Os12g0632700

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0632700| Description = Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37)| Version = NM_001073878.2 GI:297613582 GeneID:43...")
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Gene Name

Os12g0632700

Description

Similar to Malate dehydrogenase, glyoxysomal precursor (EC 1.1.1.37)

Version

NM_001073878.2 GI:297613582 GeneID:4352871

Length

4688 bp

Definition

Oryza sativa Japonica Group Os12g0632700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27321109..27325796

Sequence Coding Region

27321439..27321511,27322168..27322262,27322355..27322444,27322534..27322569,27323208..27323291
,27323445..27323534,27323633..27323947,27324507..27324722,27325660..27325731

Expression

GEO Profiles:Os12g0632700

Genome Context

<gbrowseImage1> name=NC_008405:27321109..27325796 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27321109..27325796 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacgcagcagcagcagcaaggcggatggagaggcttgcctcccacctccgcccgcccgcttctcagatggaggaatcacccctcctgaggggctccaattgccgggcaaaaggtgccgctccgggtttcaaggtcgccatcttgggagcgtctggtgggattggccagcctcttgcattgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactcccggtgtcacagctgacattagccacatgaacactggtgctgtggtgcgtggtttcttgggaaagccacagttggaaaatgcccttactggaatggatcttgtgatcattcctgctggtgttcctcgtaagcctgggatgacaagggatgatttgttcaacatcaatgccggaatcgtccggactctttgtgaaggaatcgcaaaatgctgccccaatgcaattgtgaatgtgatcagcaaccctgtcaattctactgttccgattgctgctgaggtttttaagaaagctgggacatatgaccctaagcgccttttgggggtgacgacacttgatgtagtgagagccaatacttttgtggcagaagttcttgggcttgaccccagagatgtaaatgtccctgtcattggtgggcatgcaggagtaacaatattaccactcctttcacaggtgaatcctccctgctcattcacctcagaagaaattagttatcttaccactcgcatacagaatggtgggacagaagtagtcgaggctaaagctggagcggggtctgcaaccctttcaatggcgtatgcagcttctaaatttgcagatgcttgcttgagaggattgcgtggcgacgctgggatagtggagtgctcttttgtagcttctcaggtgacagagctgcctttctttgcatccaaagtgcggttaggtcgctgtggcatcgaggagatcttatcacttggtccattgaatgaattcgaaagagctggactggagaaggctaagaaggagctggccgagagtatccaaaagggggtcgctttcatcaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MEDAAAAARRMERLASHLRPPASQMEESPLLRGSNCRAKGAAPG FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLG KPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVI SNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIG GHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAAS KFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERA GLEKAKKELAESIQKGVAFINK</aaseq>

