BGIOSGA015180

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015180| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015180, complete gene.| tag = OsI_157...")
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Gene Name

BGIOSGA015180

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015180, complete gene.

LocusTag

OsI_15716

Ensembl Transcript ID

BGIOSGA015180-TA

Ensembl Protein ID

BGIOSGA015180-PA

Length

4885

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17333597..17338481

Sequence Coding Region

17337929..17338481,17337260..17337375,17337046..17337168,17336778..17336963,17336137..17336352
,17335721..17335938,17334806..17334881,17334635..17334724,17333597..17334376

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17333597..17338481 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17333597..17338481 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGGTCGCTAGTCCAGTCCGCGATTGCTCCGACCATATACAGGAGGAGCGGCACCGCGCGGTTCCGCGTGCGCGCGAGGGCCACGATGATGCGTACCATGCCAACACGGACCCTCACCCTGGGGGGTTTCCAGGGCCTGCGGCAGACGAATTTCCTGGACTCGAGGTCGGTGATTAAGCGTGACTTCGGCTCTATTGTCGCGAGCCAGATTTCACGCCCCCGAGGGTTGGGGTCAAGAGGGGTGGTCCGCGCCATGTTTGAGCGCTTCACGGAGAAGGCAATCAAGGTGATCATGCTTGCACAGGAAGAAGCGAGGCGCCTGGGCCACAACTTTGTTGGGACGGAGCAAATTCTACTGGGCCTTATCGGTGAGGGCACAGGAATCGCGGCAAAGGTTCTCAAGTCTATGGGTATCAACCTTAAGGATGCCCGTGTGGAAGTTGAGAAGATCATTGGACGTGGTAGCGGGTTTGTGGCTGTTGAGATCCCATTCACGCCTCGTGCAAAGCGTGTCTTGGAACTGTCACTTGAAGAAGCTCGCCAGCTAGGGCATAACTATATAGGATCTGAGCACTTACTTCTGGGGCTACTTCGTGAGGGTGAAGGTGTAGCAGCACGGGTACTGGAAAGTCTTGGTGCTGATCCAAACAACATTCGTACCCAGGTCATAAGAATGGTTGGTGAAAGCACAGAAGCTGTTGGTGCTGGAGTTGGTGGCGGAAGCAGTGGCCAGAAGATGCCTACACTCGAAGAGTATGGCACTAATTTGACTAAGCTGGCAGAAGAGGGTAAACTAGACCCAGTTGTTGGCAGGCAGGATCAAATTGAGCGTGTAACTCAAATTTTGGGAAGGCGGACAAAGAACAACCCTTGCCTAATTGGAGAACCTGGTGTTGGAAAGACTGCTATTGCTGAGGGGCTTGCACAACGTATTTCCAATGGTGACGTTCCAGAAACAATTGAAGGAAAGAAGGTTATTACTCTTGACATGGGGCTCCTTGTTGCTGGTACCAAGTACCGTGGAGAGTTCGAAGAAAGACTGAAGAAACTTATGGAGGAAATCAAACAAAATGATGACATTATTCTCTTTATTGATGAAGTGCACACGCTAATTGGAGCAGGTGCTGCTGAAGGTGCAATTGATGCTGCCAACATCTTGAAACCAGCTCTTGCTAGAGGTGAACTGCAGTGCATTGGTGCCACAACACTTGATGAGTACAGGAAACATATTGAGAAAGATCCAGCTTTAGAGCGACGGTTTCAACCAGTTAAGGTTCCAGAGCCAACTGTTGATGAAACAATACAAATCTTAAGAGGACTTCGTGAGCGATATGAACTGCATCATAAGCTGCGATACACAGATGATTCTTTAATTGCTGCAGCACAATTGTCATACCAGTATATCAGTGATCGCTTCCTGCCTGATAAGGCTATTGACTTGATTGATGAAGCAGGATCTCGTGTTAGGCTCAGGCATGCACAGCTCCCTGATGAAGCCAAGGAGCTGGACAAAGAGCTTCGACAGGTAACCAAAGACAAGAACGAGGCTGTACGTGGCCAAGATTTTGAAAAGGCTGGGGAATTAAGAGATCGGGAAATGGAATTGAAGGCCCAAATTACAGCCATTATTGACAAGAGCAAGGAAATGGTTAAAGCAGAGACTGAATCCGGTGAAGTCGGTCCCCTTGTTACTGAGGCAGATATTCAGCATATCGTGTCCTCTTGGACTGGAATACCTGTGGAGAAAGTCTCATCTGATGAGTCTGACCGTCTCCTTAAGATGGAGGAGACACTCCATACGCGTATCATTGGTCAGGATGAGGCTGTCAAAGCTATTAGCCGTGCCATCCGCCGTGCTCGTGTTGGCCTCAAGAACCCGAATCGGCCTATTGCTAGCTTCATCTTCTCTGGACCAACTGGTGTCGGTAAATCAGAGTTAGCAAAGGCTCTTGCAGCCTACTACTTTGGCTCAGAAGAGGCCATGATCAGACTAGACATGAGTGAGTTCATGGAGAGGCATACAGTCTCCAAGCTCATTGGATCACCTCCAGGTTATGTTGGTTACACTGAGGGTGGTCAACTGACAGAAGCAGTTCGCCGCCGACCATACACTGTTGTTCTCTTCGATGAGATTGAAAAGGCACATCCTGATGTCTTCAACATGATGCTTCAGATCTTAGAAGATGGAAGACTAACTGACAGCAAGGGTCGGACTGTTGATTTCAAGAACACACTGTTGATCATGACATCAAATGTTGGAAGCAGTGTCATTGAGAAGGGAGGACGGAAGATTGGATTTGACCTTGACTATGATGAGAAAGACACCAGCTACAATAGGATTAGAGCTTGGTGA</cdnaseq>

