BGIOSGA015217

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015217| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015217, complete gene.| tag = OsI_156...")
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Gene Name

BGIOSGA015217

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015217, complete gene.

LocusTag

OsI_15600

Ensembl Transcript ID

BGIOSGA015217-TA

Ensembl Protein ID

BGIOSGA015217-PA

Length

3488

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16048180..16051667

Sequence Coding Region

16051555..16051667,16049146..16049647,16048180..16048740

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16048180..16051667 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16048180..16051667 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCGCGCCGTCCCACACCGCCTCGCCGTCCTACTGCGGCGTCGCGCAGGGTGGGAGGAGGAGCAATGGGATGTCGCCGGTGGTGGCCATGGCCTCCACCATCAACAGGGTCAAGACTGCTAAGAAGCCCTATACTCCTCCACGTGAAGTTCATCTCCAAGTCAAGCATTCACTGCCACCCCAAAAGCGGGAGATATTCGATTCACTTCAACCTTGGGCCAAAGAGAACCTTTTGAACCTCCTGAAGCCAGTTGAGAAGTCGTGGCAGCCACAGGACTTCCTGCCAGACCCTTCTTCCGATGGGTTTTATGATGAAGTAAAAGAGCTGCGGGAGAGGGCTAAGGAGATCCCTGATGACTACTTTGTTTGCTTAGTTGGAGACATGGTTACTGAGGAAGCTCTTCCTACCTATCAAACAATGCTTAACACCCTTGATGGTGTCCGAGATGAAACTGGCGCAAGCCCAACCACCTGGGCTGTTTGGACAAGAGCATGGACTGCTGAAGAGAACAGGCATGGTGATCTTCTTAATAAGTACATGTACCTTACTGGACGTGTTGACATGAAACAAATTGAGAAGACAATACAATACCTGATTGGGTCTGGGATGGATCCAGGAACTGAGAATAATCCCTACTTGGGTTTCCTTTACACATCATTTCAAGAAAGAGCTACATTTATATCCCATGGTAATACTGCAAGGCACGCCAAGGAGTACGGGGACCTCAAGCTGGCTCAGATATGTGGAACAATAGCAGCTGATGAGAAGCGCCATGAGACAGCTTACACCAAGATAGTGGAAAAGCTCTTCGAGATTGATCCTGACTACACGGTTCTTGCATTTGCTGACATGATGAGGAAGAAGATCTCAATGCCTGCTCATCTGATGTATGATGGCAAGGACGACAACTTGTTCGAGCATTTCAGCGCGGTGGCACAGCGGCTGGGCGTCTACACTGCAAGAGACTATGCCGACATCCTGGAGTTCTTGGTCCAGAGGTGGAAAGTCGCAGATCTCACCGGGCTGTCTGGAGAAGGGAGAAGGGCTCAGGATTTCGTCTGCACTTTGGCGCCGAGAATCAGGCGGCTGGATGAAAGAGCCCAAGCAAGAGCTAAGCAAGCGCCTGTTATTCCTTTCAGCTGGGTTTATGACCGCAAAGTGCAGCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAFAPSHTASPSYCGVAQGGRRSNGMSPVVAMASTINRVKTAKKPYTPPREVHLQVKHSLPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSSDGFYDEVKELRERAKEIPDDYFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVWTRAWTAEENRHGDLLNKYMYLTGRVDMKQIEKTIQYLIGSGMDPGTENNPYLGFLYTSFQERATFISHGNTARHAKEYGDLKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDYTVLAFADMMRKKISMPAHLMYDGKDDNLFEHFSAVAQRLGVYTARDYADILEFLVQRWKVADLTGLSGEGRRAQDFVCTLAPRIRRLDERAQARAKQAPVIPFSWVYDRKVQL</aaseq>

