BGIOSGA015233

From RiceWiki
Revision as of 04:10, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015233| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015233, complete gene.| tag = OS04G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015233

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015233, complete gene.

LocusTag

OS04G0376300

Ensembl Transcript ID

BGIOSGA015233-TA

Ensembl Protein ID

BGIOSGA015233-PA

Length

4663

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15817085..15821747

Sequence Coding Region

15821588..15821747,15819755..15819897,15819409..15819462,15818582..15818662,15818245..15818355
,15818133..15818165,15817689..15817823,15817512..15817605,15817202..15817284
,15817085..15817117

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15817085..15821747 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15817085..15821747 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCTCCGCGACCGCAGGGGCAGCAGCAGCAGTGGCCTCCCCGGCGGTGGCCCCGCGCGGCGCCGCCGTCGCGGCGGTGGCGCGGCGAGGGTTCGTCTCGTTCGGCGCGGCGGCGGCCGCGCGCTCGCGCGCGGTGCGGTCCGGCGGCTTCTCCGGCGTGCGGACCCATGTTGCAGCTGTTGAGCAAGCACTTGTGCAAGATGCTACAAAGTTGGAAGCTCCAGTTGTTATTGTGACCGGTGCCTCCAGGGGGATTGGAAAGGCGACTGCATTGGCTCTTGGAAAAGCTGGGTGCAAGGTCCTGGTGAACTATGCCCGATCCTCAAAAGAGGCTGAAGAAGTCTCCAAAGAGATCGAAGCATGTGGTGGTCAGGCTATTACCTTTGGGGGAGATGTTTCAAAAGAAGCCGATGTGGATTCTATGATGAAAGCAAACATCTTGTTATCAGGAATTACCCGAGACACATTATTAATGAGGATGAAGAAATCACAATGGCAAGACGTAATTGACCTGAATCTTACTGGTGTTTTCCTCTGTACACAAGCTGCTACAAAAATAATGATGAAGAAGAAAAAGGGAAAAATCATCAACATAGCATCAGTTGTTGGTCTTGTTGGTAATATTGGCCAAGCTAATTACAGTGCTGCCAAGGCTGGGGTTATTGGTTTGACGAAAACAGTAGCTAGGGAATATGCAAGCAGAAATATCAATGTGAATGCAATTGCACCTGGTTTCATTGCATCTGACATGACTGCTGAACTTGGAGAGGATCTTGAGAAGAAAATCTTGTCAACCATCCCATTAGGGAGATATGGCAAACCAGAGGAGGTTGCTGGCTTGGTTGAGTTTTTGGCTCTCAATCCTGCGGCCAACTACATCACGGGACAGGTTCTTACCATCGATGGAGGGATGGTGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MATSATAGAAAAVASPAVAPRGAAVAAVARRGFVSFGAAAAARSRAVRSGGFSGVRTHVAAVEQALVQDATKLEAPVVIVTGASRGIGKATALALGKAGCKVLVNYARSSKEAEEVSKEIEACGGQAITFGGDVSKEADVDSMMKANILLSGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKIMMKKKKGKIINIASVVGLVGNIGQANYSAAKAGVIGLTKTVAREYASRNINVNAIAPGFIASDMTAELGEDLEKKILSTIPLGRYGKPEEVAGLVEFLALNPAANYITGQVLTIDGGMVM</aaseq>

