BGIOSGA015229

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Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015229| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015229, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA015229

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015229, complete gene.

LocusTag

OSJNBB0006N15.13

Ensembl Transcript ID

BGIOSGA015229-TA

Ensembl Protein ID

BGIOSGA015229-PA

Length

4273

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15845447..15849719

Sequence Coding Region

15849710..15849719,15849485..15849594,15848537..15848653,15848331..15848434,15847348..15847414
,15846831..15846964,15846703..15846751,15846555..15846626,15846359..15846460
,15846200..15846267,15845880..15846032,15845447..15845504

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15845447..15849719 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15845447..15849719 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAATCCGGCAGCAGCAGCAGGGCCGTCGGGGGGAGCGAGGTCGTTCCTGCAGGCCGTGTCGACCGTCACCGAGGAGGCGCCGTCGCCGCTCCGCGTCGTGCAGATGGAGGGCCTGGCTGTCCTGAAGATCATTAAGCACTGTGAGGAGTTTGCACCTGCTCTAGTTACAGGCCAACTGCTTGGTTTGGATGTTGGCAGTGTTCTGGAAGTAACGAACTGTTTTCCTTTCCCAATGAGAGAAGATGATGAAGAGGCAGATGCAGATGGTGCAAATTATCAGCTTGAGATGATGAGGTGCTTGAGGGAGGTTAATGTTGACAATAACACTGTTGGATGGTATCAATCTTGCTTGCTTGGATCTTTTCAGACTGTGGAACTGATTGAAACGTTTATGAACTATCAGGAGAATATCCGGAGATGTGTGTGCATCGTTTATGACCCATCTAGGTCAAATCAGGGGGTTCTAGCTCTCAAGGCCTTGAAACTCACAGATTCATTCATGGATCTTTACCGTAACAATGGTTTAACTGGAGAGAAGTTAAGAGAGAAGAAATTGTCATGGGTTGATATTTTTGAGGAGATACCGATTAAAGTTTCCAACTCTGCACTTGTCAGTGCCTTCATGACGGAGCTGGAACCTGAATCACCTGTTTCACAGTGTGATTTTGACCGCCTTAAATTGTCAACTGCTCCATTCATGGAAAGGAACTTGGAATTTCTGATTGGCTGCATGGATGATCTTTCATCAGAGCAGAACAAGTTCCAATATTACTATCGCAATGTCTCAAGACAGCAGTCACAGCAGCAGGCATGGCTCCAAAAGAGAAGGCAAGAGAATATGGCAAGAAAAGCTGCTGGAGAGGAGCCATTGCCAGAAGAAGACCCATCCAATCCCATTTTCAAGCCGATTCCTGAGCCGTCACGTTTGGAGGGTTATCTTGTAACCAATCAGATCTCCAGTTACTGCAACCATATTAATGGGGTTGCTGGTCAGAATTTCAACAGGCTCTACTTAATGAAGGCCTTGCAGGAGGACTAG</cdnaseq>

Protein Sequence

<aaseq>MANPAAAAGPSGGARSFLQAVSTVTEEAPSPLRVVQMEGLAVLKIIKHCEEFAPALVTGQLLGLDVGSVLEVTNCFPFPMREDDEEADADGANYQLEMMRCLREVNVDNNTVGWYQSCLLGSFQTVELIETFMNYQENIRRCVCIVYDPSRSNQGVLALKALKLTDSFMDLYRNNGLTGEKLREKKLSWVDIFEEIPIKVSNSALVSAFMTELEPESPVSQCDFDRLKLSTAPFMERNLEFLIGCMDDLSSEQNKFQYYYRNVSRQQSQQQAWLQKRRQENMARKAAGEEPLPEEDPSNPIFKPIPEPSRLEGYLVTNQISSYCNHINGVAGQNFNRLYLMKALQED</aaseq>

