Os12g0628500

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0628500| Description = Similar to Methionine aminopeptidase-like protein| Version = NM_001073862.1 GI:115489685 GeneID:4352851| Length = 37...")
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Gene Name

Os12g0628500

Description

Similar to Methionine aminopeptidase-like protein

Version

NM_001073862.1 GI:115489685 GeneID:4352851

Length

3713 bp

Definition

Oryza sativa Japonica Group Os12g0628500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27132765..27136477

Sequence Coding Region

27133210..27133275,27133607..27133745,27133873..27133909,27133991..27134098,27134330..27134429
,27134534..27134679,27134758..27134849,27134982..27135076,27135331..27135427
,27135519..27135662,27135808..27136025,27136109..27136219

Expression

GEO Profiles:Os12g0628500

Genome Context

<gbrowseImage1> name=NC_008405:27132765..27136477 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27132765..27136477 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcggctctgctgatgcagtgaccaaggagatggaggcgctactcgttggacaaaatccaaatgcggttagtggagaaacatgcgagacctcatcaaaagaaggcaaagttgcagatagcaatggatctcattcttcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggaggatcagaagctgcaaagaagaaaaagaagaaaagcaaatccaaaaagaagaaaggccctcttcagcagactgatcctccatcaattcccatagacgaacttttcccatcaggagatttccccgagggtgaaattcagcaatataaggatgataacttatggagaacaactagtgaggaaaagagggaactggagcggctacaaaagccgatgtacaatgctgttcgccgagcagcagaagttcatagacaggtccggaagcatatgaggagcattttgaagcctggaatgctaatgattgatctatgtgaaactttggaaaatatggttaggaaacttatcaaggagaatggtctgcaagctggtattgcctttccaacagggtgttccttgaattgggttgcagctcactggactccaaattctggtgataaaactgtactacaatatgatgatgtaatgaagttggattttgggacacacatagatgggtacatagtcgattgtgcattcactgttgcattcaatcccatgtttgattcattgcttcaagcctcaaaagatgccactaatactggagtcaaggaagctggaatagatgcacggctatgtgatgttggtgcagcaatccaagaagtcatggagtcgtacgaggttgagattaatggaaaagttttccaaatcaaaagtgtgcggaacctcaatggacacagcattggaccataccaaatccacgctggaaaatcagttccaattgtgaaaggtggagagcaaacaaaaatggaagagggggaattttatgccattgaaacttttggatctacaggaaagggatttgtaagggaggatttagaatgcagtcattacatgaagaactttgatgttggacatgtacctctgagggtagcaaaggctaagcaactacttggaacgattaacaacaatttcggaacgcttgctttttgtcgccggtacttggaccgccttggtgagaccaagtatctcatggcactgaaaaatctatgcgacgttggtattgttcagccgtatcctccattgtgcgacgtgaggggaagctatgtgtcacaatttgagcacaccatcttactccggccaacctgcaaggaagtcatatccagaggcgacgactactga</cdnaseq>

Protein Sequence

<aaseq>MAGGSADAVTKEMEALLVGQNPNAVSGETCETSSKEGKVADSNG SHSSPPEDDDDEAQGDGPSQDGGSEAAKKKKKKSKSKKKKGPLQQTDPPSIPIDELFP SGDFPEGEIQQYKDDNLWRTTSEEKRELERLQKPMYNAVRRAAEVHRQVRKHMRSILK PGMLMIDLCETLENMVRKLIKENGLQAGIAFPTGCSLNWVAAHWTPNSGDKTVLQYDD VMKLDFGTHIDGYIVDCAFTVAFNPMFDSLLQASKDATNTGVKEAGIDARLCDVGAAI QEVMESYEVEINGKVFQIKSVRNLNGHSIGPYQIHAGKSVPIVKGGEQTKMEEGEFYA IETFGSTGKGFVREDLECSHYMKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYL DRLGETKYLMALKNLCDVGIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY </aaseq>

