BGIOSGA015220

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015220| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015220, complete gene.| tag = OS04G03...")
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Gene Name

BGIOSGA015220

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015220, complete gene.

LocusTag

OS04G0379400

Ensembl Transcript ID

BGIOSGA015220-TA

Ensembl Protein ID

BGIOSGA015220-PA

Length

3358

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16010812..16014169

Sequence Coding Region

16013934..16014169,16013774..16013852,16012955..16013023,16012468..16012567,16011597..16011829
,16010812..16011429

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16010812..16014169 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16010812..16014169 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCTCTCCGGCTCATCGCCGCGGTCGCGCCCACTCCGCCACCGCCACCACCACCGCGACCCCGACGAGCGCCGCCGTCCGCGGCGCGCTTGGCGAGCGGCGGCGTGGCCTTCGCCGTCGTGGCAGCCGTAGCCGCTGCCTCGCCGCCAGCGCTCGCCGCGCTGGTCGCCGAGCCGGCCAACGCGCTCTCGCTGCCCACCTGGGCCGTCCACATCTCCAGCGTCGCCGAGTGGGTGACGGCCATGGCGCTGGTTTGGGACTACGGGGAGAGGACGGGGCTCCAGGGTTGGAAAGGCCTCTCTTGGGGAATGGTTCCACTTCTTGGTGGAGCGATGTGCGCTTGCACGTGGCATTTCTTCTATAATTCGGAGTCTCTTGAAGTGCTTGTAGCGCTCCAAGGTGCTCTAACAGTGATTGGTAACATTACAATGTGCATAGCTGCATTTCGCATCTTCAAAGCATCCCAGGAAAGCTCAAAAATGGTGATGGTGAACCAAGTTCATGAATCATGGACTGGCCAGCCGGTGTCAATGACCAAATTTGCAGCAGCAATGACCAATGGTGCATTGCCAAGGTGCAGGAAGGTCAAGCATCGGAATGAAACCTCCACTCTGCCTAGATATGGATCGCATGAGTGGACTCAGGGAGCGAGACGTGTCGCGCATCAGGACCCTCCTGGACGGCATCGGACGGAGCAGCTCGCTAGCTCCAAGATTCTCTCCTTTCCAAAGTTGGGAGGCAGTGGCCCGTGCGCGGCCGGATGCGCCGCCGCCACAAGCCCCGTTGCCGGCGGGTGGGGCGGGGGGAGAACAAGGGGGGAGGGCGGTGTCGCGGGGAAGGTGGACGATGATGCCGCACCCGTCGGCCTCCGCCGCTTCATCGTCCGAACCTATCGCGGTCTTCCTCCTCTGTCGCGCCGTCTCCTCCGGCCGCCAGATCCAGCGGCGGCGGAGCTGGATCCAGCTGCGGGAGGGCCGGATCTGACTACGGCGGCACCGAAGACGAGGCCACGAGCCGCGCCGTCGCACGGCCTGCAAGGAGAGGCAACGGAGAGCGGGGGGAGGACGGACGACGACGGCGGTGGCGGGTGGAGGGCGGACGACGACGGAGGCGACTGGGGGAGGGCGGACGGAGGCGGTGGGAGTCCGGCGCCGAGCACGGGGAGCAGGGCGCGGGTGGGGCGGCGGCCACGCGGTGGGGGAGTGGGGAACAGCCCATGGTTAGGGTTTGGGGTATATGTGGTTGTTTTTCGGAAAAACCCCTTAGTTTTTTATGTTGACAGCGCTATCCTTAAAACGGAATTTTCTCTTCTTCATATCGTGTATTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPLRLIAAVAPTPPPPPPPRPRRAPPSAARLASGGVAFAVVAAVAAASPPALAALVAEPANALSLPTWAVHISSVAEWVTAMALVWDYGERTGLQGWKGLSWGMVPLLGGAMCACTWHFFYNSESLEVLVALQGALTVIGNITMCIAAFRIFKASQESSKMVMVNQVHESWTGQPVSMTKFAAAMTNGALPRCRKVKHRNETSTLPRYGSHEWTQGARRVAHQDPPGRHRTEQLASSKILSFPKLGGSGPCAAGCAAATSPVAGGWGGGRTRGEGGVAGKVDDDAAPVGLRRFIVRTYRGLPPLSRRLLRPPDPAAAELDPAAGGPDLTTAAPKTRPRAAPSHGLQGEATESGGRTDDDGGGGWRADDDGGDWGRADGGGGSPAPSTGSRARVGRRPRGGGVGNSPWLGFGVYVVVFRKNPLVFYVDSAILKTEFSLLHIVYL</aaseq>

