Os12g0630500

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0630500| Description = Similar to Thaumatin-like protein| Version = NM_001073869.2 GI:297613572 GeneID:4352858| Length = 962 bp| Definitio...")
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Gene Name

Os12g0630500

Description

Similar to Thaumatin-like protein

Version

NM_001073869.2 GI:297613572 GeneID:4352858

Length

962 bp

Definition

Oryza sativa Japonica Group Os12g0630500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27206573..27207534

Sequence Coding Region

27206715..27207491

Expression

GEO Profiles:Os12g0630500

Genome Context

<gbrowseImage1> name=NC_008405:27206573..27207534 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27206573..27207534 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccctccatctcgcgtcgacgacgtatcgacatcgctctcgtgtcgctgctgctgctcgccgccgccgccgccgccgtcgacgcggcgaccatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggcggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggccgccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccgctgcgccacgggcgactgcgccggcgcgctgtcctgcgccgtctccggcgagccgcccaccacgctggccgagtacacgctcggccgccccggcgccggcggcgacgacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagccggcgaacggcggtggcgcccggtgcagcaaggggcgcgggccgagctgcgccgtggacatcacggcgaggtgcctccccgagctccgtgtccccggcggctgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccggggacggttcgagcacgtgtgcccgccgacgagctactccatgttcttcaaggggctctgccccgacgcctacagctacgccaaggacgaccagaccagcaccttcacctgccccgctggcaccaactaccgcgtcgacttctgcccgccgacgagcggcgtgacggccggtgacgaggacgacgagatcgcctctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MEPSISRRRRIDIALVSLLLLAAAAAAVDAATITMVNRCSYTVW PGALPGGGARLDPGQSWSISVAAGTPAARIWPRTGCSFDGAGRGRCATGDCAGALSCA VSGEPPTTLAEYTLGRPGAGGDDFLDLSLIDGFNVPVSFQPANGGGARCSKGRGPSCA VDITARCLPELRVPGGCASACGKFGGDTYCCRGRFEHVCPPTSYSMFFKGLCPDAYSY AKDDQTSTFTCPAGTNYRVDFCPPTSGVTAGDEDDEIASA</aaseq>

Gene Sequence

<dnaseqindica>44..820#ctgtactacagcatcaatcaaattcaagctagtcacaacaataatggagccctccatctcgcgtcgacgacgtatcgacatcgctctcgtgtcgctgctgctgctcgccgccgccgccgccgccgtcgacgcggcgaccatcaccatggtgaaccgctgctcgtacacggtgtggccgggcgcgctcccgggcggcggcgcccggctcgacccggggcagtcgtggtcgatcagcgtcgccgccggcacaccggccgccaggatctggccgcgcaccggctgctccttcgacggcgccggccgcggccgctgcgccacgggcgactgcgccggcgcgctgtcctgcgccgtctccggcgagccgcccaccacgctggccgagtacacgctcggccgccccggcgccggcggcgacgacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagccggcgaacggcggtggcgcccggtgcagcaaggggcgcgggccgagctgcgccgtggacatcacggcgaggtgcctccccgagctccgtgtccccggcggctgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccggggacggttcgagcacgtgtgcccgccgacgagctactccatgttcttcaaggggctctgccccgacgcctacagctacgccaaggacgaccagaccagcaccttcacctgccccgctggcaccaactaccgcgtcgacttctgcccgccgacgagcggcgtgacggccggtgacgaggacgacgagatcgcctctgcttaattaattaattaagcttatcggcttaattaatttcgtgtgccttgatcgatcactactagtacaataattgacatggcaacgcatgcactcgatgatctctcttcgataatttggatgaataaaattccatcgaattcccttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0630500, RefSeq:Os12g0630500