BGIOSGA015149

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Revision as of 04:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015149| Description = Putative uncharacterized proteincDNA| Definition = Oryza sativa Indica Group BGIOSGA015149, complete gene.| tag = H05...")
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Gene Name

BGIOSGA015149

Description

Putative uncharacterized proteincDNA

Definition

Oryza sativa Indica Group BGIOSGA015149, complete gene.

LocusTag

H0502B11.12

Ensembl Transcript ID

BGIOSGA015149-TA

Ensembl Protein ID

BGIOSGA015149-PA

Length

5623

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17899773..17905395

Sequence Coding Region

17905109..17905395,17904959..17905028,17904735..17904859,17904113..17904221,17903975..17904038
,17903639..17903694,17902680..17902787,17901976..17902125,17900186..17900356
,17899773..17900006

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17899773..17905395 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17899773..17905395 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATAAGGGTTGTGTCTCCGCCGCCTCCGTCCGCCGTGCAGCTGCGCGGCGGCGGCGGCACCCCGGGGCCCTCCTCCTCCTCCGCGGTCTGCCGTTTCTGGGGTTCCCGAAGAGGAAGTAGAGTTGCGGCGACGAGTAGTTGGGGTTGGGGGAAGAGTAGGAGGAGGAGGCGCGCCGCCATCTCATGCTGCTCTGCTGAGGAAGGGGAGGGGCCCCGGGTCGCCACGCCGTCGGCTCCCCCGGCGCCGTCCGAGGGATCGATACAGCTCTACTCGCAGATCGAGAGGGTGATCACGGAGGCGGCGAAGCAGTCCCGGGAGGGCTGGGGTTCGACCGGAGATTGGACCGAGATCGAGGGAGCGTGGGTGCTGAAGCCTAAATCACAGGAGCCCTCGTTCGTTGTTCACTTCGTTGGTGGGATTTTTGTTGGAGCTGCTCCTCAGATCACTTATCGTTTCTTCCTTGAACGACTTGCAGACAAGGGAGCTTTGGTGATCGCAACGCCATATGCTAGCGGCTTTGATCATTTCTTCATCGCAGATGAAGTTCAATTTAAGTTTGACAGGTGCTTAAGAAACATGGTTGAACCTGTAAATGACCTTCCCACATTTGGTGTTGGGCATTCTTTGGGATCTGTGATCCACCTTCTCATTGGATCAAGATACGCTGTGCAGCGAAGTGGAAATATATTGATGGCCTTTAACAATAAGGAAGCAAGCTTGGCAGTTCCATTATTTTCGCCTGTAATTGTTCCCATGGCACAGAGTTTTGGGCCAATATTTTCCCAGTTGACATCATATCCAACACTTCGTTTTGGGGCGGAAGCAGCCATTAAGCAACTTGAGAATCTTAGCCCTCCTGTTGTTAAGCAGCTCCTGCCATTAGTTCAGCAACTTCCTCCACTGTATATGGATTTAGTAAAAGGCCGAGAAGAATTCGTTCCAAAGCCAGAAGAGACACGTCGGCTGGTAAAATCCTACTATGGGATTTCTCGAAACCTCTTGATAAAGTTCAAAGATGATCAAATTGATGAAACATCTATTCTTGCGCAAGTACTAAGCTCCGAATCTGCCATTAGCTCACTGCTTGACATGTCAATTCGGTCACTTCCTGGAGATCATGGACTACCGTTACAGCAGGTACTTCCTGATGTTCCACCAGCAATGGCCGATGCAGTAAACAGAGGAAGTGAACTCCTGACAAATCTAGCAACAGGGACACCATGGGAGGCTGTTGCTAAGGAGGTAGGTAGCACTTTAGGTGCGGATTCGGGCGTTCTACGAGCACAAATCTCAAAGGATGTCAATACACTTGTTGACGTAATTGTTTCATGGATTGAGTCAAATTCTGGTCCAAGATTACTTCGTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MIRVVSPPPPSAVQLRGGGGTPGPSSSSAVCRFWGSRRGSRVAATSSWGWGKSRRRRRAAISCCSAEEGEGPRVATPSAPPAPSEGSIQLYSQIERVITEAAKQSREGWGSTGDWTEIEGAWVLKPKSQEPSFVVHFVGGIFVGAAPQITYRFFLERLADKGALVIATPYASGFDHFFIADEVQFKFDRCLRNMVEPVNDLPTFGVGHSLGSVIHLLIGSRYAVQRSGNILMAFNNKEASLAVPLFSPVIVPMAQSFGPIFSQLTSYPTLRFGAEAAIKQLENLSPPVVKQLLPLVQQLPPLYMDLVKGREEFVPKPEETRRLVKSYYGISRNLLIKFKDDQIDETSILAQVLSSESAISSLLDMSIRSLPGDHGLPLQQVLPDVPPAMADAVNRGSELLTNLATGTPWEAVAKEVGSTLGADSGVLRAQISKDVNTLVDVIVSWIESNSGPRLLRS</aaseq>

