BGIOSGA015202

From RiceWiki
Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015202| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015202, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015202, complete gene.

LocusTag

OSJNBA0044M19.9

Ensembl Transcript ID

BGIOSGA015202-TA

Ensembl Protein ID

BGIOSGA015202-PA

Length

4605

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16566948..16571552

Sequence Coding Region

16571372..16571552,16570556..16570767,16568845..16569126,16568319..16568441,16567344..16567559
,16567158..16567194,16566948..16567066

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16566948..16571552 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16566948..16571552 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAAGCTGCCGTAGATGCTAGGAAAGAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACCTGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTGATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAARSPYFVPESEGIRAGESPAAALRRILASPGAHQAPCCFDALGARLIQRAGFPICFMGGFCVSAARLGLPDAGLISYGEMVDQGRLITEAVSLPVIGDGDNGYGNAMSIKRTVKGYINAGFAGIMLEDQVAPKACGHTEGRKVISREDAIMHIKAAVDARKESGSDIVIIARSDSRQAISIDEALWRVQAFADAGADVLFIDALASIEEMKAFCAVSPKVPKMANMLEGGGKTPILSPAELQEIGFSLVVYPLSLIGVSMLAMEDALIAIKSTGAPRPGSLPSFQEIKDTLGFNRYYKEEKQYATVQQAQPLSTNIVLRLKITEKSGTQKINEGIPAGILEKISKAIPGLAGVNLTEILQGADQSQKGKLLLDREDATGDRIQVSIE</aaseq>

