BGIOSGA015072

From RiceWiki
Revision as of 04:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015072| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015072, complete gene.| tag = OS04G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015072

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015072, complete gene.

LocusTag

OS04G0433600

Ensembl Transcript ID

BGIOSGA015072-TA

Ensembl Protein ID

BGIOSGA015072-PA

Length

3228

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19494448..19497675

Sequence Coding Region

19497663..19497675,19497248..19497558,19496655..19496980,19496469..19496561,19496299..19496389
,19496137..19496224,19495779..19495888,19495620..19495689,19495439..19495542
,19495088..19495204,19494936..19495012,19494772..19494813,19494448..19494667

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19494448..19497675 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19494448..19497675 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTGCTACATGCTGAAATCAAGAAGGCTCGTTGGTGTCGCCGATGCGTGGTCCGTGGATGATGGTGCGGATGGCATCAGCGGATTCCCCGACGCGATGAGCGCCGCTGCACACAAACAGATGGTCACTGGTGCCGAGGAAGCCATGCTGGGGAAGCTGGAATTGGATAGTCAATCCAATCTCTTCTCCAATAGTGATGATTTTCTTCTTTCCGGGAGCAGTAAGCTGGGAATTTCCGCATCAGAAGATATAGATTTGCCTGGGAAACAGGGATTGCCCGAGTCGACAACAGACAGGCCTGGAAGCAATGGATCAAGCAGGGTTCCCAGACTAAGAGTGCTTGGAACAGCCGGCATGGCTGGATTTGGGAAGGCAGTTGATATTTTAGACACTATAGGCTGCTTGGTAACAACAAGCCTTAGCACAGATGGCGGCTTTATTTCCAGGGCTAAAACCAAAGGATGTCCGATATCAATTCTTGCTTTTGAGGTTGCAAACACGATATTGAAAGGTGCTACTATTATGCAATCTCTTTCGGAAGACACTGTTACATACTTCAAACAAGTGGTGCTTCCTTCTGAAGGCGTGCAGAATTTAATTTCCAGTGACATGAGTGTGTTGATGCGGATTGTAGCCAATGACAAAAGGGAAGAGCTGAAAATATTTTCACAAGAGATTGTCAGATTTGGCAACCGTTGTAAAGATCCCCAATGGCATAACCTGGACCGCTATTTTGTCAAGCTAGAATCGGAAAATCCACCACAGAAGCAGCTAAAAGAAACAGCAGTTGCAGAGATGCAAAAGTTGATGGATCTTGTTCATCGTACAACTGATTTGTATCACGAGCTGCATGCGTTGGATAGATTTGAGCAAGATTATCGCTGCAAGCTGACGGTAAAGGGAAATTCATATCAGAAAGATAATCTTCCAGGAGAAAATATTGAGGTCGTGAGAATAGAATTGAAGAGTCAAAGGAACTATGTGAAAAGCTTGAAGAAAAGATCTTTGTGGTCCAAGACATTGGAAGATATTGTTGAGAAGCTTGTAGACATCGTGCAGTACTTGCATTTTGAGATCAACGCTTCTTTTGGATCTTCTGATGAAGGTGAATTGAGTTCTGAATCTACTGAAGACTGTCAGAGACTAGGACCTGCCGGACTTGCATTACACTATGCAAATATTATCATACAGATCTATAGCGTTGTTTCTCGATCAGGATATATACCACCAAATACAAGAGATGCTCTCTACCAAGGATTGCCACCAAGAGTGAGATCGGCACTACCTAATAGATTAAGAACTTCGTCGGTGCCTCAGGAGCTCAATATTGATCAAATTAGGGCTACAATGGATAAAACATTGAAATGGCTTGTTCCAATGGCCATCAATACCACGTGTGCCCGAGGCTTCTTGCGGTTTAGCGAATGGGCGAGATCAGGGACTGAGAGGGTTGGAAGGAGGCCAGGCCAACCGGACGTGGTCGAGACGCTCTACCATGCGGACAAGGCGAAGACCGAGGACTACATTCTGGACCTGGTTGTCTGGCTTCACCACCTTGTCAGCCAGAGTAACCGGCCGGCAAATGCAAAAGACAAAGACAAAGAGCAGTCCACCTCACCTCTAACCAAATCTGATCTTGACAAGGCACAACAAGAATAG</cdnaseq>