Gene Sequence

<dnaseqindica>446..511#843..981#1109..1145#1227..1334#1566..1665#1770..1915#1994..2085#2218..2312#2567..2663#2755..2898#3044..3261#3345..3455#ctcaccgctcgccgaggttgccgtctccttgtctcctccgctccttgcgccgccgccgcgacgagtcgcggggaggggcggcgatctccatctccatctgaggcgaggagagcaggggaggtgaggggatcctggtgaggtgagcatccacgtcctctttctttttttctgattcatctctctctctctcgcacatcgggactggaatttgcttgcgttcgttcgttaagttaaccctagcttctcttctagatctggaagaaactcttcttcttttaatttcagagccttaaccttaatagtacaagtaacagtttgtttgttccccgaaaagtttggatgccttccaaatagagacacatgttatttattttggaatgtaatttgtccctggatttattcattcaggtttgtgattactggacaatagaaatatttacacaatatggctggcggctctgctgatgcagtgaccaaggagatggaggcgctactcgttggacaaaatccagtaagtgttatgctgctaaagtagtaaagttacatgaactatgtttgtaacactcattccaagcaagcaacatccttcctttactgtacgtatttaagaggatgggggactattacttccatcctcattcttaatatctcagttaggttatgtagagaccatggttagcctttccataacatgactgagtttatgtaattgcaactccaactagaaagtagtagtaatgacaccttttgtggtttctacgatggctagacctctcataacttctgccaatttgcccctgcattgtgcaagttcatctaaagtagcacacgttcatctgcagaatgcggttagtggagaaacatgcgagacctcatcaaaagaaggcaaagttgcagatagcaatggatctcattcttcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggaggatcaggtagctctactctgccttgcaagatctaattgccgagttactcatctaaaattgtggcttttgaaattatatgtagcattggtatgagattaatttaatagttttctttgaaactggtattctgcagaagctgcaaagaagaaaaagaagaaaagcaaatccaagtatgctctgttgttcaaatgaccattaatctctttattttgttttgttttgcgactgaccatgctttgtgtcttccgtagaaagaagaaaggccctcttcagcagactgatcctccatcaattcccatagacgaacttttcccatcaggagatttccccgagggtgaaattcagcaatataaggatgagtaagtacagcactatctaagtatctatccaacaatagaatgaaagaataccctttttaatatatttgtatcttgtggtatctaaagaaaacttcattaagatcattcttgcctcattgacaattttcttttcagttttacttgctagttgcaaactctatgagttgattatgaaattatagtgcgtatgtttgcataaagtaattgtgctattggcctattgatcttcagtaacttatggagaacaactagtgaggaaaagagggaactggagcggctacaaaagccgatgtacaatgctgttcgccgagcagcagaagttcatagacaggtacataatacactggcctttttcattgtttgtggtctctttcattgtttgcagctatgttttgaatctgtctgtttgttacaactccttaatatattttctaggtccggaagcatatgaggagcattttgaagcctggaatgctaatgattgatctatgtgaaactttggaaaatatggttaggaaacttatcaaggagaatggtctgcaagctggtattgcctttccaacagggtgttccttgaattggtatggtattgaatctctaagagtgcatcttcattctgcatgcttttgttaaattgatggggaatatgtaatgcatagggttgcagctcactggactccaaattctggtgataaaactgtactacaatatgatgatgtaatgaagttggattttgggacacacatagatggtatgtttattattttgcttcttccatcccttctgttgttgtctgttgtgatattttatctgggtttctccttgtgagtactcagctcatttctaactgcaaaaactaacttgatattgtgattctttacagggtacatagtcgattgtgcattcactgttgcattcaatcccatgtttgattcattgcttcaagcctcaaaagatgccactaatactggagtcaaggtaattttctacacattttggtgcatttgttggaaacagtttttggaaagttgatgcactcagatactaaagcgctatggttggtgtcagaatgagtgaggcactttttccgtagggacagatttttgtcctttttacacatgctaatgattttatagacacgtcaattcaaaagttgttaatttgttttctcctgtaatagcctcagcattgtactttaacagtgttttgattttttttcttttccatattaggaagctggaatagatgcacggctatgtgatgttggtgcagcaatccaagaagtcatggagtcgtacgaggttgagattaatggaaaagttttccaaagtgcgtgctactttgtattttttttcccaatctgcactgataatgtgaggttatatattgacaaagcaagacatttctgctttggtggcagtcaaaagtgtgcggaacctcaatggacacagcattggaccataccaaatccacgctggaaaatcagttccaattgtgaaaggtggagagcaaacaaaaatggaagagggggaattttatgccattgaaacttttggatctacaggtatatgcaactcaatagcttgaactaatagattgaaacacaaagtactcttttgtcacacttatactagtttgtgaatgtcatttacttatccctagtaggcatgttttcaagttcttgaagagttgtaccgtcatgtttgcaggaaagggatttgtaagggaggatttagaatgcagtcattacatgaagaactttgatgttggacatgtacctctgagggtagcaaaggctaagcaactacttggaacgattaacaacaatttcggaacgcttgctttttgtcgccggtacttggaccgccttggtgagaccaagtatctcatggcactgaaaaatctatgcgacgttggtattgttcaggtatgcaagaagctcaatttccactccaatgtctgaatgtgcccttacctatggttgctcactgttttctgctattcttgtagccgtatcctccattgtgcgacgtgaggggaagctatgtgtcacaatttgagcacaccatcttactccggccaacctgcaaggaagtcatatccagaggcgacgactactgattgcggctgtagcttgtcatgtaccggttgtttgtgagatcattgtgcaccattctgggcaacctgtgtactatcatgctatgtatgggatcatatggcggaatcatcagataaataatcgagagacgttttcagttttttgttttgttgtttacacgagataccaactatctgttgtctttcttgaaactttgaaatatgtaaaaaaaaaaaaagatgatcttcattgtgatggatgatcactaatggtcgcttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0628500, RefSeq:Os12g0628500