Protein Sequence

<aaseq>MEGSLVQSAIAPTIYRRSGTARFRVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYELHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKELRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTEADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIRAW</aaseq>

Gene Sequence

<dnaseqindica>1..553#1107..1222#1314..1436#1519..1704#2130..2345#2544..2761#3601..3676#3758..3847#4106..4885#ATGGAGGGGTCGCTAGTCCAGTCCGCGATTGCTCCGACCATATACAGGAGGAGCGGCACCGCGCGGTTCCGCGTGCGCGCGAGGGCCACGATGATGCGTACCATGCCAACACGGACCCTCACCCTGGGGGGTTTCCAGGGCCTGCGGCAGACGAATTTCCTGGACTCGAGGTCGGTGATTAAGCGTGACTTCGGCTCTATTGTCGCGAGCCAGATTTCACGCCCCCGAGGGTTGGGGTCAAGAGGGGTGGTCCGCGCCATGTTTGAGCGCTTCACGGAGAAGGCAATCAAGGTGATCATGCTTGCACAGGAAGAAGCGAGGCGCCTGGGCCACAACTTTGTTGGGACGGAGCAAATTCTACTGGGCCTTATCGGTGAGGGCACAGGAATCGCGGCAAAGGTTCTCAAGTCTATGGGTATCAACCTTAAGGATGCCCGTGTGGAAGTTGAGAAGATCATTGGACGTGGTAGCGGGTTTGTGGCTGTTGAGATCCCATTCACGCCTCGTGCAAAGCGTGTCTTGGAACTGTCACTTGAAGAAGCTCGCCAGCTAGGTATAACCTCTCTTTGTTCAAAGATTCAGCTAGTTTCATTTGGTTATAATTGGACACTTTAATTCTTTCCTTATAGCATTTTTTGTCCTGAACTATTGCTTATATACCTCTAGTTTCCAATCAAACCAGCATGTGCTTTGGTTTCATATTGCTATTATCCTGCTCTCAATTTTCGTACTTCACATTAAGTATGCAAAATAATAGTGCTAAATTGGTTGAGAATCTGCATGTGGTGGGTTAATCGCTAATCATGTACAATATGCTTTCTTTCTCCTATGAATAATTACGGCTTAAGAATGATGCTAGAGGTCTTATTAATATGCATCAGATCTGGCACTGTTTACTAAATTATTAATATGCATATTATTACACTTATACTGTACAACAAGTATGCCAAAAAAAGTGAAAAGGTAACAATGGCATTGTTGTTGACTTGATGCTAAGGTCAAGAAAGTATTCACATTTGAGTTTTGAATCTATGCCTTGTGAGACTAGTTATTTAGAAAAATATGCATGGTCTTTTGTCTAATATTCATCATTTTTTATTGTTCAGGGCATAACTATATAGGATCTGAGCACTTACTTCTGGGGCTACTTCGTGAGGGTGAAGGTGTAGCAGCACGGGTACTGGAAAGTCTTGGTGCTGATCCAAACAACATTCGTACCCAGGTAAATAGCTTTACTATTATGTTCCTTAAATCTTAGCCAATCTACTTTCAGTTAAAATTATGCAGGGAATGACATTTGATATGATGTTCAGGTCATAAGAATGGTTGGTGAAAGCACAGAAGCTGTTGGTGCTGGAGTTGGTGGCGGAAGCAGTGGCCAGAAGATGCCTACACTCGAAGAGTATGGCACTAATTTGACTAAGCTGGCAGAAGAGGTATTTTATCAGACTTGTTTGTGCATTCTCTATTGCGTAGATAAATAAGCAAAGACAAGAAACTAATCATTTTCATCTGCAGGGTAAACTAGACCCAGTTGTTGGCAGGCAGGATCAAATTGAGCGTGTAACTCAAATTTTGGGAAGGCGGACAAAGAACAACCCTTGCCTAATTGGAGAACCTGGTGTTGGAAAGACTGCTATTGCTGAGGGGCTTGCACAACGTATTTCCAATGGTGACGTTCCAGAAACAATTGAAGGAAAGAAGGTTAGCTTAGACCATCCTGTCACCTGTGCATCACCATTGTTTTGCATATATGCATGCAAATGAGTACCATCATGCTGACACTTTTTCCAGGGTTTATCACCCTTTTGGGTAAACTCGCTAATTTCATTAACTAGACAAGTAATTATAGTATAAGTTTGCATTTACGAATAATACTAGCTTTCTGGATAGCTTTCTCTAGTACATTGTCCAGATGTAATTGTGAATTCAACTTTTCGCTCGATATCGTGTACTGATGCAACTAATGTTGTTGCATTGGTATTGTGTCCTGACCAGTGAGGACTCAAGGCTATCGTCTGATTTGAATGAGACTTGCACAATTTATAAGATTTTGAGTGGTGTGAAGCTTCTCTTTCTAATTATCATAGTATTGTTTCAGAATACTGATTGGTATTTTACTCGGTTAGGTTATTACTCTTGACATGGGGCTCCTTGTTGCTGGTACCAAGTACCGTGGAGAGTTCGAAGAAAGACTGAAGAAACTTATGGAGGAAATCAAACAAAATGATGACATTATTCTCTTTATTGATGAAGTGCACACGCTAATTGGAGCAGGTGCTGCTGAAGGTGCAATTGATGCTGCCAACATCTTGAAACCAGCTCTTGCTAGAGGTGAACTGCAGGTATATGTGCCTAATTTTGAATCTGTTGCTTCCATGATTATGTTTTTATCATATTTATAGTTTTAATCTGGAGAATGCCTCAAAGCCTCTTGACTCCAGAGACTAATTTGTCCACTTTGCATGTTATCCATGAACAATATATGATTGTTACCTGTTTTTGCCCCTAATTCACCACATTTCTTATGCTTCTGTCTTCAGTGCATTGGTGCCACAACACTTGATGAGTACAGGAAACATATTGAGAAAGATCCAGCTTTAGAGCGACGGTTTCAACCAGTTAAGGTTCCAGAGCCAACTGTTGATGAAACAATACAAATCTTAAGAGGACTTCGTGAGCGATATGAACTGCATCATAAGCTGCGATACACAGATGATTCTTTAATTGCTGCAGCACAATTGTCATACCAGTATATCAGGTTTGCTATGCAGCACATTCTTAGCTAATATGTTTCATCTTTATTAATTTTTGGCCTTTACTGTGGCTATATCAATTCATACCTATTCTTGTTAATTGGCATCATTTTTAACCGTACTATATTTCTCTTGTGCATAGGGATGTTTAGTCTTTTACATATCTGTTTTTTTTTTCTGAAGAGAAGCATATACTTATTTCTGAAATGGTAACTAGGTGCTTGCACAGGTAAGCGCATTGTTTAATGGTCCAGGAGTAGTGTCCTGTGAACTCTGAGTACTACGATAGTACTTACTGAGTTTCACCCTTTATCTGTTAGACCGTCAAAATGCCTTGGAAGATAAAATATATTTTATATTCTGTGCATGATGCTGTTTAGGATCCCTTCCTGGAAGCAAATTAAATATCAGTGATCTATTTGAAGCTGAACAACATAAAGATTGACTTGGATCCATTTCAGATTTCTGGACTAGAAAGGATATATGGTTATAAGTTTGCAAATAAAAATATCTAGTGGGTGTTTGGTTCACTACCACACTTTGCCAAACTATCATGAGGCTATTGTTTGTTTCATTGCCACATTTGCGCTATGCCACAATTTTTTAACCCTAGGATCCAAATATCATGCACTCCTTTTTTTTCTCTTTTTTTGCAAAACCTTGCCTAATTGTTGCCATTGATTTGTTAGCCACACCTTTGGCACGCATGTGTGGCAATGTTAGGGTGTGCACCAAACATGCCCCTAATTTTGCAGAACATTTGGATGGGATTTAAATTCTCAGCAGTTGACATATAATCATTTGATTTTCAATCTAATAAACTTATTTTACTTTCTTTCTTCAGTGATCGCTTCCTGCCTGATAAGGCTATTGACTTGATTGATGAAGCAGGATCTCGTGTTAGGCTCAGGCATGCACAGGTACTACATTGTATTATTCTATGTTGCAGTCTCGTTCACTGTATTATTTCTGTCTAAAGACATGATTCCTTTATGTTGCAGCTCCCTGATGAAGCCAAGGAGCTGGACAAAGAGCTTCGACAGGTAACCAAAGACAAGAACGAGGCTGTACGTGGCCAAGATTTTGAAAAGGTATATAGACTTCTTGCAGAAATCATATAAAGTTCTTAAATGATCTTTTATAGTAAATATTACTGGCACTGCTATTTACTTGTAAACCTATTGAGTTGATTTGGCTTTTTGCACTTTGTGTTGTAAAGTTGCCCAGTGACTCTAAATCATAGCTATAAGCCATCCTTTTATTCCTTCATTCTTAGCATCAATTTTGAATCAACTCTATTGCTTCCAAATTTTGTTTCATGCTATCTCATCATTGTTATATCTTGACAGGCTGGGGAATTAAGAGATCGGGAAATGGAATTGAAGGCCCAAATTACAGCCATTATTGACAAGAGCAAGGAAATGGTTAAAGCAGAGACTGAATCCGGTGAAGTCGGTCCCCTTGTTACTGAGGCAGATATTCAGCATATCGTGTCCTCTTGGACTGGAATACCTGTGGAGAAAGTCTCATCTGATGAGTCTGACCGTCTCCTTAAGATGGAGGAGACACTCCATACGCGTATCATTGGTCAGGATGAGGCTGTCAAAGCTATTAGCCGTGCCATCCGCCGTGCTCGTGTTGGCCTCAAGAACCCGAATCGGCCTATTGCTAGCTTCATCTTCTCTGGACCAACTGGTGTCGGTAAATCAGAGTTAGCAAAGGCTCTTGCAGCCTACTACTTTGGCTCAGAAGAGGCCATGATCAGACTAGACATGAGTGAGTTCATGGAGAGGCATACAGTCTCCAAGCTCATTGGATCACCTCCAGGTTATGTTGGTTACACTGAGGGTGGTCAACTGACAGAAGCAGTTCGCCGCCGACCATACACTGTTGTTCTCTTCGATGAGATTGAAAAGGCACATCCTGATGTCTTCAACATGATGCTTCAGATCTTAGAAGATGGAAGACTAACTGACAGCAAGGGTCGGACTGTTGATTTCAAGAACACACTGTTGATCATGACATCAAATGTTGGAAGCAGTGTCATTGAGAAGGGAGGACGGAAGATTGGATTTGACCTTGACTATGATGAGAAAGACACCAGCTACAATAGGATTAGAGCTTGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015180