Os12g0631200

From RiceWiki
Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0631200| Description = Zinc finger, RING-type domain containing protein| Version = NM_001073873.2 GI:297613577 GeneID:4352863| Length = 467...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0631200

Description

Zinc finger, RING-type domain containing protein

Version

NM_001073873.2 GI:297613577 GeneID:4352863

Length

4672 bp

Definition

Oryza sativa Japonica Group Os12g0631200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27251767..27256438

Sequence Coding Region

27252109..27252493,27253333..27254081,27254748..27255146

Expression

GEO Profiles:Os12g0631200

Genome Context

<gbrowseImage1> name=NC_008405:27251767..27256438 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27251767..27256438 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagaggttagccgacgtggagggcagtttcgcctgcaattcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacaccgaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctgttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtggtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctatgtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcagaatgggatacggaagatctttgctttcaccaattcggagaagctgtactttcagatcgcagaagctgaaattctagaagaccagctcttggtagctttaggacacagaattcttgaactggtggaaaagctggaagactttgatataatattgcttcctagctttgagcttgagaggccactgcagttggccaaagaagccataggcatcatgtatctatctccatacgaggttggcacctgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggttgtgctcatacattttgctatagctgcttgacttcatatactcaagagaagctgcaaaccaacaaggttcctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtcattccttccagttagctgctacgattctctggagagagcttttgcagaagctggcacctcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagtcagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgcccagaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgtgatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcggctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcacacaaggctgcttccatatgaattgctggtgcgggcacgagttctgctactcctgtggcgccgagtacaccaatggtatacagacatgccaatgtgttttctgggacgaagagagcatcgaggctgcctcggcagcgcattccacccaagcatccgagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggagcaggagagagctcagctggctctcattcagaggttcctctcagggggtttcaacctgggtgagcctccaagccagtcgccgccccgctgcgccgattcatatatcattgacaccatgaaggaccttcaccagctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacatccagtga</cdnaseq>

Protein Sequence

<aaseq>MEERLADVEGSFACNSRGEDDFRSCCGDEDEWEDTEESFTAGVA KGELDESSVRLFFKGVSSPEAEGKKLSGIGVVMERSPGVPMLQVQKKLDFYVDELVAD HLALMDGLLVALQNGIRKIFAFTNSEKLYFQIAEAEILEDQLLVALGHRILELVEKLE DFDIILLPSFELERPLQLAKEAIGIMYLSPYEVGTCSICCEEKRGAQMIKVGCAHTFC YSCLTSYTQEKLQTNKVPIRCPQLRCKYHISASECKSFLPVSCYDSLERAFAEAGTSD MERFYCPFPNCSVLLDLSQHFSRASTSSQSDLNCVECPECHRDICINCGVPWHVMMGC DEYQSLPVDERDAGDLSLHRLAQNNRWRRCQRCRRMIELTQGCFHMNCWCGHEFCYSC GAEYTNGIQTCQCVFWDEESIEAASAAHSTQASEIWAWDTFDCMPTAIEGYSEQERAQ LALIQRFLSGGFNLGEPPSQSPPRCADSYIIDTMKDLHQLPWLERFVSVISDSYNEDY IQ</aaseq>

