BGIOSGA015188

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015188| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015188, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA015188

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015188, complete gene.

LocusTag

OSJNBA0072K14.12

Ensembl Transcript ID

BGIOSGA015188-TA

Ensembl Protein ID

BGIOSGA015188-PA

Length

5001

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17087038..17092038

Sequence Coding Region

17091063..17092038,17090863..17090918,17090050..17090251,17089435..17089672,17087792..17087939
,17087038..17087307

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17087038..17092038 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17087038..17092038 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCTTCCCATCAGCAGCTTCTCACGGCTGCCGCAGTGGTGGTTCTCGCCTCTCTGCGTGCGGTGGCGCAGCCCGCCGGCGACGGCTATGGCAACGCCACCTTCTCCCTCTGCTCCGGCGTCGACAACACCCAGGCGGCGGGCGGCCCGTTCTACTTGGTCCGGCAGACTACTGCCTCCGAAGCCGTCAAGGCGGCCACCGCTGCGACGGCGGACAGGTCCTCGAGCGTGGTTAGCGACGGGGAGTACTACGCGCTCGCGCAGTGCCGCGCCGACGTGCCCGCGGGGGACTGCTCGCGGTGCCTTGCCGCCTGCCTCGGAGTCATCGGCGGGAGCGGAGACGACTTGTGCGAGAAAGCCGCGGTGCGCTACGACGACCGCTGCCTCCTCCGCTTCGCCAAGGGCGACGACTTCACCGGCTTCGACGTCGACGAGCACACGGCGACCGTGTTCGACGGCGGGCGCAGCGGCCTCACCGTCGCCGAGGAGGTGCCCACCCGCCTGCTCGCCACGGTGGCGGCCGCCGCCCCGGCGAGCAGGTCGAGGACCGCCGCCGGGATAGCGTCCTACGGCGGCGGCGGCAGCCTGTACGGGCTGGCGCAGTGCACCACCCAGATCCCGGCGCCGGACTGCGCCAGGTGCCTCCTCGGCGCGCTGTCCCGCCTCTCGGAGGACTTCAACTCCACCGCCGCCGGGATGCAACTGCTTCGCTCCAGCTGCATGCTGCGCTACGGGAGCTCCCTCTTCTTCAACCAGTCGTCGCCGCTCCTCCCCGTCGCCCACCTCGCCATCGCCCCGGCCGGTGGAGGCGCCGGCCCGCCCGCAGCCGCTCCACCATCACCAGGCCACCGTCCTGCTCGAGCTCGAACCATCGCCATTTCCGCTGGGCAGCCTGGGTTTGCCGCTCTCGCGGCGCTCGCGTTGGCCCTTCTAATTTCATGGCACATTCGACGAACAAAGACGAGATCCAAAGGTAAATTCGCAGAACGAAATAAGCTTGGATCTGGTGGCTGTGGCACAGTCTACAAGGGGATATTGCATAACAATGAAGAAATAGCCGTGAAGAAACTCACCAGAAAAGATTTGAGAGAAGTGGAAAGGGAGGTTTCCCTGGTGGCGCAGCTTCAGCACGAGAACATTGTCAAGTTCTTGGGCCACTGCTTCCGGCACGACAAAATGTTCCTCGTCTACGAATACCTGAGCAACGGGACTCTGAGCCGCTATTTCAAATGTTCAGCCGACTGTCAGAAGCTGGACTGGCCAAAATGGCTTAACATCATCAGAGGGATCGCTCGTGGCCTTTCTTATCTCCACAGAGATTCTGGGAAGGACATCGTCCATCGTGATCTCAAACCTTCCAATGTCCTCCTTGATTCCAACTTCAATGCAAAGATTGCTGACTTTGATCTTGCAAGACCATACGACCGGGACAAAAGCCATGAGAGCACTCAAAAGAGGGCAGGCACCCATGGATACATAGCTCCAGAACTGTATGCGGGAGGGGAATACTCTACCAAATCGGATGTGTACAGTTTCGGCGTGATGACGCTGGAGATCATAGTTGGTCAGAGCATCAGCAAGTTCGACAACGATGACTGCACGGGCCTCGTAGAATATGCATGGCAACACTTTGTGAGGCGTACGGTTGAAGACATGCTGGACGGTGACCATCTCGGCCTGGTGAACGACGAGCAGGTGCAGCAGGCGTCACGGTGCGTGCACGTCGCGCTCCTCTGCGTCCAGAGCAACCGCTCCGTGAGGCCCTCCATGGACAGGGTCCACGGCGTGCTCGGCAGCAAGGAGGAGCTGGAGGAGCCCTCCACCCCCGGCTTCGTCGCGGCGGCGGCGGCCGGCGTTTCGCCGTCGGCTTACTCTGTGAACAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAASHQQLLTAAAVVVLASLRAVAQPAGDGYGNATFSLCSGVDNTQAAGGPFYLVRQTTASEAVKAATAATADRSSSVVSDGEYYALAQCRADVPAGDCSRCLAACLGVIGGSGDDLCEKAAVRYDDRCLLRFAKGDDFTGFDVDEHTATVFDGGRSGLTVAEEVPTRLLATVAAAAPASRSRTAAGIASYGGGGSLYGLAQCTTQIPAPDCARCLLGALSRLSEDFNSTAAGMQLLRSSCMLRYGSSLFFNQSSPLLPVAHLAIAPAGGGAGPPAAAPPSPGHRPARARTIAISAGQPGFAALAALALALLISWHIRRTKTRSKGKFAERNKLGSGGCGTVYKGILHNNEEIAVKKLTRKDLREVEREVSLVAQLQHENIVKFLGHCFRHDKMFLVYEYLSNGTLSRYFKCSADCQKLDWPKWLNIIRGIARGLSYLHRDSGKDIVHRDLKPSNVLLDSNFNAKIADFDLARPYDRDKSHESTQKRAGTHGYIAPELYAGGEYSTKSDVYSFGVMTLEIIVGQSISKFDNDDCTGLVEYAWQHFVRRTVEDMLDGDHLGLVNDEQVQQASRCVHVALLCVQSNRSVRPSMDRVHGVLGSKEELEEPSTPGFVAAAAAGVSPSAYSVNS</aaseq>

