCACCTCTCAGATCGCCATCGTCGGCGCCAACGTCTGCCCCATCGAGAGCCTCGACTACGAAATTGTGGAAAATGACCTTTTCAAGCAAGACTGGCGATCGAGAAAGAAGAAGCAGATATTTCAGTATATTGTTCTTAAATGGGCCTTAGTTCTGCTTATTGGCATGTTGACTGGAATTGTTGGCTTCTTTAACAATCTTGCAGTCGAAAATATTGCAGGATTAAAACTATTGCTCACAAGTGATCTCATGCTCAAGCAGAGGTACTTCACAGCATTTTTGGCATATGGTGGTTGTAATCTAGTCCTGGCAACTACTGCTGCAGCAATCTGTGCTTACATAGCACCAGCTGCTGCTGGATCTGGTATTCCTGAAGTTAAAGCATATCTTAATGGGGTTGATGCTTATTCTATATTAGCTCCCAGTACACTATTTGTGAAGATATTTGGTTCAATACTTGGAGTTTCAGCTGGATTTGTACTTGGAAAGGAAGGACCCATGGTACATACAGGAGCATGCATAGCCAACTTGCTTGGTCAGGGGGGTTCACGCAAATACCATCTTACATGGAATTGGCTGAGATATTTTAAGAACGACAGGGATAGGCGAGATTTGATTACTTGTGGATCAGCAGCTGGAGTTGCAGCAGCATTTCGTGCACCAGTTGGTGGTGTGCTCTTTGCTCTTGAGGAAGCAGCATCATGGTGGTTCAATCCACTTGCATCTCTACGTGCTGATGTGTGTTTCTCATGTGCCTTCCCAACCTCACTGTTACTTCAAATCTTCGATGGTAACACAATTGTCGAGATTGACCTCTTTACTTCTGAACAAGCAGATGCAAACTACTAG</cdnaseq>

Protein Sequence

<aaseq>MDGHPSPRSHHQPPPPERDGSFNYDIESMDGGGGAWRGRYESSEVLLRYDDEAGGGPRQPLLRKRTMNTTSQIAIVGANVCPIESLDYEIVENDLFKQDWRSRKKKQIFQYIVLKWALVLLIGMLTGIVGFFNNLAVENIAGLKLLLTSDLMLKQRYFTAFLAYGGCNLVLATTAAAICAYIAPAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYHLTWNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASWWFNPLASLRADVCFSCAFPTSLLLQIFDGNTIVEIDLFTSEQADANY</aaseq>