Protein Sequence

<aaseq>MDCYMLKSRRLVGVADAWSVDDGADGISGFPDAMSAAAHKQMVTGAEEAMLGKLELDSQSNLFSNSDDFLLSGSSKLGISASEDIDLPGKQGLPESTTDRPGSNGSSRVPRLRVLGTAGMAGFGKAVDILDTIGCLVTTSLSTDGGFISRAKTKGCPISILAFEVANTILKGATIMQSLSEDTVTYFKQVVLPSEGVQNLISSDMSVLMRIVANDKREELKIFSQEIVRFGNRCKDPQWHNLDRYFVKLESENPPQKQLKETAVAEMQKLMDLVHRTTDLYHELHALDRFEQDYRCKLTVKGNSYQKDNLPGENIEVVRIELKSQRNYVKSLKKRSLWSKTLEDIVEKLVDIVQYLHFEINASFGSSDEGELSSESTEDCQRLGPAGLALHYANIIIQIYSVVSRSGYIPPNTRDALYQGLPPRVRSALPNRLRTSSVPQELNIDQIRATMDKTLKWLVPMAINTTCARGFLRFSEWARSGTERVGRRPGQPDVVETLYHADKAKTEDYILDLVVWLHHLVSQSNRPANAKDKDKEQSTSPLTKSDLDKAQQE</aaseq>

