BGIOSGA015219

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015219| Description = | Definition = Oryza sativa Indica Group BGIOSGA015219, complete gene.| tag = | tid = BGIOSGA015219-TA| pid = BGIOS...")
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Gene Name

BGIOSGA015219

Description

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Definition

Oryza sativa Indica Group BGIOSGA015219, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA015219-TA

Ensembl Protein ID

BGIOSGA015219-PA

Length

2021

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16029655..16031675

Sequence Coding Region

16031606..16031675,16031235..16031406,16030713..16030809,16030240..16030631,16029655..16030168

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16029655..16031675 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16029655..16031675 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCAAGNACAGAGGTGGTATCAGCACTGTCACCTCCAGCAGGAGGAGGAGCCATGGCGGTGTCAGATCAAGGTGCACACGGTGCTGCAAGCTTCGGATGCTCTAAGCAGCACCAGGAGTGGAGCAGGTCGCATTTGGTCACCATGACAGGGCTGGTGGCATGTGCTGTTCTTGTAGTCCCTTCTGCTGATGCTGTGGATGCTCTCAAGACATGCACTTGCCTTCTCAAGGAATGCAGAATAGAGCTGGCCAAATGCATAGCAAACCCATCCTGCGCAGCGAACGTAGCATGCTTAAATACATGCAACAATCGCCCTGACGAGACTGAATGCCAGATCAAATGTGGAGATCTGTTTGAGAACACTGTGGTCGATGAGTTCAACGAGTGTGCTGTTTCGCGCAAGAAATGCGTCCCACAAAAGTCCGACGTTGGCGAGTTCCCAGTCCCTGATCCATCCGCCCTTGTCAAGAACTTCAACATGGCTGATTTCAACGGCAAGTGGTACATTTCAAGTGGCCTCAATCCCACTTTCGACACATTCGATTGCCAACTTCACGAGTTCCGTGTCGAGGGAGACAAACTTATAGCGAACTTGACATGGAGAATTCGCACCCCCGACTCCGGCTTCTTCACCAGATCAGCCATACAGCGGTTTGTGCAGGACCCAGCACAACCCGCGATCCTCTATAACCATGACAATGAGTTCCTGCACTATCAAGATGACTGGTACATTATCTCATCCAAAGTAGAGAACAAGGATGATGACTACATCTTTGTGTACTACCGTGGCAGAAATGATGCATGGGATGGATATGGAGGTGCTGTTCTGTACACCAGAAGCAAAGTTGTGCCTGAATCAATAGTACCTGAGCTAGAAAGGGCGGCAAAAAGCGTAGGTCGCGACTTCTCCACGTTCATCAGGACCGACAACACCTGCGGTCCCGAGCCACCTCTCGTGGAGAGAATAGAGAAGACCGTCGAGCAAGGAGAGAAGACCATCATCAGGGAAGTGCAGGAGATAGAGGGCGAGATCGAGGGAGAGGTGAAGGAGCTGGAGGAGGAGGAGGTCACATTGTTCAAGAGGTTGACAGATGGCCTCATGGAGGTGAAACAGGACTTGATGAACTTCTTTCAGGGCCTGAGCAAGGAGGAGATGGAGCTTTTGGATCAGATGAACATGGAAGCAACTGAGGTTGAGAAGGTCTTCAGCCGCGCCCTGCCAATAAGGAAACTAAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAXTEVVSALSPPAGGGAMAVSDQGAHGAASFGCSKQHQEWSRSHLVTMTGLVACAVLVVPSADAVDALKTCTCLLKECRIELAKCIANPSCAANVACLNTCNNRPDETECQIKCGDLFENTVVDEFNECAVSRKKCVPQKSDVGEFPVPDPSALVKNFNMADFNGKWYISSGLNPTFDTFDCQLHEFRVEGDKLIANLTWRIRTPDSGFFTRSAIQRFVQDPAQPAILYNHDNEFLHYQDDWYIISSKVENKDDDYIFVYYRGRNDAWDGYGGAVLYTRSKVVPESIVPELERAAKSVGRDFSTFIRTDNTCGPEPPLVERIEKTVEQGEKTIIREVQEIEGEIEGEVKELEEEEVTLFKRLTDGLMEVKQDLMNFFQGLSKEEMELLDQMNMEATEVEKVFSRALPIRKLR</aaseq>