Gene Sequence

<dnaseqindica>1..266#938..1138#1308..1485#2742..3004#3379..3523#ATGGACGGCCACCCCTCGCCGCGTTCACACCACCAGCCCCCTCCGCCAGAGCGGGACGGCAGCTTCAACTACGACATAGAGAGCATGGACGGCGGCGGCGGCGCGTGGCGAGGGCGGTACGAGTCGTCGGAGGTGCTGCTGCGGTACGACGACGAGGCCGGCGGCGGCCCGCGCCAGCCGCTGCTGCGGAAGCGCACCATGAACACCACCTCTCAGATCGCCATCGTCGGCGCCAACGTCTGCCCCATCGAGAGCCTCGACTACGAGTAAGCCCCCCGAAGCCCGTGACCTCTCTCTTCTGATAATTCCTTGGTTGGGGAAAAGTTTGATTTTTATTGTTTGGCGGTGACGATCTGATTCTTGACGGATGATCCTTACTATACTAGTTTATTGTTTGACTTGGGCACAAGAAAGTTAGGATCCTGCCGTGCATTTAGAAGATGAAAACATGGTCCTTTTTGATATTTTAAAGGGGGAAACGGGTGATCTTGATGTGCCTTTTGTTGAAGTTCGAAAAGAATCAGATAATATATTGTTTAACGAACACTTGCTGTAAAATAATAACCATGTAATAGATTGTACGATGATGCTAGTGAAAAAGAAAAGGGAATTTTGGGCTTTGCTCCGGGGACGTGTCAATCATTTCTCTTCATGTAAACGAATATCATATATAAGCAGGACTGTGTTTTCATTTTTGTTGCAAAAATTTTAGACGGATTAAGATGTTTCTTTAACGGACTGCAACATACAGAAGTAATATATATCAAGAAATTGATAATAAGTTAACTACAATAGTTCCTGCAATGAATTTCTAAGGAAGCCAGGGATTGAATCCTGAAGAGAAAGAATAGCAGTGTGTTCAAGAATGCACAGTGCTTAATTGTTTACTTTGCCCGTTTAATTAGTCACTCTCTTAATTTTATACCGTGTATTTCAGAATTGTGGAAAATGACCTTTTCAAGCAAGACTGGCGATCGAGAAAGAAGAAGCAGATATTTCAGTATATTGTTCTTAAATGGGCCTTAGTTCTGCTTATTGGCATGTTGACTGGAATTGTTGGCTTCTTTAACAATCTTGCAGTCGAAAATATTGCAGGATTAAAACTATTGCTCACAAGTGATCTCATGCTCAAGCAGAGGTAAAGCTTCACTCTGGTGCTTTTGCTATTCTACCATAAGTGGCAGATTAATTCGGCTTCAAAAAAAAAAGTTGCAGATTAATGCCTCCTGCTCATTCTCCATATGGTTTGTTGATTTGATTCGATGGAGCAATTTAAATTTATTGACGGTGTGCTGCTTCCAGTGCAGGTACTTCACAGCATTTTTGGCATATGGTGGTTGTAATCTAGTCCTGGCAACTACTGCTGCAGCAATCTGTGCTTACATAGCACCAGCTGCTGCTGGATCTGGTATTCCTGAAGTTAAAGCATATCTTAATGGGGTTGATGCTTATTCTATATTAGCTCCCAGTACACTATTTGTGAAGGTAAGGTTTAAACTTAGAATAACATACATGCACAGTCAAGTAAGATTTCTTATATTTCATGTATATTTACACTATTTATTCTTTTCTGTCAGCTTATATTGTTGGATTGTTTAGATAATTTCCAACAATTGCATTTTTCACAGAACCTCCTAAAAAATATCCAACATTTTTCCAACTGTTGTTTCCTTCCCAGCCATAGCCCATAATTGTTTGCCCAAATTGTTTATTACAATCTACAATACCTAAATTATTATAAAATACGGCTAACAAGGCATTGATCTAATTGATATAGATGGAAACTAACTTGGTAAGCAAGGATCAATCTAAATGAGTTTGGCCAGGTGCCAAACTGCCTAGTTTGGGTTGTAGAATCCTTTCTGCAACAATGAAAACGAAGGAAGCCTAAAGGTAGTTTGGACAGAATTCTAGAAATAGGAATGGAGTCAACTTTTGGTGGTACCTACTTTGCTTATTACAAAATACATCCATTATACTAGCCACATAGTTGCGCTTTGCGCGACTTTTTGATCCTGTTTAAGAACTTTTGTATATGGTCTATTAGTTTACCTTAGCTCTTAATAAGGTTTTGATATAAGTTAATTTGTTTACAAAGTATCTATTGTCCTAGCCAACTATAAATATAGATAAGTTGTACTATATGTTTATAGGAGGAATCACTAGAAGCCTCTTCTTTCTTCTCTTTGTTCCCTTTCTCTTTTGTATGTATGTATGTATGATATATTTAGGAGGAGATACCAGAAATATTCGGAAATTTCCGTATGTTTAGCCCATTTGTGATTTTTTTTAATACATGCACTCTTTCGATCCAATGGTCATTATTTATCCGAACTCTTTATCCAACGGCTAATATATTTTTGATGATGTGGCACATCCTCGTGCAAGAAAGCTTGCTGCTTTCACTATATAATATATATTGGACAATCATCTTCATTTTATTATCGTTTTATATTTTTCAGCAATTAGTAAATGCGAAAGAGTGTCATTGTTAGTAGTAATATATTTCTCAGATTGGTGATGCCATGGCAGCATATGATACTTAGAAAAAAAAATATCAGTTGTGAAAGTTAGGAAAAAATTGGCATGTATCTTGCACTGTAATAGCTTCAGGATAATGGTGTATAAGTTATAGCAGGTTTGTTTGTTTCTGACTTTTAGTTCAGAGACAGACATATTTTGCTAATTGTTGGTCAGAATAAAATGACCATGTTCTGAAAATTTTCCTTTGTACTTCACAGATATTTGGTTCAATACTTGGAGTTTCAGCTGGATTTGTACTTGGAAAGGAAGGACCCATGGTACATACAGGAGCATGCATAGCCAACTTGCTTGGTCAGGGGGGTTCACGCAAATACCATCTTACATGGAATTGGCTGAGATATTTTAAGAACGACAGGGATAGGCGAGATTTGATTACTTGTGGATCAGCAGCTGGAGTTGCAGCAGCATTTCGTGCACCAGTTGGTGGTGTGCTCTTTGCTCTTGAGGAAGCAGCATCATGGTATCACCTCTTCTCAAGCTGTTCTTTTTCTTCGCACATTACATTTGCTTCAAAATTACTGTTTTACTTGCTGACACTCTTAAACTGGAAGTCTTGTTTCTAAAGAAGTAACCGTGCCAGTGGATATATAACTTTCTCAATCTAAAATCCACATGGAATGTTGTAGACTTCAATATTAGTCTAGGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCTGAGGTTTCCTTTTCCTGTTAAAAGTCTTACTGCTAGAAATATAATTGGACTAGTGGCTAGCCCATAAAGGCATAAACCCACATATACTAAACTCATTTTTACATGCCGATTCACTCAAATGACTTGTAAGGTGGTTCAATCCACTTGCATCTCTACGTGCTGATGTGTGTTTCTCATGTGCCTTCCCAACCTCACTGTTACTTCAAATCTTCGATGGTAACACAATTGTCGAGATTGACCTCTTTACTTCTGAACAAGCAGATGCAAACTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015031