Gene Sequence

<dnaseqindica>1..287#368..437#537..661#1175..1283#1358..1421#1702..1757#2609..2716#3271..3420#5040..5210#5390..5623#ATGATAAGGGTTGTGTCTCCGCCGCCTCCGTCCGCCGTGCAGCTGCGCGGCGGCGGCGGCACCCCGGGGCCCTCCTCCTCCTCCGCGGTCTGCCGTTTCTGGGGTTCCCGAAGAGGAAGTAGAGTTGCGGCGACGAGTAGTTGGGGTTGGGGGAAGAGTAGGAGGAGGAGGCGCGCCGCCATCTCATGCTGCTCTGCTGAGGAAGGGGAGGGGCCCCGGGTCGCCACGCCGTCGGCTCCCCCGGCGCCGTCCGAGGGATCGATACAGCTCTACTCGCAGATCGAGAGGTAGGCGATGGCTAATTCCGTGCCTGCGAAATCTCTCTCCTAGATTGATAACATCTTTTGTTGTTGCGGCCGGCGAACAGGGTGATCACGGAGGCGGCGAAGCAGTCCCGGGAGGGCTGGGGTTCGACCGGAGATTGGACCGAGATCGAGGTGCGCTTCGGTGATTGCGACCTCAATTGAGAGTGCAAAATTTTCCTGCTACTGTTGTTGATGCAGAGTGATTTTACTTACTACTGGTTGTTCTGATAGGGAGCGTGGGTGCTGAAGCCTAAATCACAGGAGCCCTCGTTCGTTGTTCACTTCGTTGGTGGGATTTTTGTTGGAGCTGCTCCTCAGATCACTTATCGTTTCTTCCTTGAACGACTTGCAGACAAGTATGTGGACAAGCAATGCCCAATGACCCAAAATTATCTGTGTGTAACAGTCTAATTCTGCTCAAAGACTGAAACAGAGCGGCATTTGATTTGTTCGTAACGCTGGAGAGTTGACTATAGTTCTATACCCGAAATGCAACCTTTGAAAATTTAGCCCTCCCTTTGTTGTGTGTTTAACTAGTGCATCATTGCTTGACCATGAATCTAGAGAATAAGAGCTTTGGTGTGTAATTTGTCATTATTAACTGCAAGGCACCTCTTTATGTGGTTCTAAGCAAGACACGCATGTTCAATCTATCAAAAAGTTAGTGAAACAACAATCATTTTTAAAGTTTGTCCTTTGATAATATTACAAGCAATGAACTGCATCTTCATTTCAAGAAAATGATACAGTACTTCTTAGCTCTAGCTCTACACGGTTTACACTGCTATTATGATTTCCTATAGAGCTATCTTTCTACATATTCCACTTCTCTAGCAGACATATATTTTATCAGTCTATTTGAAATTTAGGGGAGCTTTGGTGATCGCAACGCCATATGCTAGCGGCTTTGATCATTTCTTCATCGCAGATGAAGTTCAATTTAAGTTTGACAGGTGCTTAAGAAACATGGTTGAACCTGTAAGTTGTTATTTTTCACATAACAATTAACTCCAATATTGTCCAATATACTAAGCAAACATTTTTTTTTCCAGGTAAATGACCTTCCCACATTTGGTGTTGGGCATTCTTTGGGATCTGTGATCCACCTTCTCATTGGTACGAGATTATAAGTGCATATTTCGGCCTTGTTTAGTTCCAAATTTTTTCTTCAAACTTCCAACTTTTCCATCACATCAAAACTTTCCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTCCAATTTCAACCAAACTTCCAATTTTAGCGTAAACTAAACACACCCTTCATTTATCTTCTGGGCTATGAAGTATTCTTTATGTAAGATTAAATTTGTGCTTGTTCAGTTAGCGGTGTAATATGTTGTTTTATCACTGATGTTTGCTTCTATTAGGATCAAGATACGCTGTGCAGCGAAGTGGAAATATATTGATGGCCTTTAACAATAAGGTATGTTTTTTGCGTGTTATCTCCCCTCCTTGTTAACACTAGTAACAATCCCATGCTTTGCGATGGGCTTATTTAATTGAGGATATATCCATACCATTAGGATGGATGGGACCGTGGATCGAGTAAAGCACCGGAAGACTAACTGCTTGTTCTTTTTCCCCCTGGTTTTTCCTTCTTTTTTTTCTTCTTTTTAGGAGGCAGAGATTACATTTCCTGGTTTTTGGGACAGATATGGGGAGGACAGAGTTGTTTTTTCGTTAACTAATCGTCTTTTCTTTTCCTGGTTTTCTTCTTTTTTTTCTCAGTTGGTTAGTTTTTGGCACTTTTTTTTCTCTTTTTTTAGCGCTTTTTATACGTGAGATTGGAAGGGGAGGAAGGAGGACGACTGTCCTTTCGAAGTAGTAGAGAAAATTGCATGGCTTAGGGAAGACACATACATATAGGTAAAGACCATACTAGTACACTGTAGATGACCAGGGATCCATACTTTATTGCTTTAGTTTGTATCTCTTGATAAGATAAGTGGATAACTGGACATTCCTCATTGAGTAGATATTTAAATTGGGTAATCCATAGTAATGCAACTTTCAAAGTGAAGTAAGAACTTTTGTACGCTTCAATCTACATGGAGCGGGTACATCAGCTGTGAAGCATGTGATGCGGCTCTGTTAGTTTGGTACAAAAATCGTAGTGTCATAAGACACTTGCATTTAGATGTTAGGACGGAATGATGTTATCTATTGTAACCAGAGCGAAAAGAATTTTTGTTCCGTTCAAGCTATTAATTCTTTTAAAAGCTACTAGTAGAATATTACTTGTAGTTTTTCTTCTTCTTTCTTTTTCTTTTGCAGGAAGCAAGCTTGGCAGTTCCATTATTTTCGCCTGTAATTGTTCCCATGGCACAGAGTTTTGGGCCAATATTTTCCCAGTTGACATCATATCCAACACTTCGTTTTGGGGTACGATGTGTTTCTGAATTCCATTGCCAACTTGTTACGATGATTTTTTATATTTTATGACAAAGTCTGTTGCTTGAATGGTCTGCAACTGTTCCACATGGTGGTATTATTTTCTTTTCATTCCTGCACTGTCATTCTCATTTGGACATCTCCTGTTTCTGGAGACGTACTATCTTTCTTAGTATGTATCACAAGTGGAACTTATGGTGTTAGGTGTAGGTGTAAGTGACAAAGTCAGTATCTGTTCACTATTCTAAAAATAGGAAGTTCCCAACTCTAATAGAATGTTCGAGTTTTATGTTGGCGAGCCTCCCTTCAATTTTAAACTCAGTAAGCACATAAATTTACCAGAAGTTTCATGTTAGTTACAAAGAATTTTTCCTCAGATAGCAATAATATGAAATAGAAATGGACATGGATCATTCCAACTATTACACTTGAATATTGCTACTGATGCCATGTCACTCTCCCAAATACAAATCACATGTTTCCTATGTGTTGATTATATGCCACTTCCCTCTTAAGCTAAGATGATTATAATCCTTGCAAAACAGGCGGAAGCAGCCATTAAGCAACTTGAGAATCTTAGCCCTCCTGTTGTTAAGCAGCTCCTGCCATTAGTTCAGCAACTTCCTCCACTGTATATGGATTTAGTAAAAGGCCGAGAAGAATTCGTTCCAAAGCCAGAAGAGACACGTCGGCTGGTAAGTTAGCTTATTCTTCTCTTTCAATGCTTCAGATGCTTGCATAGGATATATGTTAACCTTTCATCTACAATTGCTGTGCTGCTGTTGTAATATTATATAGAAGTGCTAAAAAGTCAACTCTAAAACGATGTTTTTTTTTCTTCTATACTTTCTATTTTAAACTAACCAATACTAACCACTGGGTTAATAAATTTGAATAGCCTCTGATATCATATGACATAGGATGCATCCCCAACTCCCCATCAATATCATTTATTGGTGACTAGCAGAATCTTCTATGCAATTCATCACATTGCACTTTTTGAAAGGATCATCAGGCAATGGATCATGGTGGATTCCCCTTGCTTATTTTGAGGATATAGGCAGAGATGTGCCCAAATAGAAGTATACAAACCAAATGAAATCACTAATTCTCCAGAGCTGTTAAAGTATTTTCACCATCAGTTCTATACTAAGGGTGTGTTCGGGTGTGCAGGATGGAAACCCATCCTGCACGTAAAACGGAGCGGCCTTTTAACACGTGATTAATTAAGTATTAGTTAATTTTTTTTTTTCAAAATGGATCAATATGAATTTTTAAAACAACTTTTGTATATAAAATTTTTGAAAAAAATGCACCGTTTAGTAGTTTGAAAGGCGTGCGCGCGGAAAACGAGAGAGGTGGGTTGGGAAAATGGTGTACCGAACTCAGCCTAACATCAGTTAGCATTTTGAGTTGAATTTTCTCGGTTCAATCCAAGTCTACAGATGTCATTTTTGGCGTGATTGATGAGTATAGAAATAACCAATAATTTGGGTAGTATGTACATATGTATGAAATGTTCAGTTTGAAGTCTACAACAAACTTTAAGGAAACAAGGAATTACGATGGCAGAGTTATTATATTTTGATCTATATATGAGTTTGTTTTAACAAAAAGGAAGACGTGTTGAATATATCAAAGCTCTTACTGGTGTTACCATAATCTAAAATTGACCTGACAGATTAGTATGATAGTGAAATGCTTGCAAAGACCATTTGCTGTGTCCACTCTATAATTCACACTGCTGATCTTACAGCATTATTTCGCCCATCTTAATCAACCCTCGCAGCATGTGGCTCTCTTTAGGTTTGGACGATCATGAAAATATGCAATTCATTCAGTGCGCAAAGATGTATGCAGGATAAGCTAAATAACTAGAGAACTGTCCAGCAATCAAAGAAATGTTAGCACCTTTTGTTTGTGCATTTGTGGATGAGTAGGTTGGAATATTATTCCCTGTTCTGACTCTTGTATGATGTATGCCCAAACATAAAACAAGTTAAAAGGAGATATCCTTAATGTTACTGGGACAAAGTGAGTAATCTGCATTACCATGCTGCTTCAGACTTGGGAGGAGAAAAGAAAAACAGAGAGAGAAAGAGCTAACTAATCCATCACGTTTAATGTAGTTGGATTTCTTGTTTGTATGTGATACTAAAAATAAAAAAAGATGTAACTTATGTTATAAATGGCAGCAAATTTATTATCATGAAGCATTTTTCAAATTATTGTGTTGTGGTTTTTTTTTTAAAAAAAATACCACTATATAATTTATTTTTATGATTGTTCTAATGCATTACACTTCTTTCTGCAGGTAAAATCCTACTATGGGATTTCTCGAAACCTCTTGATAAAGTTCAAAGATGATCAAATTGATGAAACATCTATTCTTGCGCAAGTACTAAGCTCCGAATCTGCCATTAGCTCACTGCTTGACATGTCAATTCGGTCACTTCCTGGAGATCATGGACTACCGTTACAGCAGGTGATTTTCGCTGAATATATTCTCAGAATTAAAGGTGCTGACAAATGACAAAGCCTGTCATGTACAGCACGTGCTGTCCATGAATAAAGCTATTGTTAGACTAAAGATATTATTTTTTGAGAAAGTTATTGTATCCGTCTCTCTTATTTCAGCTAAGTAATCACATATTTTTCCTTCAGGTACTTCCTGATGTTCCACCAGCAATGGCCGATGCAGTAAACAGAGGAAGTGAACTCCTGACAAATCTAGCAACAGGGACACCATGGGAGGCTGTTGCTAAGGAGGTAGGTAGCACTTTAGGTGCGGATTCGGGCGTTCTACGAGCACAAATCTCAAAGGATGTCAATACACTTGTTGACGTAATTGTTTCATGGATTGAGTCAAATTCTGGTCCAAGATTACTTCGTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015149

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015149&oldid=64043"