Gene Sequence

<dnaseqindica>1..976#1121..1176#1788..1989#2367..2604#4100..4247#4732..5001#ATGGCAGCTTCCCATCAGCAGCTTCTCACGGCTGCCGCAGTGGTGGTTCTCGCCTCTCTGCGTGCGGTGGCGCAGCCCGCCGGCGACGGCTATGGCAACGCCACCTTCTCCCTCTGCTCCGGCGTCGACAACACCCAGGCGGCGGGCGGCCCGTTCTACTTGGTCCGGCAGACTACTGCCTCCGAAGCCGTCAAGGCGGCCACCGCTGCGACGGCGGACAGGTCCTCGAGCGTGGTTAGCGACGGGGAGTACTACGCGCTCGCGCAGTGCCGCGCCGACGTGCCCGCGGGGGACTGCTCGCGGTGCCTTGCCGCCTGCCTCGGAGTCATCGGCGGGAGCGGAGACGACTTGTGCGAGAAAGCCGCGGTGCGCTACGACGACCGCTGCCTCCTCCGCTTCGCCAAGGGCGACGACTTCACCGGCTTCGACGTCGACGAGCACACGGCGACCGTGTTCGACGGCGGGCGCAGCGGCCTCACCGTCGCCGAGGAGGTGCCCACCCGCCTGCTCGCCACGGTGGCGGCCGCCGCCCCGGCGAGCAGGTCGAGGACCGCCGCCGGGATAGCGTCCTACGGCGGCGGCGGCAGCCTGTACGGGCTGGCGCAGTGCACCACCCAGATCCCGGCGCCGGACTGCGCCAGGTGCCTCCTCGGCGCGCTGTCCCGCCTCTCGGAGGACTTCAACTCCACCGCCGCCGGGATGCAACTGCTTCGCTCCAGCTGCATGCTGCGCTACGGGAGCTCCCTCTTCTTCAACCAGTCGTCGCCGCTCCTCCCCGTCGCCCACCTCGCCATCGCCCCGGCCGGTGGAGGCGCCGGCCCGCCCGCAGCCGCTCCACCATCACCAGGCCACCGTCCTGCTCGAGCTCGAACCATCGCCATTTCCGCTGGGCAGCCTGGGTTTGCCGCTCTCGCGGCGCTCGCGTTGGCCCTTCTAATTTCATGGCACATTCGACGAACAAAGACGAGATCCAAAGGTAAATTGCAACCAATAGCCCAATTCGATCAATTCCATTGCCATCCCTATAATAATTAAGCAGCACTCCTAGTAGTTAACCACGGTGAAATTTCATCATCAGTGAGCGGTAATTACAGTTACCAGACTCTGGTGAACTCGACAGGTAAATTCGCAGAACGAAATAAGCTTGGATCTGGTGGCTGTGGCACAGTCTACAAGGTAATCCGATCGAACACCGTCATATTCTTCATGGTTGCCTGCCCTGAACCTCCGCAGGTGTTACAATAATATTCCCAATTTTTTTATGTGGTCAATCAATCTACTACAATAATGTTGTCATGCATATCCCTCTGTCCAATTTCATTTCTTTTAGATAAAAGTAAGCTTTATTAATCTTACTCAGTAAATCATATCAAGGTGGTCCAATTGCCTTGAGAGCACTCCCGTACGTATCCAATTTCGTTAAGGCATGCATATACGCATGTATTTAAAAACTCAGATTTGTTGGTTTGGATGAACAATTGGCTAGATCATATGTGTCTGTTTAGTTCACAGAAACCGTGTAAGTTGGTTTATATATAGTTAGTTTGCAGTATTTCCGTACGACATTACTGGTTTTGTAGCTGTTAACTGTTAATTTCATCACAAGAGAAAACTTTGCTTCTTTATACTAATAAGGAAGATGATTTTATATTCCCAGAGAAAAAGTACTTCTCAAGATTTATATGTGCGGCACCTTCTATAACTGGGCGGAATTGGATGGACCCATAGGGAGGAGTATTTTACAACGGATAACTTCAAGTTCTTTTTGTTGCACAAATTACGCACAGGGGATATTGCATAACAATGAAGAAATAGCCGTGAAGAAACTCACCAGAAAAGATTTGAGAGAAGTGGAAAGGGAGGTTTCCCTGGTGGCGCAGCTTCAGCACGAGAACATTGTCAAGTTCTTGGGCCACTGCTTCCGGCACGACAAAATGTTCCTCGTCTACGAATACCTGAGCAACGGGACTCTGAGCCGCTATTTCAAATGTATGCATTTTAGCTTGTTATCCAGTTCTCAAATACATGCCGTTGCATTTTCAAATCTCAAAAATCTAACTCACTAATATATGCAAAAACAAAATAGATTTGACATGTGAAAATGATATTGCTAGATTTGCTATCTGAAAACAACATCAGTTGACCTGTCCTGAAATATGTTTGCACTGGAAGTAATTAATTATATATTTAATATATGTGAGGACTAAAACAATGATCAACCATGCGTATGGCAGGTATGTTGATGTTTCAAATGACAAGTAAAAGATAACGGAGTACTACACTATAGATCAGGAGTACTGCACTATAAATCAAGCATAAGACCACAGGGGATGCAGGTCTGAATGAATTTCATGGTGATTTTGTAGGTTCAGCCGACTGTCAGAAGCTGGACTGGCCAAAATGGCTTAACATCATCAGAGGGATCGCTCGTGGCCTTTCTTATCTCCACAGAGATTCTGGGAAGGACATCGTCCATCGTGATCTCAAACCTTCCAATGTCCTCCTTGATTCCAACTTCAATGCAAAGATTGCTGACTTTGATCTTGCAAGACCATACGACCGGGACAAAAGCCATGAGAGCACTCAAAAGAGGGCAGGCACCCAGTATGTTCTAGCAACTCTGTTTAATTCTCATGAGCATGCATGTGTGAAGCGCGGTATTCCTTTTTTTTTTTAGTATTACACCCGCTAATACGTCCCCTAAACAAAAATGTGTGATCAATTTTTTCATTATTGAAAAAAGAGATAAAATCACTAATGTTCCTGAAATATTTCGAATGTCATTTGGGCAATTGGGCAACACGTATAGACTTGAGTACCAACCTTCAATTCATTATATCCTGGCTATCTTTGATCTCATATTTCTTTTATTTTTTAAAATATGTTTATGGGTTTTCATCGTGTCACTTGTTGCACATTTTAATTCGGTGCCTTAGTGATCTGTTAAATATCATGACCAATTGACACGTGATTTCAGTTCACGCACAGTATGCAAGTCAACTATGTTAACACAAGAGTAAAACAATGCTAGTCTCCAGTGTGCTACGCCTCTTTCTGAATTTGCATTTTGTATACCTTAGAAAAAATGTAGATGTAGGGCATGTTGATTGTTGATGTTAAAATTATTTTAGAAAAAACTGTAAAAATATGACCTTATATACACTGGACAAAAAAAAAGGCAAGTATTTTTCCTATCCTTGTGCAAGTTATTTGTCTTTTGTACATTAGACAAAGAATCCTATTCTTCACAATTTTACCGTGCACAAACATACTCTAATACTCCCTCCATCCCAAATTGATCATCATATAGTGTTTGTGTATCAAGACCAAGAATAATTTAAACCGCATCGATCAAGATACCATGCACAATATGCACACATTCTTTCACAATGCATGTATTGATTAAAAACACAATGCACAATTACATCCTTAGTATGCATACATTTTCCCGTGCTTGATAAAATCCGTGCCCATGCAATTATATGATAATCAATTTGAGAAAATTTGGTTTTCATTATAGATGATCNATTTGGAAATGATGGAGTATGATATTTGTGTACTTATTTTATTCATAATTTTAGCGAAGGGGTAGCCAGACCTAACAGCAGCTTTAACCTTGTCCTGTTTAACACAAAGATTGATTTTACNATCCTGACCTTTCATGAGCGTCTAAACATTAACTTATACAGTGAGATTTTTGACCTTGTCAAAATTTAAAGTTGTTTAGGATGGCGAGGCTTTGATGTTGTGATTTGTTCTATGGACTATGGCTAAAAATATTTTTAATTATAAATTAGTAGATATCTTTGTAACATTATTAAAAGGAAAATATGTTCGTATTACTGCCTCTGTTCTCAAAAGGATGACATTGTATAATGCGTGTAGTGAAATCTTGATTTGTCATGACCATACGATAAAAGGGTTAATTTAGGGTTCAGCACCACGTTAAACAAAACCGCTCTAAATTTGGTTCAAGGTTGAGAAGGGCACAATTTTAAGGGTTGATGTCCACTATATATGCGAGTGTAACTGTTTCCTTTTTTTTTCAAAAGAAAAAAATACCACAAGGATTTATTGGTTTCACTGTTTCTCACTGAAGTGGATACATAGCTCCAGAACTGTATGCGGGAGGGGAATACTCTACCAAATCGGATGTGTACAGTTTCGGCGTGATGACGCTGGAGATCATAGTTGGTCAGAGCATCAGCAAGTTCGACAACGATGACTGCACGGGCCTCGTAGAATATGTAAGTAATATCATGATATTTGTTTCTTCTTCTCCTTGATGTTATCTGAACTGACATGGCAGCATCTCGAAGAATATGTTAGGGGATGGGGAGGCTTTAGGATCAAGTTTCAAAGAAACAAACATACCCTCTCTATTCCAAAATATAGATAACCAGTACTCCCTCTGTTTTCGGTTATAAGACGTTTTAACGTCAAACTGCTTCAAATTTGACTAAGTTTGTAGAAAGAAAAAACAGCATTTTCAACTCAAGACATATTATAAAAATATATTCAATTATTGATTTAATAAAACTAATTTGGTATTATAAATATTACTATATTTGTCTATAAATGTAGTCAAATTTAAAGTAGTTTGATTTTGACCAAAGTTAAAGACGTTTTATGACCTAAAACGAAGGTTGTACTTACGAATCTGATTAGAATACTCCAGAGTATTCTCGAGGACAATGAAAAGCTGTAAAAACTGACTCATATATTCAACAGGCATGGCAACACTTTGTGAGGCGTACGGTTGAAGACATGCTGGACGGTGACCATCTCGGCCTGGTGAACGACGAGCAGGTGCAGCAGGCGTCACGGTGCGTGCACGTCGCGCTCCTCTGCGTCCAGAGCAACCGCTCCGTGAGGCCCTCCATGGACAGGGTCCACGGCGTGCTCGGCAGCAAGGAGGAGCTGGAGGAGCCCTCCACCCCCGGCTTCGTCGCGGCGGCGGCGGCCGGCGTTTCGCCGTCGGCTTACTCTGTGAACAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015188