Gene Sequence

<dnaseqindica>1..113#2021..2522#2928..3488#ATGGCGTTCGCGCCGTCCCACACCGCCTCGCCGTCCTACTGCGGCGTCGCGCAGGGTGGGAGGAGGAGCAATGGGATGTCGCCGGTGGTGGCCATGGCCTCCACCATCAACAGGTGACCGGATTGAACCCCCCCCCCTCCCGGATCCCCTCTATTCCCTCCTCCTCCCTCCCCGTCGCGGGCGTGCTGCACGCGTGATCTTGGTTTCGTAGGGTGGGTTCTTGCGCGCTTCGGGGTTCTTCTTGGTTCTTGGTTCTCTGGGGTTGGTGAGATTTGTGATCTGGCTGTGGATCAAGTCAAATCGTTGAGGTGGAAAAATGCATGTGTTTCGCGCTCGATATTTTTGCGTGATCCGTGGTGTGTTGTGGGGGATTCATCTCCCACCTCCTCCTCGAGATCCTGGGTTGGTTTGGGTTCTCTCTGTATCTGGGGATGCTTGATTCCAGATTTCCTGGCCTCTGATCCGACCCGAGGGTTTCCTCCCTGCTCGTGATCTGGATGGGTTCGTCCGTGATCCGCTCCGGATTTGATGATTTGGTTTCTGCATGTGCCACCTCAAGTGGACTATGTTGATGATTTTGCTGAAATTATTGCCTGAAATTGACCATGGATGATTCTTATGTTTCTGCATGTGCCACCTTAAGCTTTGGTGCGATCTTGCCCATTTAGATGTAAATTATTCCTGTGCAGTTGCTTCTAGCAATTAAAAACTTGTAGTTTAGGACGATTAGGGACTTGTTCGTTCAAAAATTCGGTCCATTCAATTTGTGTATCTTTGACGCTTTTAAACAAAATCGGTCTGTTGACTTGAAATTTTCCTGGTGAATGATGGCTATGTGATGGTGTTGGAACTCTTGAACTGGGTTCTGAATATTAATAACCTGTCAATATCCTCTGCGTGTAATTATTTCGTCAGGCTAATCCGCTGGTTAAATAGATAAGCTATGGAGAATTAGAGATGCATGTACTGTAGAAGTGTTGAGTTGAAAGTATTGCTTCTTATGGAACCCATCAACCAACTGAGATAGGTGAAATGGTAAAATTAAAGTGGGTTGGTGATCCAGAATTTTATTTTTTTTCTCCGTGCTTTTCGCTTAGGGTGGATGCGGGGAGAAAGCTGAAAACTACTCGAATAGCTGTTGAGATTTGAACATGTTCAAATCTGTTGATGGTGATAGACTCTGATTCTGAACATTTAAGGCCTGCTTTGCAACCACCTGTGTACTCCACTGCTGACAGTACTGCTTTAGGATTTGTGTAGCCTGTTTTTTTAGAGAGCACAGAAGAAGCAACTTCTCTATTCAATTTGAATTATGAATTTCAGATACTTTCATTTTCTGCTGTTTTTAGGCCTGTGCTGTAATTTTCTTCTACTTTACTAATAATGTAGAATTATCAACAAGAAAGTAACGATAGTGTAACGAAAGGTCAGAAAGAGGATCTGCGTCATTGCCTCCCATGATTTGATAACAGTTAAACATATGTGGTTCATGATTATATACCATGCCAATTATGGAGTGAATTTTGCATTACGTTTACTGTGTTTGTTTGGTTTATTAATCAATCAACACTGGATATTATCATGTAGAGCTCAGAGAACATGGTAGTTTCAAGCTTGTCAATGTACCTATCTTGGAAAATCTCGAAATCGTAGTTAGTACTAATGATATTACTTTTGTCCATCTAACCTGTTTTAGGCTTTTAGCTAGATCGAAAAATTATTTTTGATAAACACTGGTTTGATTAAACTGTCTATACAAACATCAGAAACCTTTCTTTTCACATAGTGTGAAAAACTAATTCATTGTGTTAGGTGTATTTTTTTTATTTTCTTTTCTTGGCCACTGTAAAAAAATTGCTCCAAGGACTGAAAGGATTCCCAGCCTAGAGCATTGGTGGCAGATGGTTTATTATGAGCTGGATACATCACTCTACCTTTCTATAAGCTTTATTTAAACTACTTTCATATCTACCGTATGATATTTCTTCTCCATTCTTCTAATTTACTTCATTTTTTGTAGGGTCAAGACTGCTAAGAAGCCCTATACTCCTCCACGTGAAGTTCATCTCCAAGTCAAGCATTCACTGCCACCCCAAAAGCGGGAGATATTCGATTCACTTCAACCTTGGGCCAAAGAGAACCTTTTGAACCTCCTGAAGCCAGTTGAGAAGTCGTGGCAGCCACAGGACTTCCTGCCAGACCCTTCTTCCGATGGGTTTTATGATGAAGTAAAAGAGCTGCGGGAGAGGGCTAAGGAGATCCCTGATGACTACTTTGTTTGCTTAGTTGGAGACATGGTTACTGAGGAAGCTCTTCCTACCTATCAAACAATGCTTAACACCCTTGATGGTGTCCGAGATGAAACTGGCGCAAGCCCAACCACCTGGGCTGTTTGGACAAGAGCATGGACTGCTGAAGAGAACAGGCATGGTGATCTTCTTAATAAGTACATGTACCTTACTGGACGTGTTGACATGAAACAAATTGAGAAGACAATACAATACCTGATTGGGTCTGGGATGGTAAGAGCTAATATCCATTTTAGGCATGATAATATCATTTTCCTTTGTTACTTCAGTTTATAATGCTATTGTGGATTATCAATAGCTATGTCTCCAATATTCTCAAAATAATATTTTAAGAACTGAACGCTATTCATTTTATTAAAGCATCGGACAACATAACCTTTCATGTACAGTTTTACTTCTCTAAAGCAAATAAAAACACTGACTGATATTTATGTGCCTACTTGATAAATTTCTTGCACCATGTCAGTCCATAGAAAATGTGCTTCATTTTTTGTTTTTGAAGTAAACATGGTTAGATTATTCATTGTCTTATAGAATCAACTGTGATATGGTTATTCATAAATGAATTTCATTGTTAGCCACGAATCTGATTTCACCTCTTGTACCTACCTTCTGCAGGATCCAGGAACTGAGAATAATCCCTACTTGGGTTTCCTTTACACATCATTTCAAGAAAGAGCTACATTTATATCCCATGGTAATACTGCAAGGCACGCCAAGGAGTACGGGGACCTCAAGCTGGCTCAGATATGTGGAACAATAGCAGCTGATGAGAAGCGCCATGAGACAGCTTACACCAAGATAGTGGAAAAGCTCTTCGAGATTGATCCTGACTACACGGTTCTTGCATTTGCTGACATGATGAGGAAGAAGATCTCAATGCCTGCTCATCTGATGTATGATGGCAAGGACGACAACTTGTTCGAGCATTTCAGCGCGGTGGCACAGCGGCTGGGCGTCTACACTGCAAGAGACTATGCCGACATCCTGGAGTTCTTGGTCCAGAGGTGGAAAGTCGCAGATCTCACCGGGCTGTCTGGAGAAGGGAGAAGGGCTCAGGATTTCGTCTGCACTTTGGCGCCGAGAATCAGGCGGCTGGATGAAAGAGCCCAAGCAAGAGCTAAGCAAGCGCCTGTTATTCCTTTCAGCTGGGTTTATGACCGCAAAGTGCAGCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015217