Os12g0630700

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0630700| Description = Similar to NONA protein| Version = NM_001073871.1 GI:115489703 GeneID:4352860| Length = 4204 bp| Definition = Oryza...")
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Gene Name

Os12g0630700

Description

Similar to NONA protein

Version

NM_001073871.1 GI:115489703 GeneID:4352860

Length

4204 bp

Definition

Oryza sativa Japonica Group Os12g0630700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27223977..27228180

Sequence Coding Region

27224242..27224344,27224445..27224588,27224673..27224754,27224851..27225005,27225180..27225260
,27225712..27225773,27226281..27226349,27226527..27226575,27226799..27226862
,27227133..27227182,27227875..27228131

Expression

GEO Profiles:Os12g0630700

Genome Context

<gbrowseImage1> name=NC_008405:27223977..27228180 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27223977..27228180 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgctcgctgcctcccgctccgggcctcgccgccggaggtcgccaaggccttctcctcctccatccctgcctcctcctcctcctcctcctcctcttcctccaccaccaccgcggccgcctctctccctctccgcgccgccgttcccccgagctccggccgccgtatcccgccgctccggtgcgcctcctcctcctcgtcgtcgcagggctccgcgtcgccggatatcgccgtgctcctcgaagtggaaggagttcttgcagatgtgtatcgcttcggcaatcgccaagctttcaatgtagcatttcaaaatcttgggctggattgtgcaaattggacagagccaatatatgctgatttagtgaggaaagctagtggcgacgaggaaaggatgttgttattattcttcaacagaattgggtggcctacttctttgccaactaacgagaaagaatcatttatgaaaagtgttcttcgtgaaaagctgaaagctttggaagtgttctcagcttctgatagcttaccactgcggcctggagttgaacagttcattgatgatgcgcttaatgagggtgtgcctgtcgccatattgacaacatacgggagaaatggagagaaaacttcaagatatatcattgaaaaattaggccaagagagaacatcaaaaatacatattgttgggaaagaagaggttgaaagaagcttatatggacaacttgttcttggtgaaggagtagcctccagtttggatgaacagctagttaaggaagcacaaaaggctgcttctgcagaaaagcagaggatagcagaagaagttgcgtccattctgaaacttagtgttgatatcaatgcagcgtctaaaagctccgagaagattattgtcactctacgcgctggatccgagtatgttggacgggacgtgcaaaactgtgttcttgtcgcaggtagccaatctggcgttcttgcagctgagcgcattggtatgccatgcatagttgttagaagcagcctaaccgccagagctgagtttcactctgcgaaggccgtcatggatggatttggtggtactgacttgaccatatcgaaactattgagcaagaagtggtcttga</cdnaseq>

Protein Sequence

<aaseq>MAAARCLPLRASPPEVAKAFSSSIPASSSSSSSSSSTTTAAASL PLRAAVPPSSGRRIPPLRCASSSSSSQGSASPDIAVLLEVEGVLADVYRFGNRQAFNV AFQNLGLDCANWTEPIYADLVRKASGDEERMLLLFFNRIGWPTSLPTNEKESFMKSVL REKLKALEVFSASDSLPLRPGVEQFIDDALNEGVPVAILTTYGRNGEKTSRYIIEKLG QERTSKIHIVGKEEVERSLYGQLVLGEGVASSLDEQLVKEAQKAASAEKQRIAEEVAS ILKLSVDINAASKSSEKIIVTLRAGSEYVGRDVQNCVLVAGSQSGVLAAERIGMPCIV VRSSLTARAEFHSAKAVMDGFGGTDLTISKLLSKKWS</aaseq>