Gene Sequence

<dnaseqindica>1..13#118..428#696..1021#1115..1207#1287..1377#1452..1539#1788..1897#1987..2056#2134..2237#2472..2588#2664..2740#2863..2904#3009..3228#ATGGATTGCTACAGTACGCGTCTACGTGCTCTTCTTTTTGGATCTTGCTGCTGCTATAGGATTGGAGGTGGAGGATTCCGCTCTGTGCTCACGGTTGGTTTGGTTTCTGTTTGGCAGTGCTGAAATCAAGAAGGCTCGTTGGTGTCGCCGATGCGTGGTCCGTGGATGATGGTGCGGATGGCATCAGCGGATTCCCCGACGCGATGAGCGCCGCTGCACACAAACAGATGGTCACTGGTGCCGAGGAAGCCATGCTGGGGAAGCTGGAATTGGATAGTCAATCCAATCTCTTCTCCAATAGTGATGATTTTCTTCTTTCCGGGAGCAGTAAGCTGGGAATTTCCGCATCAGAAGATATAGATTTGCCTGGGAAACAGGGATTGCCCGAGTCGACAACAGACAGGCCTGGAAGCAATGGATCAAGCAGGGTAAGTTGTGGACAAAAGTGAAGGCAATTTTCCTTTCACAAGCAGTTGTGTTTTCTTGAACTAGTGGGTAACTTTTTATATCTTGTTTGTCTCTGTTCATAAATACTATGCTAACTTTTAAGATACTATCAAGTGTAGGTGGTTGAATTGATATTTCTTGCTTGTTTTACCTTAAGAGCATTACAAAATGAAATGTACAATTCCTGAAATGTTTAACTTTCTTAGTAGAAATTACGATATCCTTAAATCCCCGACATTTCCTTGCAGGTTCCCAGACTAAGAGTGCTTGGAACAGCCGGCATGGCTGGATTTGGGAAGGCAGTTGATATTTTAGACACTATAGGCTGCTTGGTAACAACAAGCCTTAGCACAGATGGCGGCTTTATTTCCAGGGCTAAAACCAAAGGATGTCCGATATCAATTCTTGCTTTTGAGGTTGCAAACACGATATTGAAAGGTGCTACTATTATGCAATCTCTTTCGGAAGACACTGTTACATACTTCAAACAAGTGGTGCTTCCTTCTGAAGGCGTGCAGAATTTAATTTCCAGTGACATGAGTGTGTTGATGCGGATTGTAGCCAATGACAAAAGGTTGAAGAGATGATTGATGGTTGTTCTCAATGTTTCATTGTTACCATCTGACAACCCAATAACTGTTTTGTGCACTCTGGCTAATATTTGCAGGGAAGAGCTGAAAATATTTTCACAAGAGATTGTCAGATTTGGCAACCGTTGTAAAGATCCCCAATGGCATAACCTGGACCGCTATTTTGTCAAGTAAGAGTTTTCATGTTTTTGCATGTGGCAATCGTTATAAAGATTAGACTTTAATCATACTTGTTACTTCGGAATCTAGGCTAGAATCGGAAAATCCACCACAGAAGCAGCTAAAAGAAACAGCAGTTGCAGAGATGCAAAAGTTGATGGATCTTGTTCATCGTACAACTGTAAGCATTGTGCTGTAGTTCAATATATCATTTGATTAATCTAGGTTTTGCTCATTTTGGCTGTTTTTTTCCAGGATTTGTATCACGAGCTGCATGCGTTGGATAGATTTGAGCAAGATTATCGCTGCAAGCTGACGGTAAAGGGAAATTCATATCAGAAAGGTATGATACCTATTTTACAAAATCCTCTAGCTATTTCTTGGACAGAGTGACAAATATTTGTGTCAATAGTTCTGTGCCCATTACCTAACCAAATGATATTCATGACCCAAACAAATGACTTAGATGTGGATTGCTCAAGCTAAGGGAAAAATGTTATTTCTTTGTATTTTCAATATCCATATCTATTTCAGTTAAGTTGTCAGAGCAATGCCACTTTTAATCTTTTGGAATTTTGGCACTGTGTCCAGATAATCTTCCAGGAGAAAATATTGAGGTCGTGAGAATAGAATTGAAGAGTCAAAGGAACTATGTGAAAAGCTTGAAGAAAAGATCTTTGTGGTCCAAGACATTGGAAGATGTGAGAACAATTTACTGTGGAATTCCCTTTATATTCTCTGTTGACCTTTCCTTTTGTTTATAACATATAAGATTCATTTCTTTTTATAGATTGTTGAGAAGCTTGTAGACATCGTGCAGTACTTGCATTTTGAGATCAACGCTTCTTTTGGATCTTCTGGTACTTTCATGGTCCTACTTCTCATGTTAGAATCGATCATACAGGACTATCCACTGATCCTTGTAATATATTTGTAGATGAAGGTGAATTGAGTTCTGAATCTACTGAAGACTGTCAGAGACTAGGACCTGCCGGACTTGCATTACACTATGCAAATATTATCATACAGATCTATAGCGTTGTAAGTTCCCTCAGATTTTGCCTGCGACGTCTGCCCAAGATTTGGCATGATTTGGCTATCTTATCATAGATCAATTGGAAACTACTACACATTTGTCTGTAGCTTTAGCATATGTATATTGTACCCACTTAACATAAGAGTGGCAGAGCACCAAAGAGCGTAATTGGTATTTTCAGCAAAGCCCACTAGCTAGTATTTGCATGTAGCTATTTTACTAAATTTTGTCTGTTTAAGGTTTCTCGATCAGGATATATACCACCAAATACAAGAGATGCTCTCTACCAAGGATTGCCACCAAGAGTGAGATCGGCACTACCTAATAGATTAAGAACTTCGTCGGTGCCTCAGGAGGTGATACCACTACACAATGACAGAACTATGGTTATATAAAAATTTGTATTCTGAAATCCTGATTTTCTGTTGCAGCTCAATATTGATCAAATTAGGGCTACAATGGATAAAACATTGAAATGGCTTGTTCCAATGGCCATCAATACCACGTGGTACTGTGCTTTGTTACGTAGTAATGAATGTCTTAAGCTTCATTGAATTTTAGCTTTTCGAGCGTTCAGGATTATAACTACTTTTATGCTCTGTTTGCATGAATTCTTTAATTGAACTCCAGTGCCCGAGGCTTCTTGCGGTTTAGCGAATGGGCGAGATCAGGGTAAGAACTACATTATCGAATGCCCTACGAGTTCGTTGTGCAAACTAAGATTTCCTTCACACATGGCATTTACATTTTTGGTTTCGTATGCTGTTTTCATTCAGGACTGAGAGGGTTGGAAGGAGGCCAGGCCAACCGGACGTGGTCGAGACGCTCTACCATGCGGACAAGGCGAAGACCGAGGACTACATTCTGGACCTGGTTGTCTGGCTTCACCACCTTGTCAGCCAGAGTAACCGGCCGGCAAATGCAAAAGACAAAGACAAAGAGCAGTCCACCTCACCTCTAACCAAATCTGATCTTGACAAGGCACAACAAGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015072

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015072&oldid=63966"