Gene Sequence

<dnaseqindica>1..160#1851..1993#2286..2339#3086..3166#3393..3503#3583..3615#3925..4059#4143..4236#4464..4546#4631..4663#ATGGCGACCTCCGCGACCGCAGGGGCAGCAGCAGCAGTGGCCTCCCCGGCGGTGGCCCCGCGCGGCGCCGCCGTCGCGGCGGTGGCGCGGCGAGGGTTCGTCTCGTTCGGCGCGGCGGCGGCCGCGCGCTCGCGCGCGGTGCGGTCCGGCGGCTTCTCCGGTAAGGCCGCACTTCCCTTTTTTCCCCCACCCCTCTCTTTGTCTCGCTCCAGCGGCGGGTGGACTTAGTCGTTGTTGTGCTGGGTTAGCTCGGGCATGGAGATCTGGGAACGCCGTGGCGAACGCTTCGCTGCTCGTGCTAGCCTAGGATCCGCACTTGCTGGGTGAAACGTGTGGGTTTTGGGGATATGCTCCGCCTGGTATAATATTATTTTTCAGTTATATTTTTAAAATTTCATGCTGGTATTTTACAAGTTGACATCAAATGGAGAGCTCTCTTAAATTTGGTGTAAAATGTAGGAGTACCCCTTATATTTATGGATCAACTTATGTTTGATGAGCCTATGTTTCTGTTAGTTCAAAATCATGTATTTATTTAGCATTACCATATCCTATTTGGCAATGAATTTCACTTTAGACAATCCAATCTTAAGAACATACTCTTGTATATGAAATTCATTGCCAAATAGGATATGGTAATGCTAAAAAAAAATACAAGAGTATGTTTTAGACCAGATTTTATTCTTTTGTTTATGTGCTTGGGATCTTAATTCGATGATAAACTACTTTGTAGTCCACTGGGAAGTAGTTCCATACATAGCTGAAGTGGCTTGCGGTCTGGTTTTGTTAGGGAAGTCAGCATCACTTTGTTTTTTCCCCAATATCACACGGTTTGCCTAGTCCTGTTATCAGCAAACTGAAATATCTAATACACTAATTGGTGCATTAAGAACACAATGTTTTATTTGGGGTTCATAAAATATTATTCTTTTGTATCTTTGCTTGCACCAGCAACCCAACAAGCAGCAATCTATTCTAGCATTATTCACGTGCCATGGAATGGAATTGATGATGACCATAGGTGTCAGTTCTTTGTTATAGGTATTGTGTCTTAGTGGAAAATTATGCAACAAATCAACAAAAGCTTAATCTTTTGTCAGAAGCTGTATGATGATTCCAAATGCTTCAGCATAAGAATGTAAATGTTGAACTGTACTTGTAAAGATTTTTTTCTGACAAAATCTACAGATCCCACAGTATTTGTCAAATGTCAATTGACAGTGGAAGTTGAGCTATTAACAATATTTGGTCCTAATTATCTACAGTGCAATAGACATCCAAATGTATTAAAAAGTGGAAACAGAACAGCGGAGCTATTTTTCTATTTTTGATAGCTTGGAATCATGCCCTTTTGGAGGTACTCTGGAACTACTGTATCATCAACATATATATGGCATCATCAAATTCAGGACCAGTAACATCTGTAATAGAGCACATAGGAAAAGTAGCTGTGCTTCACTACACTTCAATGATATGATATGCTTAGCCTGCAGATGCCACTTTGTAATCATCATTGATAAAGTTGAACATTCGATGTGAACTAAGTCTGATTGAAACAGACATTTGCATGGTATTTGTCAAGATGGAGTTTACTGTTTATTGCCTTGTTTTGGAAATAACAGATGTTCCTATGTATTTTTTTTTAAAAAAAATCTATATAGACTTGTGTCTTTGTTCTGTGTCCAGGATCATTTTTTTTAATTTAAAATTTTCACATCTTTTCATATGCTAAATGTATTCTTTTCAAGAGCTTTCTTCAGGAAAGCTGTGTTTTGAATTTATCCTCCTTTTCAAACTCATTCAAACAACCTACACTCTTGGTATCCAATGCTAAGCGATGCTATCTGCAGGCGTGCGGACCCATGTTGCAGCTGTTGAGCAAGCACTTGTGCAAGATGCTACAAAGTTGGAAGCTCCAGTTGTTATTGTGACCGGTGCCTCCAGGGGGATTGGAAAGGCGACTGCATTGGCTCTTGGAAAAGCTGGGTGCAAGGTGAGCATCACAACTAAAGTCTGAACAGCTTGTTCAACAGCTGATATGATTTGTTTGTGTACTTGTGTCGTGCGGTACTGCTCGTGTTGGAATTCTGGTTCTAGTTCTAGTATGTGTTGCTTTCCAATTTGTTGTCTTTGATATCTTATTAGAGGGATAGACATGTTGTGATGTAATTTTACACTTTTGCCTACCCGCTTGGCTTCTCAACAATGCAAAAGACCATTTCTCTTTTTCCTTATATTTTGTGTAATGATAAGATTAACCTCGGAGACTTGCCACTGCCTTTCAGGTCCTGGTGAACTATGCCCGATCCTCAAAAGAGGCTGAAGAAGTCTCCAAAGAGGTGAGCTTGTCGATTCCCAAATTTAGTATTTGTAGATAGACTTTGTTTGGTATTACTTGGTTACCTGTCACTTAATGTCAAATCTTAACATAAGGATAACCCTAAGGTGATTCTAAATCGTAACCATTGTGTGTGTGTGTGTGGACATTTTCACTATCTAATGCTATTTGTTAGTCATTTTAGTTTTACTACAGGCAATCAGTTTATGCTTTGGATAACTTTTTTTTCCTTAATTCTCATCATTGTTGGATTTCCTTAATTCTATTTTTCATTTTCCTGTCTTTTAGCCTCATGCAGGAATACATTAAAGTATTATCATTTACAAATCTTGCTGAATAATCTTGCCGTTTATGATAACGCAACTCCAAAACAATTGCACATTTCGGAAGTCAACCCAGAGCAATTTAAAATCTAATTGCATTCCTATCTTCATCTGTTTCATTGGCACATTGTAACATATTTTCAAAACTAGTAGATAGTAATAATAATGATAATAATTAGCAAGAAACAGTGAGATGAATCTCTACTGTGGTTGATTCAACCATATTTAACTACTTTTACTTATAAGTGTAGTTATTTTAGATCAATTTGAAAGTTCTCCATACCGCCATGGTCAAAAAGGGCAGTTCAAGCGAAATTTGGAGAGACATCTACCTACAAATATACAAATCATACTATAGAAAACTGCTTTTGGTTTCCCACACTATCCTTAGTTCCATCAGATAATTATAATGTTATTTTTCCAGATCGAAGCATGTGGTGGTCAGGCTATTACCTTTGGGGGAGATGTTTCAAAAGAAGCCGATGTGGATTCTATGATGAAAGCAGTAAGTGCAGTTTCTTTATGTAATAAAAATGCACTTTTAAATATACTTTTATATCAATTCTTCACTCTATGACTCGTTTATGATTACTTAATCTACCANGGCTCTTGATAAATGGGGAACAATTGATGTGCTGGTAAACATGCAGGTTGGGCCCCATTGTAGTTTCATTTCTTTACATTTTTTTTAGCTTCCTATCATGTTAATCAATTTGTCTGTAAATTAAAAGAACATCTTGTTATCAGGAATTACCCGAGACACATTATTAATGAGGATGAAGAAATCACAATGGCAAGACGTAATTGACCTGAATCTTACTGGTGTTTTCCTCTGTACACAAGTAAGTTTGTATTGTACTGTTTTTGGTTACTTGAAGTCTTGAAGAACATTATTCATCTTACCTGTATACATTCTTGCAGGCTGCTACAAAAATAATGATGAAGAAGAAAAAGGTAGTGTTTGGTTTGCATAGAATGCTTTTCTATTACTATACTGGGTGCTAACTGCTGCGTCTTCGTATTCATGGATTAACAATGGTCCCTTTTGGCGATTCTGATAATACACATGAAATCTTGAAAAATATCTTTATCATATCTTGAAAAATATCTTAATATTGCTTACAAGTTTAGTCAGGTTTCATAATAATAACTAATTTTATTCATTTTGTGGTCTGAATTTAAGAAGTTTTGTTAAAAAGAGCTTCTATTCATATCCATGTCACCATGAGTACTGATTTGCTTGTTTTTTGTGTTGAAATGCAGGGAAAAATCATCAACATAGCATCAGTTGTTGGTCTTGTTGGTAATATTGGCCAAGCTAATTACAGTGCTGCCAAGGCTGGGGTTATTGGTTTGACGAAAACAGTAGCTAGGGAATATGCAAGCAGAAATATCAATGTATGGCTTCATCTCTCCATTGTTAGCTCTCGTATAACTTTAGGGTAGCCCGACTTCTCAAACAACTCTGAATACTCATGCAGGTGAATGCAATTGCACCTGGTTTCATTGCATCTGACATGACTGCTGAACTTGGAGAGGATCTTGAGAAGAAAATCTTGTCAACCATCCCATTAGGTACGTGTGTTAAGCTGTACTCCTTGACTAAGTGGCATTGTTATCTTCTTTATATCATGCACGATTTCTATTTGCGCGAAACCCCCCTCTTTTGCTAAAAACATCAAAACAGCCTATGTGCTAATCTGTGTGAGATAACACTACATCCCTGCATAAGTGAGATAACGCCACATCCCCTGGGCAGTTCAATAATTTCAGTCAGTACCAATGGTTGATATGACTTGCAGGGAGATATGGCAAACCAGAGGAGGTTGCTGGCTTGGTTGAGTTTTTGGCTCTCAATCCTGCGGCCAACTACATCACGGGACAGGTGCGCTTGAATCCTAATTCACACCACATCCCTGCGTTCATTCATCATCGAACTAACCACTTGCTATTTGGCCATTTTACGCAGGTTCTTACCATCGATGGAGGGATGGTGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015233