BGIOSGA015193

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015193| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015193, complete gene.| tag = OsI_156...")
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Gene Name

BGIOSGA015193

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015193, complete gene.

LocusTag

OsI_15678

Ensembl Transcript ID

BGIOSGA015193-TA

Ensembl Protein ID

BGIOSGA015193-PA

Length

6998

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16835770..16842767

Sequence Coding Region

16842450..16842767,16840135..16840362,16839322..16839492,16838751..16838896,16838190..16838323
,16837084..16837835,16836759..16836869,16836530..16836655,16835770..16835934

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16835770..16842767 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16835770..16842767 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCGCCGAAACCTAATCATCACCTCCGACTCCGACTCCGACGACGGCGGCGGCGGCGGCGGCGCGGCCACCGCCTCCACCCCCGCGTCCGCCTCGGCGTCCGCCTCCTTCCCGAGCGTAAGCGGCGGCGGCTGCGGCGATGGCTGGCCCTCGCCGCAAAACCCTAGGTCAGTCCCCGTTCAGTTCCCCTCCCCGTCCTCGCCTCCCCCTTCCCCTCCCATAGAGATTTCCGATGAGGAGGAGGCGGAGGCGGAGGTGGTGGTGGAGGAGGAGGAGGTGGTGGTGGTGGAGGACGAGGAGGAGGAGTATGAGGAGGTGGACGAGTTCCTGAGGGGACTCGGGCTGCAGCTGCGCCCGGAGTGGCTCGAGTCCTGCGCCGCCGGGGTACCCGGGTTCTACGGCCTCGGCGGCGTGGAGGCGATGGCCAGGCGGTGCTTCGAGCAGTTCCTCTTCGCCGACATGAACGCGTGCGGCGCGGGCGTGCTCCCGGAGGGCGTTGGGAGCATGCACAACGCCGTCCTCGATGGCCCCTTCGTGCTGCAGGTTGATGAGATTGTCAACCTGTCAGCTCCTTTAAGGGAAAGATATCGTGATGCACATGCGGGGCCCAAAAGATGTTTAAAGTTATCAATGACAGATGGGATCCAACGCATATATGGAATGGAATACAGGCCGATCAAAGACCTGGAAGTTCTTGCCCCTGCTGGTTTTAAGATTGTTATAAGAAATGTGCACATAAGGAGAGGCCTTTTTATGCTGGTGCCCGAGGTCATTGAGATTCTTGGGGGTGTTGATGATGAACTGGATGAAGCACGTAATAGGCTTGTTTCTGAAGTAAACAAACCGCCACGTGGCAAAAGGAAACAAGGTGGATTACCATTGTCTTCGAGAGCCACTCTAGCAGCCTGGCCAACAAATGCCAATGCTACAAATGATGCCGAGCAAGGAGCCTCAGTGCCAAGAACAGTGAATACCCCTCATCCAACCAGATTAGGTAATGCTTCCCATGCTTCTCAGGTTGGTAGAACTACACAACCTATGGTGGACAATCTTATCCCTCATGTTGTAGTAAGCAATGCCCAAGAGCAAAGCCGACATATCCAAGAAATCACCATGCAGGGCCAACCTACTTCTCTTAATAGGCACAATAAAGAAGCTTCTGCATCTACTTATAGATATAATGCCCAATGCAGCATTAGTGGAACTACACGAGCTATGGCAGACGAACATGTTTTAGTAAGCAATGCCCAAGAGCAAAGCCCGCATATCCAGGAAATCACCATGCAGGACCAATCTACTTCTCTTAATGGGCGCAATAAAGAAGCTTCTGCATCTACTTCTTATAGATATAATGCCCAATGCAGCATTAGTGGAACTACACGAGCTATGGCAGATGAACGTGTTGACCCTTCCTTTGTTGGTAATAACGTACATGAACAAATGCAACGTGTTCAAGGTATCACCATGCAGGACCACATTAGTGCTTCTAGTGAGAGCAAAAGGGAACTTTCTGTGACTACCCCTTCTGGATATGATTCCCGACTTGCGCCACATGGTGTTGGCAATACTGGCACAAGAAGTGGGGAAGCCACACGATCTTCAAATGTGGATGATGGGATCAATAACATTGGGCATCCGATCAGTCTATGTGGCGAAAATGAAAAGCCTTTTACTTACATATTCAACATGTTAGCTGATTGGGGTGTTCAACAGGATACAGTACCTTATATTCAAGGAAAAATTAAGGGTTTGATCACTTCTGTCAAACGGTTTCAATACAAGCAATCCATGCAATACGATCTTTATGTCTACATAGATGATGGTAGTTTTATTACAGAGGCCTTTGTTGACCGTGATATTGTACAGAACATGATTGGCCTTTCCGCTGAGGAGCTTGCAGCTGCTCTTTCTTCTGGTGGCCCAGCACAAGCCAATATAAGAAAAACTATGAAAGCATTTGAGCATTTCCTGGTGAACTTTGAGGGCACAATCCTTATTGAGCTCAACAGAGATTCTTCTGTTCCTATTGTACGTGAGATGAATAAAGGTTGTTCAAGTTCGGATGCGTGGCAGCTGCTTCGGAGGGTGAAAACATTTTCTGGTCAGGGCTACATGCGGAGCCTGGATTTTATGGACACCACTCCATGA</cdnaseq>

