BGIOSGA015166

From RiceWiki
Revision as of 04:09, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015166| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015166, complete gene.| tag = OsI_157...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015166

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015166, complete gene.

LocusTag

OsI_15746

Ensembl Transcript ID

BGIOSGA015166-TA

Ensembl Protein ID

BGIOSGA015166-PA

Length

3115

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17635890..17639004

Sequence Coding Region

17638560..17639004,17638085..17638265,17637759..17637998,17637544..17637688,17637079..17637145
,17636919..17636996,17636393..17636445,17636293..17636329,17635890..17635900

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17635890..17639004 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17635890..17639004 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCACCGACATCGCCGGCGACGGCGAACCCAGCTCGCCCCCGCCCCTGCCCGTCCCGGACGGGCTGGACGACAACGGCTTCCCCCTCCCCTCCTCTCCCACTGCCGCCACCGCCGCCACCAGCTTCGCCGACGACTTCTACCGTAGCGGCACCGACTGGTCCTCCCTGCTCGCCGCCCCCTCGCCGCCGCCGTCGTCCGAGGAGTCCGGGAAGAACAAGTCCGGCGACTCCCTCGTCCAGAGGAGCCTCTTCCAGGCGTGGGGAATCGACAGGCGGCCGCGGCGGGAGGAGGAGGTCGCGGGGGTCGCGGGCGGGGCTGGGGCTGGGGCTTCGTCCGCTCCTTCTGGCTCATGGCCCGGGAGGAAGCGGCGGCGAGGAGGCGAGGTGGAGGCCGCGGCGGACAGGAAGCCTCTCGCCTGCCCCTTCTACAAGAAGATTCCCGGAACTCCATTCACGGTGGATGCATTTCGGTATGGAGCGGTTGAGGGTTGCAATGCCTATTTCCTCAGCCATTTTCACCATGATCATTATGGTGGATTAACCAAGAAATGGTGCCATGGTCCTATCTACTGTACTGCCCTAACTGCTCGCTTGGTTAAGATGTGCTTGTCAGTAAATCCCGAGTATATTTGTCCGTTGGAGCTTGATAAGGAGTATGTTATAGAGGGAGTTTCAGTGACCTTGTTAGAGGCCAACCATTGTCCTGGTGCAGCACTAATTCACTTCCGTCTTGGTGATGGGAAGAAATATCTCCATACTGGGGATTTTAGAGCATCAAAATCAATGCAGTTGTATCCACTTCTCCAAAGAGGCCAGATAAATTTGCTTTACCTGGACACAACTTATTGTAATCCAAAATACAAGTTCCCTCCCAAGGAAGATGTTATTGATTTTGCTGTGAGGACAGCTAAAAGATATCTACAGAAGGAACCAAAAACACTCATTGTTGTTGGAGCATATAGCATTGGGAAAGAAAATGTATATCTAGCGATTTCGAAAGCTTTACAGAACTTGCAGAAGTATTTGGAGACTCTTAAACAAAGATTTCTAGCTGTGCTGGCTTTTCGACCAACAGGTTGGACTTTCTCTGAGGAAACTGGAAATCAGCTTGACCTAATTAAACCTAGCTCCAGGGGCAAAATTACTATCTATGGTGTTCCTTATAGCGAGCACTCAAGTTTCAGTGAGCTTAGAGAATTTGTGATGGTCTATATTTGTTTGCTAGTTTCTGAGACCCCAAAAGTGAAAGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGTDIAGDGEPSSPPPLPVPDGLDDNGFPLPSSPTAATAATSFADDFYRSGTDWSSLLAAPSPPPSSEESGKNKSGDSLVQRSLFQAWGIDRRPRREEEVAGVAGGAGAGASSAPSGSWPGRKRRRGGEVEAAADRKPLACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDFAVRTAKRYLQKEPKTLIVVGAYSIGKENVYLAISKALQNLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQLDLIKPSSRGKITIYGVPYSEHSSFSELREFVMVYICLLVSETPKVKE</aaseq>