Gene Sequence

<dnaseqindica>3946..4330#2358..3106#1293..1691#agtgctgctcctgctcctcgtggtcgagaaggaataattagggctcctctgtctttgctttaacgccactcctctctctttttcttcttcttcttcctcagaataaattctctctccactgccgcaaggaaaggcgcctcaccgtcaccggggtgtgccggaaagctcccatctttgtctccatttgttgcttgccctcaattccttccttctttcctccctctgggttcttgtccccggaggcccggtttcatctctcctcgatgtgatgcgtgtgactcccaggtgctcccgcttttctctctttctgacccacactcgctcttgcttcgattgggcgcatctcggtctgtgtggagtgtgttcttgttcttcatctttttttttttctgcgaattttgttgggttctttttgtgcttgttgggcggagttttctcttgctgttttctagtaatttttcttgagctggaatatctacttttgggcctaaatgctcgccttctctagatctgtttctacgagttttctgcagaatttgctgttagattcgattgcgaggcaggttgcctcggtattttcttccttttttttcttgggcctttccaacatttgagctagatttttttttcttttgtcaatttcaggagcagtcgtttcgttctcgcaattgctgattttgatctgaattgttggtaaattctcaccttgcaggcaggtgattggagctcacgtcgcggcggtgatttgcactgtcctcggggtctgaattgctaattactactgagcgtctctctcgcatgaggaataattcgagaatcgacgaaagctccaacatttgggtgaatttggtcgctgccccgttcaatttcgcgcctcgcggccctggaattcgcgatgtggagctccttctggtgcttcatggccatcctctccgccaatttctgagccaaatctcgtgcgattccgaggcccccccacgaatctgtggggtcgtcggagcgataggtcactggcaccatcaccaccaccaccatagtggttgtggcaaaaaggaacaaggcaccttcttggagttgggattaggtgcagtctcgagctcaaaagggctcgtttggtggaaacctttttggttttggttgcctgtcagtgtgctcagcttcttgctgacccatctagctgaatggagattgctcaaattggggattgctcagctttctaactgagtcagagagtgtcgtcttgatttgatttgatttgattggatttcaccaattggattgggatttcagcaatggaggagaggttagccgacgtggagggcagtttcgcctgcaattcgagaggggaggatgacttcaggagctgctgtggggatgaggatgagtgggaggacaccgaggagtcattcacggccggcgtcgccaagggagagcttgatgagagctcggtgaggctgttcttcaagggcgtgtcgagccccgaggcggaggggaagaagctgtccgggattggggtggtgatggagaggtcacctggggtgcctatgcttcaggtgcagaagaaactggacttctatgtggatgagctagtggccgatcacttggcgctgatggatggcctgttggtggcgttgcagaatgggatacggaagatctttgctttcaccaattcggagaagctgtactttcaggcaagagtttccgattttctctaatatatggtttgcccttatgaatgttacacagaatcgctagtatcgctttcaatcaccctgatatttctgctattgggcatcacctaatgggcgcttaaggtttagttaactaaactgtatgttgcagtttggcattgtgatatacgctaccaaaataatgtaattcatgttttgaggataccacatgtttggctggtaatccgaatgacaaaaaaatggaccgcaccacgataactatacttgacttcatgccatcttgcttggttccaagttagtcgaactaatcaattcaacaatcagtcaatgaagaaaccgtctttcctatttgagattttaacagctacctattaatagctgactgttgtaaacagaactaaactgagaggaacgaaaggatgaaaaggtagggaatgtgcagttatgacagctgcacattccaaattctgctactgcagtgcagctgcagtatatagatcgtattcatcacttgcagttctatgcagtagtttgttcaatttatgttgtccgaaagctgtagaattcttacataattacctatttcaatagagttatcttactgccttcctgtattatatcatacttagacatgatgtgtcatttcttgttcttttgcactgacagatcgcagaagctgaaattctagaagaccagctcttggtagctttaggacacagaattcttgaactggtggaaaagctggaagactttgatataatattgcttcctagctttgagcttgagaggccactgcagttggccaaagaagccataggcatcatgtatctatctccatacgaggttggcacctgttcaatttgctgtgaggaaaaacgaggcgctcagatgatcaaagtgggttgtgctcatacattttgctatagctgcttgacttcatatactcaagagaagctgcaaaccaacaaggttcctataagatgcccacagttaaggtgtaaatatcatatttctgctagtgagtgtaagtcattccttccagttagctgctacgattctctggagagagcttttgcagaagctggcacctcagacatggaaagattttattgtccctttccaaactgttcagttctactagatcttagtcagcacttctctagagcaagtacatcaagtcagtcagatctcaattgtgttgagtgcccagaatgccatagagatatctgtatcaactgtggagtgccatggcatgtcatgatgggctgtgatgagtaccagagcttgcctgttgatgaaagagatgcaggagacctgtctttgcatcggctagcacaaaacaataggtggaggcgttgtcagagatgccgacgaatgattgaactcacacaaggctgcttccatatgaattgctggtatgttccttttttcagtttggcacacttgctggtatggaatctcgtagactaaaaagaggaatttcttttttaaaaaaataaacaagtacacacagaactaagctttataattctacatagagaagcactctttttggccggtttcattgggcttcaactgaaacttgaaagcattaaacactgtttattataagagtaaagatctgttgtcatgctagtagttaaaatttctaaatgagagagaagaatcatttcacattttcacaggttatgaacgaatgtttattatgtttgatgaagctttcttagtgcaacttttaagtagtgcgctgatttctgcctctcccacaatctgtaatatttgaaagttaccaaacagatagaaatgttgtagactgtaagctagctatattatgttggcccactctgtctctgaccacactctgaattaaagaacttggtagttttcagtacaaattccaaggtgttccttattatggcctcagaatcccggattcccaaattagttatttaatttatcatatcatacaagagataacttcatataattcttagttggggcctaaggtgcattactggtgtcaataagagaattttcttctacagtccgcattagggttttgtttatatgggcatactcttcatagtaatttcacactaggtagattcagatccaactagatgtgctctgtgttgctcgcccacctagatagctattgcattgcaaatgctcgctcccatcaaggattactaattcatgaatgcaccttttgattcttatcgatatgctaaatgttggtttgtcacttctgaaggtgcgggcacgagttctgctactcctgtggcgccgagtacaccaatggtatacagacatgccaatgtgttttctgggacgaagagagcatcgaggctgcctcggcagcgcattccacccaagcatccgagatatgggcatgggacacgttcgactgcatgccaaccgccatcgaagggtactcggagcaggagagagctcagctggctctcattcagaggttcctctcagggggtttcaacctgggtgagcctccaagccagtcgccgccccgctgcgccgattcatatatcattgacaccatgaaggaccttcaccagctgccatggctcgagcggttcgtttcggtgatcagtgacagctacaatgaagattacatccagtgaaaacaacatagatagcattaagaaaaaaaagaatggcacatactgatgaatttcatttggaataatatgtttccatgcccctcttgaaaatcaatacaggaaaagtgagatggttctataccttcatgagcttttcctcttgtactcccttttttcctggtttggtgcataagcaaaaggagttgccatcactgattttatttattttttgttaattccctaagcgtgtatatgcttgtttttcttgtgagccacacatgcttgggatggtttcagaacttcttgatgttgaattggataagctacatcagcaattgttcagttgatgcgtgtatctttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0631200, RefSeq:Os12g0631200