Gene Sequence

<dnaseqindica>1..236#318..396#1147..1215#1603..1702#2341..2573#2741..3358#ATGGCGCCTCTCCGGCTCATCGCCGCGGTCGCGCCCACTCCGCCACCGCCACCACCACCGCGACCCCGACGAGCGCCGCCGTCCGCGGCGCGCTTGGCGAGCGGCGGCGTGGCCTTCGCCGTCGTGGCAGCCGTAGCCGCTGCCTCGCCGCCAGCGCTCGCCGCGCTGGTCGCCGAGCCGGCCAACGCGCTCTCGCTGCCCACCTGGGCCGTCCACATCTCCAGCGTCGCCGAGTGGTACAGTACCTACCTACCTAGCTCTTGCTTCCGCGGCTGCAAAAGATGAGGGGATTATCACCTATTCGGCATGGATTACAGGGTGACGGCCATGGCGCTGGTTTGGGACTACGGGGAGAGGACGGGGCTCCAGGGTTGGAAAGGCCTCTCTTGGGGAATGGTGAGTGTAAATTTGGATAAAATGATGATTTATTTGCTGATGAAATTTGTGTTGGATAATGTTAATTTCCGTACTCCCTCTGTCCCCTAATAAGAGGGATTTTGATATTTTGCTTGCACTGTTTGACCACTCGTCTTATTCAAAAAATTTGTACAAATATAAAAAAACGAAAAGTTGTGCTTAAGGTCCTTTGGATAATAAAGTAAGTCACAAATAAAATAAATAATAATTCCAAAATTTTTTGAATAAGACGAATGGTCAAACAGTGCAAGTAAAATGTCAAAATCCCTTATATTAGGGGACGGAGGGAGTACAACATAGTAGCTTCATGTACTCCTATGTATTAGTAGTAAGATTCAGAGATTGGGAGGAGAATGTCTCATATTTATGAGTATGTTTTTATCAGAAGAAATCTTGTGTTGTTTTCAGTGAATCTAATCTGCAAGTACCCCTCTTTACTTACGTGTGACTTCTATTATCTATACTGCTCCTATATAGTACAACCTCCGTCCCGATATATAGTACAACTTCTATTATCATCTAATAGCATAAAAATACTAATCATAATTTTTTTTCAAATAAGACGGACGGTCAAACGAAACCCACAACTGCACTTGTATTGGGACGGAGGTAGTAAGGTTTTTGCTGATGGTAGTTGCAGTTGTTCACAAGTTTTCGACTGAATTTTTAACAGCTTACTTTATGATTGTTGACTACCCAGATTTGCATTTTCTTTTCTTTGTATAATAGGTTCCACTTCTTGGTGGAGCGATGTGCGCTTGCACGTGGCATTTCTTCTATAATTCGGAGTCTCTTGAAGTAAGATATATCCCTCGAGTTGGAACACTAGTGCTTCCTTTTTTTCCGTTCATCAAAATTATCATCATTTTCTTCCCCGTGGTTTGTAACTGTTCACACTTGTCAAATATCACTTCATTACTTGGCCTATCCTGACATTTCAATTGGTCTAGTGCCTATTTGCCTTTAAATCAATGCACATGAAACACAGATGATTAGACAGTGGAACTGTTCTCCACAGTTCTTTTGTGCAAGTCGTATGCTTGCGATTTTTTTGTAGTATTATCGAGATACTCTCTTATTGTAAAAACATACAATAATATAATTCAACTAGTGTTTTTCATAATTCTTCTGCTCACGTTCTTTCTCTTCATGGTTCTTTTTTTTTTGTTTGAAAACTATCTGCAGGTGCTTGTAGCGCTCCAAGGTGCTCTAACAGTGATTGGTAACATTACAATGTGCATAGCTGCATTTCGCATCTTCAAAGCATCCCAGGAAAGCTCAAAAAGTTCATAGAGGTACCTGTATGCATATATACACTAATGTACTAGTAACTGATTGTGGTAAAATATACCATACTTCTGAAAACAGATTACTTAGAGTTGCAACATCTATCTATTAGGTGGAATCTTCTTGATAATGGCAGTTACACCTGACATGAAATGGCAAACGGCTGATGGCTTGCAGCTACTTCAGAAAGAGGTTTTTTTATCGGACCGAAAGAGCCATTTTGTTTGTATGTATCAATTGTACAAATGCCAGCTAAAGCCACCCTGAAATTTGTGTATTGACTCTGTTTTTTTTCTAGACAATGAGTGTATTTACTCAGATAAGAAGAAAAATTACCTCACCTGCTATAGCCTATGCCTCATCTCATCTTCAACTGTTTTGAACAACTGTTGTGCAAGCTTCTTCTGCTCATGATCATTTACCAAACCTGCTCCAAAAGGTGCCAAAGCACCTGTCCTTCACCTCGAGATGCTCTTGGCATGTGGCTAGCTTCATAATACTAACCCTGAACCAATATCACACACTCCCTGCTATTGCTGGATGAGGTATGTGTGTTCGTGTGTGTTTGTTCATGAATCATGATAACCTCTAGCTACTATAATATATGATTCACATGCTCATTGGCAACACTTGCAGTGGTGATGGTGAACCAAGTTCATGAATCATGGACTGGCCAGCCGGTGTCAATGACCAAATTTGCAGCAGCAATGACCAATGGTGCATTGCCAAGGTGCAGGAAGGTCAAGCATCGGAATGAAACCTCCACTCTGCCTAGATATGGATCGCATGAGTGGACTCAGGGAGCGAGACGTGTCGCGCATCAGGACCCTCCTGGACGGCATCGGACGGAGCAGCTCGCTAGCTCCAAGGTAAGCACAACACAAGTGTAGCTGATGATCTTGGGGTGCAGATAATTTGTGCCATTCTTTGTGTCTAGCTGCTTGCTGCTGTGTGTGTGAGCATGAGTGCAACTTTTGGCCAAAGCTGAGGCAGTGGCCCAAAGTGTCTTCTTTGCTCCTAGTTTTTCTCTCAAAAGATTCTCTCCTTTCCAAAGTTGGGAGGCAGTGGCCCGTGCGCGGCCGGATGCGCCGCCGCCACAAGCCCCGTTGCCGGCGGGTGGGGCGGGGGGAGAACAAGGGGGGAGGGCGGTGTCGCGGGGAAGGTGGACGATGATGCCGCACCCGTCGGCCTCCGCCGCTTCATCGTCCGAACCTATCGCGGTCTTCCTCCTCTGTCGCGCCGTCTCCTCCGGCCGCCAGATCCAGCGGCGGCGGAGCTGGATCCAGCTGCGGGAGGGCCGGATCTGACTACGGCGGCACCGAAGACGAGGCCACGAGCCGCGCCGTCGCACGGCCTGCAAGGAGAGGCAACGGAGAGCGGGGGGAGGACGGACGACGACGGCGGTGGCGGGTGGAGGGCGGACGACGACGGAGGCGACTGGGGGAGGGCGGACGGAGGCGGTGGGAGTCCGGCGCCGAGCACGGGGAGCAGGGCGCGGGTGGGGCGGCGGCCACGCGGTGGGGGAGTGGGGAACAGCCCATGGTTAGGGTTTGGGGTATATGTGGTTGTTTTTCGGAAAAACCCCTTAGTTTTTTATGTTGACAGCGCTATCCTTAAAACGGAATTTTCTCTTCTTCATATCGTGTATTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015220