Gene Sequence

<dnaseqindica>1..10#126..235#1067..1183#1286..1389#2306..2372#2756..2889#2969..3017#3094..3165#3260..3361#3453..3520#3688..3840#4216..4273#ATGGCGAATCGTAAGCGAGACGAAGAACCGCCCTACCCTCTCCCTCTCTTGTGTCCTGCTCCGCTTCCGACTCTGGGGGCGAATGGGTGGTTTGTTTAATTGGTTCGGTTTGGTTTGGTTTGCAGCGGCAGCAGCAGCAGGGCCGTCGGGGGGAGCGAGGTCGTTCCTGCAGGCCGTGTCGACCGTCACCGAGGAGGCGCCGTCGCCGCTCCGCGTCGTGCAGATGGAGGGCCTGGTGATTATTTTTCTTCTCCCCTCCCGTTTTGTCCCTTGGTAGAATTCGAAGCGCGTCCGCTATGCTAGCATGTTTGTTTTGGGCGACTTGCGCTTGGGATGAAGTAAGGATAAGCTCTTGATTTCGGGAGGATCTGTTTGTGTGATGAAACGCCCGCAGTGTGCGATTTCTCTTCACCCAAATGTGTTGTTTAGCTCTTTAGATCGAGGTAATTTCGGGGGGATCTGTTTGTGTGACGAAACGCCCGCAATGTGCGATTTCTCTTCACCCAAATGTGTTGTTTAGCTCTTTAGATCGAGGTAATTACATGCTTTGCCGTGTAATTAGATCGGGGTCCTTTGGCTCTGGAACTGGAGGGATTTGGTGAGGTTATTACGAATATAGTTGTCTTTTTTACAATGTTTTCTTCTACACATGATTTGAAAGTGATCGGAAGACTTCCTATCTTAATTAATTACATTGAATGACCTCCTTCGGTCATTCCGGCAAAAAAGAAAGTGATCATCTGCATTGTGATTGTTGAGAAGAAGTGTAGGAGAAACTAGGGAGAGCAGAGGATGGGAGAAAATTCTTGCTTGATTCGCAGCGCAATAGGAGCCTCCAAGAGTGCTCTAGTGGAGCACAACCATATTGCACGACACACATGTTGCTTTTAGTCATGTACTTATGTTGACCATACTCTACTAGATCAAATTTGCTGCACCTTTACATTGGATGATTTTCTGAGGGCCAGCTGCATTTTTCTTTTGCCCTGTGTTTGAATAGGTATGTTTAGGTATAGTACTCTTATATTTCCACTCACATATTTCTCTCTCTCTCTCAATCATGCAGGCTGTCCTGAAGATCATTAAGCACTGTGAGGAGTTTGCACCTGCTCTAGTTACAGGCCAACTGCTTGGTTTGGATGTTGGCAGTGTTCTGGAAGTAACGAACTGTTTTCCTTTCCCAGTGAGTATTTAACATCTATAACATATTTCTTTTAATATGACTTGAGTATTCTTGTGGTTGTTTAGTTTATAGATTAACAGCTACTTTAATATTTGACCACAGATGAGAGAAGATGATGAAGAGGCAGATGCAGATGGTGCAAATTATCAGCTTGAGATGATGAGGTGCTTGAGGGAGGTTAATGTTGACAATAACACTGTTGGATGGTATGATAAGACATTTCATTCAATACCTATTGCTGTTGTTCCATATGATAATTAACCTCTGCCATGTGCTTCTGCGAGCAGCCTTTGAGTTTACACGTGTTACAACTCTGTTTTTGTAGTCTTTGATCCTCTGCCTTTAATTTATATGTGCATAAATAGTTCATTCGTATTTCTTTGTTCTGACCGTTTGTTCATTATTATATTTTTGGAATGTTGCTAACATCTTTGGCTGTAGTTAATAATGCAGGCAAACTAAATTGAGATATGCTCATTTGTCAACATAGTTTAGTGATGCTGTTGAGTATGTGACACTGAAAAGTGAGAACAAAATAAATGTGGAATTTTGCCTCTATGCATACATGTATAGAAATGTTGTTTGTGTCATGTATTCACCTTGTCTCTGTTTAAAATCAATGGTGCTCTGCTTGTTTGCTTGGACTGATTATTTTATCTAATCCTCTTTTGGAAACACTTCATGAGAGTGTTAAATTTCTTATTGCATGAAGCAACCAAACATCATCAAGCTTCTGGTAGCAACCTTTAGTTATCGTGTATGTGGGTAACATTGACCTTAAAGTGGCTGGTTTTGTGCTTACTCGATGTATTTTCCAGTCTTTTGCAGTTGCATTAACGACATATTAACCTGTGTTGCATTCTAGCTGTTTCATGCCTCGTTCAAAATATTTGCTATATTTTTAACTCCAATAATGACTAATTATCCAACGTATTTCATCTTGAGCTTAAGTGATGTGTCCTATTATTTGTATTATTTATGTTGTGGTTTTAAGTTTTAACCTCCATTCTTGTTGTACTTGTTTAACAGATTTTGCACATACAACTATCATAATCATCCAACAAAGCTGTAGCCTGTTCTGCTTCATGTTTTGACCCTTTTTTTTCCCATGCCTGTGTACAGGTATCAATCTTGCTTGCTTGGATCTTTTCAGACTGTGGAACTGATTGAAACGTTTATGAACTATCAGGTATGCAAAAATAAATAAGGTGCAATTGATCAATCTTTTCATTGCTGTTGGGTTATCCTCTCCCAGCTTTGTTGACCTACTGCAGTAATAGTTTTAGGCCAACTTGCGCATTAATTAGCTCAAAATAGCTAGCACAGCATGAACAAACAAATAGGACAGCAAACAGTGCACCTAATTAGCTTCTCTAATTAGCATGTAACCTATTTTGACATGAATCAAGGTTAAGTCTCTGTATGCATTACAATATCTAACCTGTTTGTACATCCAATGTAGTATACGCAGCAGTACATGCATATCATATATCAAATATCTATGAGTTGGTCATAAGAGTTGCGTAATTTTCTGCGATGTTGCATGCAGAACATAACATTTGCATGTTACAGGAGAATATCCGGAGATGTGTGTGCATCGTTTATGACCCATCTAGGTCAAATCAGGGGGTTCTAGCTCTCAAGGCCTTGAAACTCACAGATTCATTCATGGATCTTTACCGTAACAATGGTTTAACTGGAGAGAAGTACGGTTTCTTTTATGTAACCCAGTCCTTCTAATAGTTTTTAAAGATTGCATATGCAAATGACTACATGTTTTTACAGGTTAAGAGAGAAGAAATTGTCATGGGTTGATATTTTTGAGGAGATACCGGTATGTACTTAGTTATCTTTCATGTCAATATGTACAATTTTTGTGTCCTGATGTATCCTGTCTTATTGTCTCATAGATTAAAGTTTCCAACTCTGCACTTGTCAGTGCCTTCATGACGGAGCTGGAACCTGAATCACCTGTTTCACAGGTTTAGAGTTAACTTGTGAATTTTTTTTATGTGGCATCTGTTGTCATCATCCTTTAGCAGCTACCTAGGATTTATATTTATCTTCTTGTTACAGTGTGATTTTGACCGCCTTAAATTGTCAACTGCTCCATTCATGGAAAGGAACTTGGAATTTCTGATTGGCTGCATGGATGATCTTTCATCAGAGCAGAACAAGGTTATTTTTTGAAATGAACTTTTGCATAAACTATCTGATGTTACTGTGACAAATATATTTTATATGACTGGGTGTTGTCCTTCTGGTGTAGTTCCAATATTACTATCGCAATGTCTCAAGACAGCAGTCACAGCAGCAGGCATGGCTCCAAAAGAGAAGGTCAAAACAACTGCTTGTCCATTGTGATATTGATCAGTTCATTAGCTCTTGGAATGTGCCAACTTTTTAAACAAGCGCACTCTTCCTCTCGGAAATAAGCAAAGCAGGTGCTGCTAAGAATATGGCAATTTACGTCTCATATTTTTTTTGCTACTGACATGCTGCAGGCAAGAGAATATGGCAAGAAAAGCTGCTGGAGAGGAGCCATTGCCAGAAGAAGACCCATCCAATCCCATTTTCAAGCCGATTCCTGAGCCGTCACGTTTGGAGGGTTATCTTGTAACCAATCAGATCTCCAGTTACTGCAACCATATTAATGGTATGGATTCTCTGCAAGTTTATGCCTATTCTCTAGGAGTTCCATAATGTCCTGTGTCTTTTCGTCAGGAATGAACCATTAGATGTAGAAATTTTACTGTGATTATTATGGTCGTACAGATGCATGTCTCATGATTGAACTAGTAACATCGCCAAAGTATTAAATATACAATGTTGTTAGCATGTAGTGGTGTAGTCTGATACACAAATGTTCCTTTTTGAATGATCCATTTAATTATGGCAATGGTTACGGTGAAGTAAATATGGCAAAATTTCTCTTCTGGCTCTTGTTTCCGTCGTAAAGCTTCAGATGTTTTTTTTTTCATTCCATGGCGCTTATTGCACCAGCCATATTGATATTTGCGTTACTACTGCAGGGTTGCTGGTCAGAATTTCAACAGGCTCTACTTAATGAAGGCCTTGCAGGAGGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015229

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA015229&oldid=64123"