Gene Sequence

<dnaseqindica>1..70#270..441#867..963#1045..1436#1508..2021#ATGGCCGCAAGNACAGAGGTGGTATCAGCACTGTCACCTCCAGCAGGAGGAGGAGCCATGGCGGTGTCAGGTACCACCGGTGCTNGCCCCCGAGGGCTTACCTATGGAGGAAGGGCGATCATCTTCCTCTCCATCATGCCAAAATCTCTGCTCGTTGTTCCGAGGTGATTGACCGAGTCCTCATTTTCTTGTGATTGCACACTCCCAATTTTGCTTTCTTATTTGACAGGAAAAAAAGGGGATTGGGTTTTGGATGATTTGTTTGATAGATCAAGGTGCACACGGTGCTGCAAGCTTCGGATGCTCTAAGCAGCACCAGGAGTGGAGCAGGTCGCATTTGGTCACCATGACAGGGCTGGTGGCATGTGCTGTTCTTGTAGTCCCTTCTGCTGATGCTGTGGATGCTCTCAAGACATGCACTTGCCTTCTCAAGGAATGCAGGTGAGTGGGATTTCCTTTTTTTTGTATTTGTTCCAAGCATGATTCCAAGCCGTGTGCATTCGCCTCGTCGAACATCGATACTGTAATTTTTTTAGAGGTTCTTTGTTTATACTGACCATTTTTGACAGTTCTGTCAATCCTCCATTTTAGGAAACATTACTTTGTTTAGCTTAAGTTGTTTCAAAAACTTTGTTTAGCTTAACTGAAGTCCAGCAACGCCACATGCCATTGTTCAAAAACAATGATACACCAGCATCTACTGAATCTGTGCAATTGTCAATACAGATACATTTGATCCTGTTTAAGGCAATACAGTTTTGTACAATGTTTAATCAATGACTGCCTATGCATACCATACAAGTGAGTTCTGCCGATCTTGTGTGTTCATATGTTTCTTATACCTAATATAATGGAATCAATTTCAGAATAGAGCTGGCCAAATGCATAGCAAACCCATCCTGCGCAGCGAACGTAGCATGCTTAAATACATGCAACAATCGCCCTGACGAGACTGAATGCCAGGTGGTTCCATTTCCCAGAAACCAATCAGTTCAGATCATTTCCTCAGAAGAATAACCTGTGCTGTATCTTGTCATATTGTAGATCAAATGTGGAGATCTGTTTGAGAACACTGTGGTCGATGAGTTCAACGAGTGTGCTGTTTCGCGCAAGAAATGCGTCCCACAAAAGTCCGACGTTGGCGAGTTCCCAGTCCCTGATCCATCCGCCCTTGTCAAGAACTTCAACATGGCTGATTTCAACGGCAAGTGGTACATTTCAAGTGGCCTCAATCCCACTTTCGACACATTCGATTGCCAACTTCACGAGTTCCGTGTCGAGGGAGACAAACTTATAGCGAACTTGACATGGAGAATTCGCACCCCCGACTCCGGCTTCTTCACCAGATCAGCCATACAGCGGTTTGTGCAGGACCCAGCACAACCCGCGATCCTCTATAACCATGACAATGAGTTCCTGCACTATCAAGATGACTGGTATGCCCCCTTAGATAGCATCTTCTGATGCTGTACTTCAGATTTTATTACTAAGATTTTCTGAACTGCAGGTACATTATCTCATCCAAAGTAGAGAACAAGGATGATGACTACATCTTTGTGTACTACCGTGGCAGAAATGATGCATGGGATGGATATGGAGGTGCTGTTCTGTACACCAGAAGCAAAGTTGTGCCTGAATCAATAGTACCTGAGCTAGAAAGGGCGGCAAAAAGCGTAGGTCGCGACTTCTCCACGTTCATCAGGACCGACAACACCTGCGGTCCCGAGCCACCTCTCGTGGAGAGAATAGAGAAGACCGTCGAGCAAGGAGAGAAGACCATCATCAGGGAAGTGCAGGAGATAGAGGGCGAGATCGAGGGAGAGGTGAAGGAGCTGGAGGAGGAGGAGGTCACATTGTTCAAGAGGTTGACAGATGGCCTCATGGAGGTGAAACAGGACTTGATGAACTTCTTTCAGGGCCTGAGCAAGGAGGAGATGGAGCTTTTGGATCAGATGAACATGGAAGCAACTGAGGTTGAGAAGGTCTTCAGCCGCGCCCTGCCAATAAGGAAACTAAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015219