Gene Sequence

<dnaseqindica>4286..4358#3535..3629#3353..3442#3228..3263#2506..2589#2263..2352#1850..2164#1075..1290#66..137#cgttcccgcgccaccaaaccaaaccaactcttcgtcgtcgcgccgcttccgttcttccggcggccatggaggacgcagcagcagcagcaaggcggatggagaggcttgcctcccacctccgcccgcccgcttctcaggtcagcaccccacacgccgcccagatccccatctctctctctcccccaccctctttttcttttccacccgatttaattcaggtttagtttagtttggtttgctgcgcgtttgcttttcgggaagctgcaagatgatcttgctcatctagtatccgaggttaccttcttcttgcaagcttggggattacggggagttgagattggggaggtggcgagtcaaccatggggatggctggacctaggttactactactactattcagttacttttagtttggatctccttcttgaattacctacgccgcggggtaccgatttcacagtgcttctgatcgaattatgttttagtttatcacttgcaatgtactactagtgtaaagctaccaactttactggacttggaggaggtcccgttagctagctttgggggaaccaaatctctggttttgctacttcccacagattctcaagtgaactgaaaattgacttacatttttttctgatgatatgctctctggacgacttgttagtttctgattgaaactttgaaccctgatactaggatcttacccttatagctatttgctttctactagtgatagtgagtagggaatgtgatcgacaattatgctactttgcaccttctctgcttagccgtaagttttcaggggagaacattttgaccagaaaccttgttagaacagcatttgttcaataaacagcaattgactctgccacttttgtagcgactacaaccatgctcttcctttattatgtatactttaaaacgatagttagccattgatctaggaagtttacaagcatacacggtatgcaaatatggccggaagataaaagcttacccttccatgttctctgctctctgtttataatctgttttatcctgcttaattttctctgtttggtgtatgtgaagatggaggaatcacccctcctgaggggctccaattgccgggcaaaaggtgccgctccgggtttcaaggtcgccatcttgggagcgtctggtgggattggccagcctcttgcattgctcatgaagatgaaccctcttgtttctgtgctccatctgtacgatgttgtcaacactcccggtgtcacagctgacattagccacatgaacactggtgctgtggtatgttccttgacattatgtttagtatccccctattcataattgaaataccacattctgtaaccgttgcattttgctactacttttatggtcagttgcaatttctataattttcagttgtatgtcttgagggagggtacatatgcttcatctatattttccttacataacatgtgaatcatccagaagacaatctagttctgacaaatttaatttttcaaaccattgattatccagaatgaaagaaacaagtaattccaatgaaacttgtctatctgatagtcatatcttaataacttaaaaggtactaagttggtgtctgatcattgagcggctactgttgatcaaaatacagatattatataatactgctagcaatacgtcgtagccttcatgcatatttaaagtattttaactattattagatttcagctttgtagtttccagatatcctttttttatcaccatgtggtattcctatagttattcatctgtttattgaaccgtaaaaggtatttcgatcattgtatttaattatgctaaggtctcaaatctacaggtgcgtggtttcttgggaaagccacagttggaaaatgcccttactggaatggatcttgtgatcattcctgctggtgttcctcgtaagcctgggatgacaagggatgatttgttcaacatcaatgccggaatcgtccggactctttgtgaaggaatcgcaaaatgctgccccaatgcaattgtgaatgtgatcagcaaccctgtcaattctactgttccgattgctgctgaggtttttaagaaagctgggacatatgaccctaagcgccttttgggggtgacgacacttgatgtagtgagagccaatacttttgtggtatgaacttcaacagagtttgctttgtagtatatcattgtactaactttacatggacagtttctcattttttttttttgtctttgttttgtttacaggcagaagttcttgggcttgaccccagagatgtaaatgtccctgtcattggtgggcatgcaggagtaacaatattaccactcctttcacaggttaggaataccttccattgttgcaaatctgaaatctgagccacatatgtaggacaaattagtttttctggatatagacaattagtattggatcaatgttaccctgtttattttttcaaaagattgatggaattttactactattccccctaggtgaatcctccctgctcattcacctcagaagaaattagttatcttaccactcgcatacagaatggtgggacagaagtagtcgaggtatgattttttctttatcatctaatgatgcatgtttagaattgtattcataaagaagaaagggaagttggtttcacagtccctgatatgtatcatgcataatggttgtagttgtttgacttgaaagttaataaatctggaaaagaatcaacatgctaattttgtttgaatataagtgaccacttatagcatggatactttcaatccttgtacatatgcatattagttaaatgaatttcatggtgttaacaacaaagtcaagtattaagtgcatgtcgaactttaactaaatatgccttgaatgtctgtttgcccatattgcatacatttcatgttgttggcagaaaactactagttcaatgcatgtttaagtgtcgaaatccccctttcttcatttatcaatataaaggcctcccatgttctagatttttctgcttacgtttgcttttgctaggtgaaagtttaacagtagtctgtctaacggtaaatgtttttctatggaggttacagagttgtttgttggctgaagtttaatgtgttgttccctattggcgattcctgtgtactgttggtttctcaatgtttatatgttgctaatactgagcattttaattccccccttcctattatccatgtaggctaaagctggagcggggtctgcaaccctttcaatggttggtttctgtcacatgcgtattagcgtatgaaggttagttcttttatcagaacaattaagatttaacatggacaatttttcttgtaggcgtatgcagcttctaaatttgcagatgcttgcttgagaggattgcgtggcgacgctgggatagtggagtgctcttttgtagcttctcaggtttcttttctcccttttatgctggttatatttgtcatttgtgtgaacatatatttctaatttgcaaattttgcttgcggtgggtattgaaggtgacagagctgcctttctttgcatccaaagtgcggttaggtcgctgtggcatcgaggagatcttatcacttggtccattgaatgaattcgaaaggtttgtatgcttttccagtatttggcatgcataacatgcactcatatttagtgctacatgctcttatatgcttttcaatgatgttgatcctaaatccccacactgtgtaattatcaagctatcttctagtagcgcacaacgcttatatcgccagctcataacagtctttaaaaccttcatgacttgattgccagatcagtagatactgactggaagtctgcctaatggtttctattggactgggctcaagtactattacttgcatttagtagctcatagcaaatactgacaagtcccccttttgaaagtgaaaaatactgctgaaaatatgaatgcataatcatggcagactgcggccgtataacagtgcttagaaagagtcctgaaagtagagatgccccactacagattgtatggcttcacattgcaatataaataatactattgccaagttatctcttcatatccatactgtagaactgcaggatatatgacccctccgacaagaacacgctgcgtctgaattgaaagcctctgcggcatatatatgacaatatatgatgctgcattaggtccacagccaattaagatttgatatatcctactgctgtattgacctgcattactgattatcttcatacatcgctgtcatgcagagctggactggagaaggctaagaaggagctggccgagagtatccaaaagggggtcgctttcatcaacaagtgaggccatcttggaatgccccaatttagttcaacatggaaatacacaggctgtgtctttgcttcctggggagtgggaagaacacttgtatcatcttgtctcaaatgtaaaagctgcctacacgatgtttatacagctgtagcagatgcaaaaacacaagtctgctaataaaagttgcttctgaataaaaaggaaccctgctctgatctctgccttgttaattatgtttccctggacagtgaacatctcatcaggtgtaatttgatcttgtgatggacttgcaaattatagaggaaaaagaaaagcggaactaaattttacttcctccgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0632700, RefSeq:Os12g0632700