Protein Sequence

<aaseq>MRRRNLIITSDSDSDDGGGGGGAATASTPASASASASFPSVSGGGCGDGWPSPQNPRSVPVQFPSPSSPPPSPPIEISDEEEAEAEVVVEEEEVVVVEDEEEEYEEVDEFLRGLGLQLRPEWLESCAAGVPGFYGLGGVEAMARRCFEQFLFADMNACGAGVLPEGVGSMHNAVLDGPFVLQVDEIVNLSAPLRERYRDAHAGPKRCLKLSMTDGIQRIYGMEYRPIKDLEVLAPAGFKIVIRNVHIRRGLFMLVPEVIEILGGVDDELDEARNRLVSEVNKPPRGKRKQGGLPLSSRATLAAWPTNANATNDAEQGASVPRTVNTPHPTRLGNASHASQVGRTTQPMVDNLIPHVVVSNAQEQSRHIQEITMQGQPTSLNRHNKEASASTYRYNAQCSISGTTRAMADEHVLVSNAQEQSPHIQEITMQDQSTSLNGRNKEASASTSYRYNAQCSISGTTRAMADERVDPSFVGNNVHEQMQRVQGITMQDHISASSESKRELSVTTPSGYDSRLAPHGVGNTGTRSGEATRSSNVDDGINNIGHPISLCGENEKPFTYIFNMLADWGVQQDTVPYIQGKIKGLITSVKRFQYKQSMQYDLYVYIDDGSFITEAFVDRDIVQNMIGLSAEELAAALSSGGPAQANIRKTMKAFEHFLVNFEGTILIELNRDSSVPIVREMNKGCSSSDAWQLLRRVKTFSGQGYMRSLDFMDTTP</aaseq>