Gene Sequence

<dnaseqindica>3837..3939#3593..3736#3427..3508#3176..3330#2921..3001#2408..2469#1832..1900#1606..1654#1319..1382#999..1048#50..306#aatctgagctattattcgtgaagctcacgcgcaccttctcctctccgccatggccgccgctcgctgcctcccgctccgggcctcgccgccggaggtcgccaaggccttctcctcctccatccctgcctcctcctcctcctcctcctcctcttcctccaccaccaccgcggccgcctctctccctctccgcgccgccgttcccccgagctccggccgccgtatcccgccgctccggtgcgcctcctcctcctcgtcgtcgcagggctccgcgtcgccggatatcgccgtgctcctcgaagtggaagggtgagcgcctcagagaccacctggtcttcttgattcttggtcttgcgaccaagagagtgccctttaatttttttatatattccattttctagcttcaattgatgtagatagagctactatttgtcttattatattcatctggttacagaaaattaaaccacggtatagagatgcacagggtagttgtaattggctattgctctcttatcaatttcgaaatgcttcatgttctgtacttgtgttcttgagagaagtctcaatgttgttttcatgagcttggttcaattcagttggtgatgcgctcctggtatagttcagcaattcaagacggctacactgtctgtggaattctaataccgccttcgattagtcttgtaactttgtcaggaactcaggataaatgcgattgccttgtgatgtactactactagttactacttcctccatttcatattataagactttctagcattgcccacattcatatatatgttaatgaatctagacatatatgtgtgcctagattcattaacaactatatgaatgtgggtaatgctataaagtcttataacctgaaacggaggtagtagttgcttgggactttgttctatttttgtggcttgttctttctgatttttttttctctgaggactcttcatgattgtgtgatagaatttcctctgtttctccagagttcttgcagatgtgtatcgcttcggcaatcgccaagctttcaatgtaggtgcgaacaatgtaaatatgcttctttgcttaatgcaattccattccatatctgtgatcatttatctggtctatgcgatgccaatatacaagtgcaaagcattgaattatattgacaccattggcctgtgtaataaccaacatgtgttttctacagaataaaacttgtttggttttaacagaagaagtgtaacatatagtgctgcagataagtaattttgttgtctgtcttaatgcttctagcacaatttctaacatattttttcatcagcatttcaaaatcttgggctggattgtgcaaattggacagagccaatatatgctgatttagtgaggtgcatactatactctttagcttcatcaaaactgggacatgcgctcttttgaattgcactggatttactattggcatcaatgaatgttttcccctgctatttccagtctctattattttctatatagttctctttacaaagaatatattttggactttactgcatgaaaatctatcattctctttttgtttttttatttgtctgaagctatgtagttttttaggaaagctagtggcgacgaggaaaggatgttgttattattcttcaacagagtacgcctagctcttctcctagctgtcatatttgatccaataatactattgtttctgttctccttaaatcattcattgtgtaccacagtactattgcagagctgaataatttcatttgttgattgattgagatatgcatgcattacttattactatcctgtcctctgacttgcacagattgggtggcctacttctttgccaactaacgagaaagaatcatttatgaaaagtgttcttcgtgaaaaggtagatacatactttacgctatgcaggtacttaacaagaaaaaaccaccatactggcactaaaaaaaaatgaactttctattatgattacccataggcagactatcttgaattagggttgattgtatttagttaagaatctcaattctcatggctgtatagtctcaaaatatttctcatgatggaccatgcattgttctgctaatggaagataaatggcaatttgaattttggaacttaggcttttgcagggtttagcagtcagaaaaccatttgcatttgggtataccctgagaacaggattgcatattaaccatccaatgcactgacttttatgattggttctgttaatttctatttgtattttgcatttgatttcaatcaacttatgagttttcttctatcgggagtccagatcaaaatggttgatgggtgttttttcgtcttctttcctatagaccaaaaaatatccttctactgacttgtttacatgtgcttcttctcatagctgaaagctttggaagtgttctcagcttctgatagcttaccactgcggcctggagttgaacagtaagtctaccgttcccagtttatctaattttctatgaagtatctctctagtgaaataattccaggatcatttgggttattgttgattgatatatcacttttaggatcattataaatcatacttctaagatatgataaccatagtggtatgcaaggtagttcttttgaggggctttaccagaaatttatgtgagaatttgcattctgcaaagtatggcagacatggtaccataattcaaaagatccagtgtgttttttttatacccatgcatcttgctttatttccatcaatgcatgagcatttgtaagcaatatctttctgttctgtcgttgttttgatcttttgttcctttttttcttttctatgccatgagcttgctttatgaattactactatcttgaactttggaagttacattgtgtctgatcttgtgtattaaaccattcaaaggttcattgatgatgcgcttaatgagggtgtgcctgtcgccatattgacaacatacgggagaaatggagagaaaacttcaaggttgaatttgtatatttattgatttttttcccagtcaactcttgtggttcttctcaaaataaatagaaatgaaactttgcactttgggacatgcatgacactgtcaagataatctggacctgaatgacatgcgacagttttagtatattatgtgccttctacctttgagtgcagatatatcattgaaaaattaggccaagagagaacatcaaaaatacatattgttgggaaagaagaggttgaaagaagcttatatggacaacttgttcttggtgaaggagtagcctccagtttggatgaacagctagttaaggaagcacaaaaggctggttagtatttattactgactgcaacaattgaagccttgctcatgtattttaagtgtctgtaatgttaaaaattttcccctgcgtgctgtgttacagcttctgcagaaaagcagaggatagcagaagaagttgcgtccattctgaaacttagtgttgatatcaatgcagcgtctaaaaggttattattgtttgcttattcataggttttgtactttgatgagaaatatatctgaacttcacactgtttactttgcatcatcagctccgagaagattattgtcactctacgcgctggatccgagtatgttggacgggacgtgcaaaactgtgttcttgtcgcaggtagccaatctggcgttcttgcagctgagcgcattggtatgccatgcatagttgttagaagcaggtaaaagtcgatttcacatacaatttagtcatcattccactgccttaggccccaattttttggtgcttgtgtttatcttacctgtgcctgtccttcccagcctaaccgccagagctgagtttcactctgcgaaggccgtcatggatggatttggtggtactgacttgaccatatcgaaactattgagcaagaagtggtcttgacaactcggcactacattggagttgcctgctactagtttgaatttgtatgtaacccatggattgggtatatgttacaaccaaaatgaggcctctatgtagtacattgcagaaagaaaactatgagaagcacaagctacttcaggcatcattttttttttgggaacagaaaatgtactgaactcgctgtacttggacgaggcaattgaactcattgtctggtttggtctttgcataaaagtgagtaataagatggtgatttttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0630700, RefSeq:Os12g0630700