BGIOSGA015091

From RiceWiki
Revision as of 04:08, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015091| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015091, complete gene.| tag = B0222C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015091

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015091, complete gene.

LocusTag

B0222C05.4

Ensembl Transcript ID

BGIOSGA015091-TA

Ensembl Protein ID

BGIOSGA015091-PA

Length

2882

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19241299..19244180

Sequence Coding Region

19244082..19244180,19243871..19243993,19243636..19243773,19242811..19242909,19242407..19242710
,19241787..19242010,19241606..19241692,19241299..19241466

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19241299..19244180 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19241299..19244180 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCCTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAKWQEAPAPGVRVLLFAVAAAALLLVVSARKVGETCAADRNCDAGLHCETCVADGNVRPRCTRVTPVDPQTKARDLPFNRYAWLTTHNSFARLGTRSRTGTAIATAWNQQDTITDQLNNGVRGLMLDMYDFRNDIWLCHSFGGACQNFTAFVPAVEVLGEIERFLARNPSEVVTVFVEDYVESPMGLTRVLNASGLTKYVFPAWRMPKSGGDWPRLSDMVRDNHRLLLFTSKSAKEAAEGIPYEWHYVVENQYGTKGMIKGRCPNRAESAAMNDLSRSLVLVNYFRDLPNFPVACKDNSAELLDMLTTCHDLSADRWANFIAVDFYKRSDRGGAAEATDRANGGLVCGCGSVSACSGNGTCTTARHGGTPKGIFNATSGATALLRPPTATLQWQQLIILVPSTLAALLLSL</aaseq>

Gene Sequence

<dnaseqindica>1..99#188..310#408..545#1272..1370#1471..1774#2171..2394#2489..2575#2715..2882#ATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTACGTACGCGGTACGCGCGCTGTTTAATTAGTTGGAGGGGGGAATTGGTGGGTTAAAATGGAGGGTGTACGTGTGCGTACGTTGCAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGTAGGTAATTGACGTCGCGGTTTGGTTTCTTCCTCTCCGAGTGCGCGGCGGCGCTGACTGACCGCATCCGAATTCCGGCGGTTTGTGTGCTGTGCAGGCGCGGGACCTGCCGTTCAACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACGTAAGTCCTTTCCTTTCGTTCGCACTTCCCAATCCTCCTCGCCGTCGTCCTCGTTTCCGGCCGTTCGTTCCTGACACGCCGCGCGCCACGTCGGATGCGCGGGCCCCACACAAACCCAATAATTAGACCCCACAACCACAACAGCAGGGGCAGGTGTCCCCCGGACGCAACAGGTGTCAGTCCGGCGCGCCACAACCCCCATGTCGCACCCTGGCGCGTTCGCGTGCACGGCCTCGCGCGCGCGCGCACGCTGCGGCGCCGTCTCCGCTTGCGTGAAAGGCACCGGGGCGTGTACGTGGGGGCACGGAAGACGACACGGGAGGTTCGCCGTTCGCCCGCGTGTGTGGCGCCAACGCAGATTGCTGGTCAGTTCTTCCATGGCTGTCCACCTTGCCGAATTTCCCATCGTCGCGTCGTGTGCCCCCGTGATTTGTACCCTTGTGGCGCAGGGGGATACGGTCGGGTGGCACGTCCATTCCATTCTTGCCGTTCCGTCCCGTCCCGTCTCTCTCCCACTTTCAATTTCAATCGCCCTCTGTCACTGACAGCCACTTAAACCCGGATTTTAATCAACCCATCATTGATTCCGTGATCCGTCACAAACATCAGGGAGAGTATTCAAGATTACACTGAATTTACACATGTCAAACAACGATCAAATCGATGAGATTAACATGCCAAAGCTTTCTGCCTTTCTCGCTATTCATCGACACGTCACGCGTGCAGAACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTAAGGCACACATGATTACGTGTACAATCGCCTCTGAATTCCCGATGAATCTGACGAACACGAGAGCTTTGATCTGATCAATGTGTTTTAATTCGAGCAGGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAGCGGTTCCTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTGTAAGGGCGTACATCTTCCACTCCTAAATTTAGCTTCAGAAGTTAGGTATGGACTAGAGTTGTGAAGCTTCGTAAACCCAACTCCACCTCTCTATTTTATGAGAGTACTCTACTTAGCCCCACTCCTATTTTAGGTGAAGCTGAAACCATTTGACCGAGCTCCAGCTTCAGGAGATGTGGAGCTGTAACTGTGTCAAACTGATCCTAAGTAACACCAATGAGATCATGTTTCTTTTTGACTTTGAAGTCACAATGATTTTGTCATTGACACGTGGAGTCAGGATCTCATTGACCCACGTGTCACTGATAAAGTCACGTGACTTTGATCGTGGAGGATTTTGCGGTTTGGGTTTTCCTTTGACGATGGTGTGCGTGTGCGTGTGCGTGTGGGTGCAGATGGGACGAAGGGGATGATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCCGTCGATTTCTACAAGGTCTGATACTGCATCATGAATATGGATTAGAAACTGCTTGTGCTAGTTTTAAAAGAGGCTTTGAATTCTGGACTTGTTTGCGAAAACAATGCAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGTAATGCCTCGCTGCAGAAACCTCGTTAAGATTTCTGTTGCAATGCAAGATTGAATTCCAGCACTGCACATTGCTAAACTAATGATCATAATTCAAATCTGACTTGAAAAAAAAGATTGAAACGTGTTTGCTTGTGCAGGGCAATGGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015091