Gene Sequence

<dnaseqindica>1..318#2406..2633#3276..3446#3872..4017#4445..4578#4933..5684#5899..6009#6113..6238#6834..6998#ATGAGGCGCCGAAACCTAATCATCACCTCCGACTCCGACTCCGACGACGGCGGCGGCGGCGGCGGCGCGGCCACCGCCTCCACCCCCGCGTCCGCCTCGGCGTCCGCCTCCTTCCCGAGCGTAAGCGGCGGCGGCTGCGGCGATGGCTGGCCCTCGCCGCAAAACCCTAGGTCAGTCCCCGTTCAGTTCCCCTCCCCGTCCTCGCCTCCCCCTTCCCCTCCCATAGAGATTTCCGATGAGGAGGAGGCGGAGGCGGAGGTGGTGGTGGAGGAGGAGGAGGTGGTGGTGGTGGAGGACGAGGAGGAGGAGTATGAGGAGGTGGAGGAGATCGAGGACCCCGATGGGGACTCCCCCTTCGTCGACGCCCCCGAGCACATCTCCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCTTCAAGCTTGAGCCCGTCGATGTTTACTTGTTTCAGTTCGGTAGTTCATGATTCATCTGACACTCAATAGAATGGAAAGCTGTGGTTTTCTTCTTTTGTATATCAACTCATCAAGTGTGCCATGCGTGCTGAATTTCGTAGCACAAATGGTACCGCGCCGAAATAAACATGATTTTGATAGCACAGTAAATTGCTTATTCTGAAAAGTAGTTGTCAGTTCCTGTGTATTTCTTTCCTAGCACTGATGCCTTTATACGTCTTGTAAGTTCAATTTCCAATCTCCATACAGGCATACACTAGCTCATGCCATATTCAATAATTTTTTAACTTTAGCATACACTAATTGTACATTGTTGTAGTTTTGCATTTTTTTTTGTGATAATGTGTTCTGGGGTTTTCCTTTTGTTCTTTTTTTCCTATGGTTTAACTGACTCTTGAGTTTGTAAGGTTGATGAGATTGTCAACCTGTCAGCTCCTTTAAGGGAAAGATATCGTGATGCACATGCGGGGCCCAAAGATGTTTAAAGTTATCAATGACAGATGGGATCCACGCATATATGGAATGGAATACAGGCCGATCAAAGACCTGGAAGTTCTTGCCCCTGCTGGTTTTAAGGTCATTGCTTTCTCTGTTCCTTTTTCTTCAGAACATTTGTATTTTGCGTTCATTTTATTAGTTTACATTTAAAAATTATCAGTGAATTTTTTTTTCACACAACATAGTTAGATTTATCCATTAGCATTCAATATAGCAAACTAATTATCACAAAACTCTGGTTTTTCCCTCCTAGATAGTAGCTTCCATGGTCACTGGTGCTCTGTTAGACTCCCTGCCTTTTCAATTTACTTTTCTCTTAAGAAATGGTTTCTGGAGACAGGCTTCTACAATTAAACGATAAATGCTTATCAATCTATGTAAACAATTTGATTGCGAACAAACTATTGACTAAGTGATAATACAAAATAGTGTGACTGGAAGAGACATTTTTTCCATTTGCTATTTTTTGTATCAACAGCTCATAACTTGTCAACACATCTCAGATTGTTATAAGAAATGTGCACATAAGGAGAGGCCTTTTTATGCTGGTGCCCGAGGTCATGAGATTCTTGGGGGTGTTGATGATGAACTGGATGAAGCACGTAATAGGCTTGTTTCTGAAGTAAACAAACCGCCACGTGGCANAAGGTATATGTTGTGCATTAGTGAATTGAGCAGATTTACATACATGACATTTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACGAGGCAGTATAATACTGGGCCGTCTTTTAGAAAGGGAAACCACCAAAATCTCCCAAACCCCACGATCAACCAACAAAAATTTCTCCCCCAAAATGAGGCGCCGAAACCTAATCATCACCTCCGACTCCGACTCCGACGACGGCGGCGACGGCGGCGGCGCGGCCACCGCCTCCACCCCCGCGTCCGCCTCCTTCCCGAGCGTAAGCGGCGGCGGCTGCGGCGATGGCTGGCCCTCGCCGCAAAACCCTAGGTCAGTCCCCGTTCAGTTCCCCTCCCCGTCCTCGCCTCCCCCTTCCCCTCCCATAGAGATTTCCGATGAGGAGGAGGCGGAGGCGGAGGTGGTGGTGGTGGAGGACGAGGAGGAGGAGTATGAGGAGGTGGAGGAGATCGAGGACCCCGATGGGGACTCCCCCTTCGTCGACGCCCCCGAGCACATCTCCCCTCCGCCGCCCCCTCCGCCTCCGGCGCGAACGCCGATGCCGACGCCGACGCCGACGCCGACGCCGACCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGTCCCCGATTCCGCCGTCGAGCACCCCGGTGTCTGCGCTGAGCGGGCCGCTGCGGCAGGTGGACGAGTTCCTGAGGGGACTCGGGCTGCAGCTGCGCCCGGAGTGGCTCGAGTCCTGCGCCGCCGGGGTACCCGGGTTCTACGGCCTCGGCGGCGTGGAGGCGATGGCCAGGCGGTGCTTCGAGCAGTTCCTCTTCGCCGACATGAACGCGTGCGGCGCGGGCGTGCTCCCGGAGGGCGTTGGGAGCATGCACAACGCCGTCCTCGATGGCCCCTTCGTGCTGCAGGTTATACCATTTTCTCTTTACTTAGAATGCGTGGTTAAATTTTTTGGTCATACTTTTGTTACTGAGCTCTAGGTTCCCTATACCTGTACTGCTGTGGTGCCGCCTAGTGTGGCATGCTTGGTGTGATCTGCGGAATTTTGGAAGGCACTTAAGATCAAATATCTGCTAGTATTTTCAGGGAATAAATATGTGCTTCAAGCTTGAGCCCGTCGATGTTTACTTGTTTCAGTTCGGTAGTTCATGATTCATCTGACACTCAATAGAATGGAAAGCTGTGATTTTCTTCTTTTGTATATCAACTCATCAAGTGTGCCATGAGTGCTGAATTTCGTAGCACAAATGGTACCGCGCCGAAATAAACATGATTTTGATAGCACAGTAAATTGCTTATTCTGAAAAGTAGTTGTCAGTTCCTGTGTATTTCTTTCCTAGCACTGATGCCTTTATACGTCTTGTAAGTTCAATTTCCAACCTCCATACAGGCATACACTAGCTCATGCCATATTCAATAATTTTTTAACTTTAGCATACACTAATTGTACATTGTTGTAGTTTTGCATATTTTTTTTTGTGATAATGTGTTCTGGGGTTTTCCTTTTGTTCTTTTTTTCCTATGGTTTAACTGACTCTTGAGTTTGTAAGGTTGATGAGATTGTCAACCTGTCAGCTCCTTTAAGGGAAAGATATCGTGATGCACATGCGGGGCCCAAAAGATGTTTAAAGTTATCAATGACAGATGGGATCCAACGCATATATGGAATGGAATACAGGCCGATCAAAGACCTGGAAGTTCTTGCCCCTGCTGGTTTTAAGGTCATTGCTTTCTCTGTTCCTTTTTCTTCAGAACATTTGTATTTTGCGTTCATTTTATTAGTTTACGTTTAAAAATTATCAGTGAATTTTTTTTTCACACAACATAGTTAGATTTATCCATTAGCATTCAATATAGCAAACTAATTATCACAAAACTCTGGTTTTTCCCTCCTAGATAGTAGCTTCCATGGTCACTGGTGCTCTGTTAGACTCCCTGCCTTTTCAATTTACTTTTCTCTTAAGAAATGGTTTCTGGAGACAGGCTTCTACAATTAAACGATAAATGCTTATCAATCTATGTAAACAATTTGATTGCGAACAAACTATTGACTAAGTGATAACACAAAATAGTGTGACTGGAAGAGACATTTTTTCCATTTGCTATTTTTTGTATCAACAGCTCATAACTTGTCAACACATCTCAGATTGTTATAAGAAATGTGCACATAAGGAGAGGCCTTTTTATGCTGGTGCCCGAGGTCATTGAGATTCTTGGGGGTGTTGATGATGAACTGGATGAAGCACGTAATAGGCTTGTTTCTGAAGTAAACAAACCGCCACGTGGCAAAAGGTATATGTTGTGCATTAGTGAATCGAGCAGATTTACATACATGACATTTAATTGCAACACATGCTTCAAACTTGGATTTTAAGCAATGACTTGAGAGTTATTTTTGCGAATATCCTAGTAGTTGGATAAATCATATCATTCAAATGCAAATGTGCCTGTTTAGGATCTGTGGTAGTGGCCTTTCTGTGGTAATGGTGGGAGCCATATGCTGGGAGGTCCTTTATGAACAACGGAACTTTCTTTGCCTTCCATTTCTTTTCAATTTCATGGAATTTATTTAGCTTCTAAGTTTAAACAAAACAAATACTCAATGTTCACATCTATCCAGTCAGCTGCATGCCAGAAATTTTGTTTTTCAATGTGTATATAACATTTCTTGACAGGACACTGCTTGTTTGTTCACAAGTCACAACTCTTCATGCTGCAGGAAACAAGGTGGATTACCATTGTCTTCGAGAGCCACTCTAGCAGCCTGGCCAACAAATGCCAATGCTACAAATGATGCCGAGCAAGGAGCCTCAGTGCCAAGAACAGTGAATACCCCTCATCCAACCAGATTAGGTACTATATAGATTTCATTGATAGATTGATTGTGTGGCGAACTAGCTTTTGTTCTTAGAAAGAATGGAAACTGAATTATAAATTAGTAGTAATTGTTTTGCTGGAACACAGAGCATTGCTATAACGTGGCCGTTTTTTTAATCCATTGGCTTTCAATGCTAAGTTAGGCTAGTTTGTCCACAATTGCTGCAACAAGCACTCTCAGTAGACTACCTGCCAGATTTTTTTCGTTCTCCATTCATGTGGTAACGACGAACCGAGTTTAGCCAAATTAAATGGGATTAACATTGCAACTCCTCAGTTTTATATAATATTCTTCATCATGTTTTGTGATCTCAAAATTTCAATGCGCAGGTAATGCTTCCCATGCTTCTCAGGTTGGTAGAACTACACAACCTATGGTGGACAATCTTATCCCTCATGTTGTAGTAAGCAATGCCCAAGAGCAAAGCCGACATATCCAAGAAATCACCATGCAGGGCCAACCTACTTCTCTTAATAGGCACAATAAAGAAGCTTCTGCATCTACTTATAGATATAATGCCCAATGCAGCATTAGTGGAACTACACGAGCTATGGCAGACGAACATGTTTTAGTAAGCAATGCCCAAGAGCAAAGCCCGCATATCCAGGAAATCACCATGCAGGACCAATCTACTTCTCTTAATGGGCGCAATAAAGAAGCTTCTGCATCTACTTCTTATAGATATAATGCCCAATGCAGCATTAGTGGAACTACACGAGCTATGGCAGATGAACGTGTTGACCCTTCCTTTGTTGGTAATAACGTACATGAACAAATGCAACGTGTTCAAGGTATCACCATGCAGGACCACATTAGTGCTTCTAGTGAGAGCAAAAGGGAACTTTCTGTGACTACCCCTTCTGGATATGATTCCCGACTTGCGCCACATGGTGTTGGCAATACTGGCACAAGAAGTGGGGAAGCCACACGATCTTCAAATGTGGATGATGGGATCAATAACATTGGGCATCCGATCAGTCTATGTGGCGAAAATGAAAAGCCTTTTACTTACATATTCAACATGTTAGCTGATTGGGGTGTTCAACAGGATACAGTACCTTATATTCAAGGAAAAATTAAGGTTTGCTTGCTTCTTAGTACATTAGTTGCTCATTTCCAAATGGTTTTGTTTACCAAAAACTTTTTAGGAGTACTTCAACTGCATCAGTTCCATATTTCCAGTTTGACCAAACTAGTTTTCAATGGCTCAAGAATGTTGGAACATTCTCTTGCACACATTATTTTTTTAATAATATATGGAAATGAGTAAACGTTGATTGATATAACTGCTACAGGGTTTGATCACTTCTGTCAAACGGTTTCAATACAAGCAATCCATGCAATACGATCTTTATGTCTACATAGATGATGGTAGTTTTATTACAGAGGCCTTTGTTGACCGTGATGTAAGTAAATCTATTTGTATTAGTAATTTATCCTAGTGTGTTTACTTGTGATTGCCATCTTACCTTATTGCATCATCATGTGTTCTGCCATTCTGTTTGATAGATTGTACAGAACATGATTGGCCTTTCCGCTGAGGAGCTTGCAGCTGCTCTTTCTTCTGGTGGCCCAGCACAAGCCAATATAAGAAAAACTATGAAAGCATTTGAGCATTTCCTGGTGAACTTTGAGGTCATTCTTGCTCTCATATTATTGTACCTGTTTTCATTGTGAGTTTGTGACGTTTCTGCATTGGTAAAACCTTGCATTCTAATGGCAGGCACTCAGCAACCATACTAGTTGAGTACCATGTCCAAAAGTGAATACATAATCTTTCTTTATCCTAGTGGAACAGGAATAGACTACTGTGTTGAAGTAAAAGATTCTTCATTTTTCCTTGTTCAGATAACATAGGCAGGCATAGCGATAGACATTAGCCCATTGAAATTCAAAGAATGGTAATAAAAATAGCAGGCTATAGAATTTAGATGAATAATTTAGAGTATTTTTAAGAAACATTTTGCTGTTTAAGGAAAGTAATACCAGCACAGAGAACCTATTTGACATTTCATATTCTTGAAGCAGCCAAATTTGATGATATTATAGCTCGTAAATATTGAAGCTCATAAGCCCGACATGCTATTTTGATTATAAACCCTTGCAAACTCGCGTGGTTCATATTATTGCTACATCAATAACGTTTCATTACATGGAATTTTAGTTCAATTTTGTTTGTAGCATTCTGAAATATGAAATGTGTTTTGAGCTCTACTTCCCTTGATTGCAGGGCACAATCCTTATTGAGCTCAACAGAGATTCTTCTGTTCCTATTGTACGTGAGATGAATAAAGGTTGTTCAAGTTCGGATGCGTGGCAGCTGCTTCGGAGGGTGAAAACATTTTCTGGTCAGGGCTACATGCGGAGCCTGGATTTTATGGACACCACTCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015193