BGIOSGA015042

From RiceWiki
Revision as of 04:07, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015042| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015042, complete gene.| tag = OJ00011...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015042

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015042, complete gene.

LocusTag

OJ000114_01.13

Ensembl Transcript ID

BGIOSGA015042-TA

Ensembl Protein ID

BGIOSGA015042-PA

Length

2404

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19892784..19895187

Sequence Coding Region

19895020..19895187,19894779..19894901,19894103..19894321,19892784..19893263

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19892784..19895187 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19892784..19895187 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGAGGTACGGGCTGCAGCTCCGCACGAAGCCGGCGGCGTCCTCGTCGTCGCGGGCGCCGCCGCCGCCGCCGGCCCGCCCCCTGGCGGCCTTCGCCGACGATGGCGACGATGACGTGGAGGCCGACATCCTCCGGCAGTCGTACAAGAAGCGATCCCAGCAGAAGGTGGAAGAGCAGCAGAAGAAGGCGATGGAAGAGGATCCCTCGGTGTTCGCCTACGACGAGGTTTATGACGACATGAAGCAGAAGGCCGCCCTCCCCAAGATGCAGGACAGGGTAGTTCGCGAGTCAAAATACATTGCGGCACTTAAGGAGAAAGCCGAACAACGTAAACGAGAGCAGGACATTATTTATGAGAGGAAGCTTCAAAAAGAGAGGAGTAAGGAAGACCACCTATATGGTGACAAAGACAAATTTGTTACATCTGCCTACAGGAAGAAACTTGAGGAGGAGCGGAAATGGCTGGAGGAAGAGAAGCGGCGGCAGCTTCAAGAAGAAAAGGAAGATGTTACTAAGAAGAAAGACTTGAGTGATTTTTACTTTGGTCTTAGTAAGAATGTTGCTTTCGGTGCACAGACACATGACAATACAAAACATGCTAAACCTGAAAAGTTAGACGAGAAAGTTCAAGATGCTAAAACTAGCAAGGTTGGTGCTGAAGTATCCGATCGCTCTCCTAAGCACAAAAGGGACTCCGGTGAAGGAGCAGAGACGGCCAATGAAAGTAGAAGTGTGGAAGAACCTGCTACAACTCAATCAAGGGATTCAGCTGCTGCTAGATCTACCGAGAAAAATGCAGATGTTTCCTTGGATGCTCCTCAGACCCAGACACCAGAAAATACCCAACCAGCTCCTCAGACCCAGAATCCACAGAATACTCAACCAGCACAGATCACGGATGAACACTATAAGAGAAATGCTGATGCACTTGCTGCTGCCAGAGAAAGAGCTCTGGCGCGGAAGAAAGCCAAAGCGCAGCAGATATGA</cdnaseq>

Protein Sequence

<aaseq>MQRYGLQLRTKPAASSSSRAPPPPPARPLAAFADDGDDDVEADILRQSYKKRSQQKVEEQQKKAMEEDPSVFAYDEVYDDMKQKAALPKMQDRVVRESKYIAALKEKAEQRKREQDIIYERKLQKERSKEDHLYGDKDKFVTSAYRKKLEEERKWLEEEKRRQLQEEKEDVTKKKDLSDFYFGLSKNVAFGAQTHDNTKHAKPEKLDEKVQDAKTSKVGAEVSDRSPKHKRDSGEGAETANESRSVEEPATTQSRDSAAARSTEKNADVSLDAPQTQTPENTQPAPQTQNPQNTQPAQITDEHYKRNADALAAARERALARKKAKAQQI</aaseq>