Gene Sequence

<dnaseqindica>1..445#740..920#1007..1246#1317..1461#1860..1926#2009..2086#2560..2612#2676..2712#3105..3115#ATGGGCACCGACATCGCCGGCGACGGCGAACCCAGCTCGCCCCCGCCCCTGCCCGTCCCGGACGGGCTGGACGACAACGGCTTCCCCCTCCCCTCCTCTCCCACTGCCGCCACCGCCGCCACCAGCTTCGCCGACGACTTCTACCGTAGCGGCACCGACTGGTCCTCCCTGCTCGCCGCCCCCTCGCCGCCGCCGTCGTCCGAGGAGTCCGGGAAGAACAAGTCCGGCGACTCCCTCGTCCAGAGGAGCCTCTTCCAGGCGTGGGGAATCGACAGGCGGCCGCGGCGGGAGGAGGAGGTCGCGGGGGTCGCGGGCGGGGCTGGGGCTGGGGCTTCGTCCGCTCCTTCTGGCTCATGGCCCGGGAGGAAGCGGCGGCGAGGAGGCGAGGTGGAGGCCGCGGCGGACAGGAAGCCTCTCGCCTGCCCCTTCTACAAGAAGATTCCCGGTAAATGCTGGTCTTTTCCAATCCTGTTGTTTTAATTGGCGTGTCTATCTATAAATGTTCCTGAATTCTGTCAAGCAATTTCTGTACCGATGTTCTAGCAACTAGTTTGTGGGAGCCTGCATTTGTGAATTTGATATCATTATTCGTTTCTTGGTGCAAATGAGGTTGTTACATGTTGAATAAGAATCTGAATTATCGCAAAAGAAAATTGGAATCTGAATGTAGTTGTTATAGTACTATATTTAAATTCCTCGCGGCCTTCAGTTGTCTTAAAACTGAAATTAACGAACATAGGAACTCCATTCACGGTGGATGCATTTCGGTATGGAGCGGTTGAGGGTTGCAATGCCTATTTCCTCAGCCATTTTCACCATGATCATTATGGTGGATTAACCAAGAAATGGTGCCATGGTCCTATCTACTGTACTGCCCTAACTGCTCGCTTGGTTAAGATGTGCTTGTCAGTAAATCCCGAGTAAGTCCTTTTTGGGGGTGTACAACCATCCTCTGATCTGTTAGTGCTAGTATAATGTGTTCAAACTGATAGATTGATGTTTGCAGGTATATTTGTCCGTTGGAGCTTGATAAGGAGTATGTTATAGAGGGAGTTTCAGTGACCTTGTTAGAGGCCAACCATTGTCCTGGTGCAGCACTAATTCACTTCCGTCTTGGTGATGGGAAGAAATATCTCCATACTGGGGATTTTAGAGCATCAAAATCAATGCAGTTGTATCCACTTCTCCAAAGAGGCCAGATAAATTTGCTTTACCTGGACACAACTTATTGTAATCCAAAATACAAGTGCGTATGCAGCCTTAAGTTTAAGCATTTTCTCATTAATGGTTGTGTTGCTAAACCTCATATTCTTTAGGTTCCCTCCCAAGGAAGATGTTATTGATTTTGCTGTGAGGACAGCTAAAAGATATCTACAGAAGGAACCAAAAACACTCATTGTTGTTGGAGCATATAGCATTGGGAAAGAAAATGTATATCTAGCGATTTCGAAAGCTTTACAGGTACTACAGATCTGAGACTTCAGTATGAATTTTTGGAATGAAGTCTTACGAGTTCTTAAAAGAAAAAAAAAATCCCTAGTAGGCTCTTTCTTAACAATGTTTCACCTAATGTTGTGCTATGCAATGTGGCCATGTTGGTCTTCTAATTTCCATTCGCAGATAACTCACTTATGTTTATTCTTGAAAGGTTCCTATCTACACTGATGCATCAAGAAGGCGCATTCTTCATGCATTTGGCTGGTCGGATTTATCCAAAATGATATGTTCAGACAGTCAAAGTTCATCACTTCATGTTCTGCCCCTTTCTTCTTTACGACATGAGGTTTGGAAATGATTTTCAAATGAACCCATGGAATTTGTCTAGTAACCTCTCTTACCAGAAAGCTGTTTCCTATTAGAACTTGCAGAAGTATTTGGAGACTCTTAAACAAAGATTTCTAGCTGTGCTGGCTTTTCGACCAACAGGTTTATAATCTTGGGAAGATAAAATTCGTGCTACCGAATTCTTGATTACATCATTCTTAGTTTCCATTCAATTGTTTATCAGGTTGGACTTTCTCTGAGGAAACTGGAAATCAGCTTGACCTAATTAAACCTAGCTCCAGGGGCAAAATTACTATCTATGGTAGGATTTGTTAGATTGTGGCATTGTGCAGATAATTCTTTTCTTTTATTACTTTCTTAATGAAAGGCTGATGGCTACCTAAGTTGTTCAGTAAAAATATTTCTTTCTGCTCACCATGGATTTAGTTTCTGGCAATTGCAAACTTCAATTATTTATTTGCTGAATTCAAAATCTTATTATTCATGCGTATGCAGGTTTTCCTTTTCTACTTGGATAATAATTAATGTCTTTGTAATATGATCTGTGTACCCTACTAGAGCTTGTGGATTGCAGCCAAAGCTGAAACCCACAAGTGTGTCCTGCATTAGAACTTCCTCATACTGGGCATGTTGTTTCAGATGCATATTCTAGCTGCAACCTAGTTAGTTTTGTATCATATGTGCTAGACAAACATTATCTTTCAGCAATTTCAAATTTATAAAGTAATTTGCTCTGATTCCATGTTTCATTAAACTAATTTGTTATCCTTGTAGGTGTTCCTTATAGCGAGCACTCAAGTTTCAGTGAGCTTAGAGAATTTGTGATGGTAAATTGCCAGATATGATCATGCATTTTTGTAATCTTTTACTTTGATACCTTATAATTATAGGTCTATATTTGTTTGCTAGTTTCTGAGACCCCAAAAGGTAATTCCCACTGTTAATGTTGGGAACGCGGCAAGTCGAGACAAAATGCAAGCACATTTTCGGGAATGGCTGAAGGGCTTGTGAGAGATGAAGCCTAATCACTTTATCCATGTCAACCTTAGCTGTTGGATATTCAGTGGTACGGTTATATAACCTTCCTGCCATCATAAATGCACATTTCACTAAAATGCTTGTCTTCATTCTTCACTTCTTTTTTTTTCTATTATAACAAATGCCAGTGACACGATGATTGTGCCTCCAGTCCCGAAGTCTGAAGAGCAGCCAAGATCTTAAGTGAAGGTGAAGATCGGTATACTCTGTTCTGATGCTGAAAGTTAGCAATTTCCAAAGTTGTACTGGTTGTTAAAACTCTGTTGTACATATCTCTTCAGTGAAAGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015166