Gene Sequence

<dnaseqindica>1..181#786..997#2427..2708#3112..3234#3994..4209#4359..4395#4487..4605#ATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTGCGCATCGCCTCGTTCGCTCTCCCTCACGCTCGCGCGCGCTCGTTTCTGTTCGTGGTTAAAACCTTCGTGCTGGGGGGTTTTAGTTTGGTGGATGCGCACTTGCTCCCTGGTCAGCACGCAATTATTGGATCCAATCACATTTAGAGCAGATTAGCTAGTATTAGCTAACAGCCGAGTAGGTGTTATGCAAAATTCCACTCATGAATCTTGCAATTTGCGAAACAATAATCATAAGCGAACTACAGTCCTGTTGCATCTTTAGAAGTAGATGTGAAGTCCACCCATGGAATAAGTTAATAACTATGTGGAAAGCACTCCAGATGTTCGGTATTGATCCAACGAAGGAGTACACAATGGCGTTTTAATGCATGAGAATGGAAGTGTCTTAACTTTACAAGACAATACGAGCACTGGTTGTTTGTTCTATGAACACATTGATTTACTCAGTGAAAATGGAACCAGTATGGAGTCTACTCAGTAGTTAGTCTTACTGTAATATATTTTGCATATCGAGCCAGTACTAGTTTCTCTAAAGGAAGGTTTTGGTATATTCTCAAGACAATTAATGCGTTGGAGACTTAATACTTGTCATTTGTTTCAGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTATGCTTCCTAACTCCTAAGTATCACCAAATGATCTTCTCATGGATTGGCTCTCTCCGTTGTCTTAACAATCTATGGTCATATTTGTAACATTTTTTTTATACATTAGACCTTTTGGTGAACATCCCTTCATCCTAAACTTATGAATCTCAATTAATTTGTTATATAAGGCTACAATTTCCTGTACTGACATTTGAGATCACTTTTAATGTTGAGAGCTCTACTTTCTCAGTTCCTTGCTTAATTTTTATGTATGAATATGTTATTCAATGTTGGGCTGTATAGTGTACAATTCTATAGGAATTTTACTGTCGTATAGCTATGGAAGATACCGTTTGGTGGCTAAGATTGGGACATCAGTTCCAAGGCACTGAATTATGAGAATTTGTTTAGTAGGAGCCTCCCTTTAGATAGGAAATCAAGAGCTTCAATAAGTACATAGTGGAGAGGTTGACACCAGATGCCTGATGTAGGGCGTGTTGTGGTTGAGCATTGCTTGTGGGATGTATTCTTGGGTTGTATTGGGGTTGTTTCATTGAGCCCTTCTTAGTACTAATATTTTCTTTCTTCTTAATGAGATGAAACACAACTCATGTGTTTTTGAGAAAAAAAAAAGAGAGCCACATAATAATTAATATGCATCATTGCACGTCACAATGGGTGTTTTTTTTTGACGCAAACGTCACAATGGGTGTTGCAAGGGCAAGAAAGTAAAGTTAAAGTATTCACTGTTTCTTTTGAAAATCCGGCCATAGCAGTGCTCCAACCTAACTATATTGATCTCTCCAGTGAGTGACACTTACTCCTATTTTTTTTTTTAAAAAAAAGAACTAGACCGGCAGGGGAATGACTGTCCCCACGGCTTTTCATTAAGAAGAAGCCACAATAAAACTGACTGAGAAAGCCACGAACCCTGCTCTGCTCCCCACATGTGGAGTCACCCACTATGGATTGGTTCTTGACACCTGTTTTGATGAGGGGCCAGCGAGTGACTTTTTTTAAGTAGGCCTGCAATTCGCTCCCTTGGGGAGTCGAACTTAGGGCCTAGAGGTGCTACTTGAGCACTGTAACTGCTAGGCTAGAGGTGCTATTTAAATATTTTAACTTTTATATATATTCGTATTGATCTGTCCTGTGATACTTAGTCCAAATTAAGCTATCATGTTAACATCACAGCCTGAGCACAAATTCACTAAGCTCAAATGTTCAATCTGTTGAGCACGACTATTGCATTATGATAAAAATGTTTCACCTACAGTAATTAAATTATACTTAGTTCTTTCACATATCTGTGCTATTCAAACTACTGTAGCTACTTTATTCATTCTAGCTTAATCCATTATTGATATATGTGCAGAAGACTTCCAAGATTGATATTTCTTTACCTTTTTAGTTTCCATGTTAATGATATGACACATGATTTTTGAAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAAGCTGCCGTAGATGCTAGGAAAGAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGTTAGATGCACTCTGTTCTTTTGCCTTTTCTAGATACTTGAAAATTTGAGATAACCATGTAAGAGTTTATAGCTATTCCAAGGTTCTTTGAATTTCATTAACAAAATAGTGGAATACTCTTTCTTGGATTGCACTCTATATTTTTTCTATTGAGCTGAAGTTCTGAACATGAACAGCACAACCATGGGTGTAAACCCACTTCTAATTGGCAAGTTCCATAGATTTTCGCAAATTTTTCAGTGTGCATAGTTGAAGATGTAACCCTAAGCTTTGTTATATCATAATCATTTATAATTACTGCTTTCAAATGTCCTCTTCTCTATTTGTCTCTGAGCTATTAGCCTGTTACTTTTCTCTAGCATTGAAGTGAGGAGAGTTTATAGCCCTGTATTTTGTTCTCCAGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGTTTGTTCATTATGTTTACAGCTCTTATCCTGGACACTTCTGAATGTCCTGCAAAATTACTTGCATGTCTATTTTGTTTGAGCAAGGGCGCATGGTTTTTTTTTTTAAAATTCCTGTTTGTTATTTATTCTGCCTGATTGATAATTATTTAGTTGTTTCAATCTTATTTCACTGCATTTTTTTAATCCTATGGTACCTCTGTGTACATGTGATCTTCCTCAATTAAGGCCCGGTTTAGTTCCCAAAATTTTTTGTTTTGGGGTGTCACATCTGATATACGGACACACATTTGAAGTATTAAACGTTGTCTAATAACAAAACAAATTACAGATTCCGCCAGGAAACTGCGAAACAAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCATTGCGTAATTAGGCTTAAAAGATTCGTCTCACAATTTACACGCCAATTGTGTAATTGGTTTTTTTTTGTCCACATTTAATACTCCATGCATGTGCCCAAACATTCGATGTGATGGGTGAAAAGTTGTTTTGGGAACTAAACAGGGCCTAAGTTTTGTTTGATGCCAATGTCTGCTACTGTATGGGGGAAAAACATCAGGGAGGAGCCTAACATCTCTCAATGCATGCACATATTCACGTGCCATTGTGCATGAGTACAAGACTAGTTACACTCGTTAGCTATTCAATTTGGTGTGGAATCACTATTTGTATTTCATAATACATGAATCTTTGATCTGCAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACCTGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGTAAGAACCAATCCTGCCTTCTCTCACTCTCACTCACTCTCTCTCTCTCATCATTCAGTGATTCATCACATCTTCAATTTTCTTCCAACTGATGTAGACTCCATTTTACAACTTCTTGTTTGCTTTCTTCCCCTTTTTTTCTGCAACAGGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGTTTGTAGTTCTATTCGCAAACCACATTTAAACGAGCAAGTGTGCAACCCATGTTTGATAATGGCCATATCTTACTATCGTCGTTTCACAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTGATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015202