Gene Sequence

<dnaseqindica>1..168#287..409#867..1085#1925..2404#ATGCAGAGGTACGGGCTGCAGCTCCGCACGAAGCCGGCGGCGTCCTCGTCGTCGCGGGCGCCGCCGCCGCCGCCGGCCCGCCCCCTGGCGGCCTTCGCCGACGATGGCGACGATGACGTGGAGGCCGACATCCTCCGGCAGTCGTACAAGAAGCGATCCCAGCAGAAGGTAACTAGCTCGAATCCCCTCCCCCCAACCCCTCCACCGTCGCCGGCTGGGCCGTGCGGGTCACGAGTAGATTGACTTACTTATTACCCTTGTTTGGGGTTTGCGTTGCGTGCTGAAGGTGGAAGAGCAGCAGAAGAAGGCGATGGAAGAGGATCCCTCGGTGTTCGCCTACGACGAGGTTTATGACGACATGAAGCAGAAGGCCGCCCTCCCCAAGATGCAGGACAGGGTAGTTCGCGAGGTAAGTCTCCCTCTGATTTGATTACTTAATTCTCTTGGTGCTTTGTTTATGGTCACCGGGATGTTCCAAAGAGTATACATTATTAATTTTTAGTGAAGGGGTTGTATTATTTCCCCTCGTGGTACTGATTTAATGATGGATGTGAGGCAGTCGGGTTTTACTTTTGTTGCTGAAGCTTAGAGATTTTGTGCTGTTTGATAAAAAAAAAGCAGTAGTTGTTGCTTGAGCATAGGGAGTTTCATTTTTGGGGATTAGCAGCTGCCAGCTGGTATGTTTGCTAGATGTATATTGGAGCATACTTCAGGGCTAACTGAAATCTACCTTCATGGTTGATTGTCGGTAGTGCAAGTTTGTGATTTGCTATTTTTACAAGGAATTGTTTGGTTCTCCCAAATGTGCACTAGCACAGAGAGTATGTAAATGGCTACTCATCGTTTGAATGCTATGCTTCTCTCAGTCAAAATACATTGCGGCACTTAAGGAGAAAGCCGAACAACGTAAACGAGAGCAGGACATTATTTATGAGAGGAAGCTTCAAAAAGAGAGGAGTAAGGAAGACCACCTATATGGTGACAAAGACAAATTTGTTACATCTGCCTACAGGAAGAAACTTGAGGAGGAGCGGAAATGGCTGGAGGAAGAGAAGCGGCGGCAGCTTCAAGAAGAAAAGGAAGATGTAAGCTTTTCTCAATTTTTTTTCATGACTCTTGATTATGTGCATGTTTATCTCCATAATTTATTTCTACCAATGCTTCTTGTGTTGTCTCTTGTGAGGTTGGTCATAACAAAATTATGCATTAAACTTGATATTAATTGAATTGTTGTAATGTTTATAGTCAAACTCTTTAGTTTGAGTTCACAATCTTCAAATTCACACTAGTGTGCTGCATGCCCCATCTGTCTTGCTAGAAGAGTACGAGAGAGAAAAGAGAGGACCTTTTCACTTATTTTTATGTTATATTGCTATGCAAAATTGTAAACCTACCTTTTTTTATATGTTTTTAGCATTCTTTTTAAAGGACTGTCTTCACTTTGCTTTTTGCTGGTTACGAAAAACACTATCTTCTGGTTGCTGCTTACACAAGCAACCTTTCGGGAATCTGAAATATGTTTGTTGATCACCAAATTAATGCAATAGTTTTGTTTATCTCCAAATCAGATACTCCCTCCATCTCATAATATAAGGCGCGCATGCATTTGAAGTTTCAACATTTCAAACATTTGACCAACACTTAGTATAATATAAAATGAATTTTATTTGTTAAAAATTATACCATTAGATCGAGATTTAAATTTACATTCATATGGTTATAATTTTGTTACTACAAACCTTATGGTATATGAGAAATTATAAGCTAAACATTCGTTTTGAAGACCGTGCCAACTTTGACCGCGCCTTATATTATGGGATAGAGGGAGTATTTGCTAAGATAAAATTACTTCTAATGGTTCACAACAAAAAATTCTTTTGGCTCACTGTAACTGATTACGTTTCCTTCGTCTATTTTTGTACAGGTTACTAAGAAGAAAGACTTGAGTGATTTTTACTTTGGTCTTAGTAAGAATGTTGCTTTCGGTGCACAGACACATGACAATACAAAACATGCTAAACCTGAAAAGTTAGACGAGAAAGTTCAAGATGCTAAAACTAGCAAGGTTGGTGCTGAAGTATCCGATCGCTCTCCTAAGCACAAAAGGGACTCCGGTGAAGGAGCAGAGACGGCCAATGAAAGTAGAAGTGTGGAAGAACCTGCTACAACTCAATCAAGGGATTCAGCTGCTGCTAGATCTACCGAGAAAAATGCAGATGTTTCCTTGGATGCTCCTCAGACCCAGACACCAGAAAATACCCAACCAGCTCCTCAGACCCAGAATCCACAGAATACTCAACCAGCACAGATCACGGATGAACACTATAAGAGAAATGCTGATGCACTTGCTGCTGCCAGAGAAAGAGCTCTGGCGCGGAAGAAAGCCAAAGCGCAGCAGATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015042