Os12g0632800

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0632800| Description = Protein kinase-like domain containing protein| Version = NM_001073879.2 GI:297613584 GeneID:4352872| Length = 3391 b...")
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Gene Name

Os12g0632800

Description

Protein kinase-like domain containing protein

Version

NM_001073879.2 GI:297613584 GeneID:4352872

Length

3391 bp

Definition

Oryza sativa Japonica Group Os12g0632800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27335480..27338870

Sequence Coding Region

27335587..27338610

Expression

GEO Profiles:Os12g0632800

Genome Context

<gbrowseImage1> name=NC_008405:27335480..27338870 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27335480..27338870 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaccgccctcccttctcctccctcctctcctcctcctcctcggcctccatgccgccgccgccgccgtctccgaggtgtcggccctcatggccttcaagaacgccctcaccatccctcccaccgccgccgccttcttcgcccggtgggacgccgccgcggcttccccctgcaacttcaccggcgtcgactgcgccaattccggcggcggcggcgtcaccgccgtcgccgtggagggcttgggcgtggccgcaacgtccgtcccgttcgacgttctgtgcggctcgctgccgtcgctcgcgaagctctccctgccgtcgaacgcgctcgccggggggatcggcggcgtcgcggggtgcaccgccctcgaggtgctcgacctcgcgttcaatggcttctccggccacgtcccggacctctcgccgctgacgaggctgcagaggctcaacgtgtcgcagaacagcttcaccggcgccttcccatggcgcgcgctggcgtccatgccgggtctcaccgtgctcgccgccggcgacaatgggttcttcgagaagacggagacgttccccgacgagatcaccgcgctcaccaacctcaccgtgctctacctctccgcggccaacatcggcggcgtcatccctcccggcatcggcaacctcgccaagctcgtcgacctcgagctctccgacaacgcgctcaccggcgagataccgccggagatcaccaagctcaccaacctcctgcagctcgagctgtacaacaactcgctccacggcgagctcccggcggggttcgggaacctgacgaagctccagttcttcgacgcgtccatgaaccacctcaccggcagcctctccgagctccggtcgctcacccagctcgtgtcgctgcagctgttctacaatggcttcaccggcgacgtgccgccggagttcggcgagttcaaggagctcgtgaacctgtccctgtacaacaacaacctcaccggcgagctgccgcgggatctcggcagctgggcggagttcaacttcatcgacgtgtccaccaacgcgctgtccggcccgatcccgccgttcatgtgcaagcgcggcaagatgaccaggctgctcatgctggagaacaacttctccggccagattccggccacctacgcaaactgcacgacgctggtgaggttcagggtgagcaagaactccatgtccggcgacgtccccgacgggttgtgggcgctccccaacgtcgacatcattgacctcgccaacaaccagttcaccggggggatcggcgacggcatcgggagagccgccttgctgagcagcctcgacctggccgggaacaggttctccggcgcgatcccgccgtcgatcggcgacgccagcaacctcgagacaattgacatttcgtcgaacgggttgtcgggcaaaattccggcgagcatcgggaggctggcacgtctcggcagcttgaacattgctaggaatgggatcaccggggccatcccggcgagcatcggcgagtgctcgtcgcttagtacggtcaatttcaccgggaacaagctcgccggcgcgatcccgtcggagctggggaccctgccgcggcttaattctttggacttgtccgggaatgacctctccggtgccgtgccggcgagcctcgccgctctgaagctgagctccctgaacatgtccgacaacaagctcgtcgggcccgtgccggagccgctctccatcgcggcctacggcgagagcttcaaggggaaccccgggctgtgcgccaccaacggagtggacttcctccgccgctgctcgccgggatcaggaggccactccgcggccaccgcgcgcaccgtggtcacctgcctcctcgccggcctcgccgtagtgctcgcggcgctcggcgcggtgatgtacatcaagaagcggcggcgcgcggaggcggaggcggaggaggcggccggcggcaaggtgttcggcaagaaggggtcgtgggacctcaagtcgttcagggtcctggcgttcgacgagcacgaggtgatcgacggtgtccgcgacgagaacctcatcggcagcggcgggtccgggaacgtgtaccgcgtgaagctcgggagcggcgcggtggtcgcggtgaagcacatcacccggacacgcgcggcggcggcggcggcgaggagcacggcggcgtcggccgccatgctccgttcgccgtcggcggcgcggcgcacggcgtcggtgcggtgccgcgagttcgactcggaggtggggacgctgagctcgatccggcacgtgaacgtggtgaagctcctgtgcagcatcaccagcgacgacggcgcggcgagcctgctggtgtacgagcacctccccaatggcagcctctacgagcgcctgcacgaggggcaaaagctcggcggccgcggcggcctcgggtggccggagcgctacgacatcgccgtcggcgccgcccgtgggctggagtacctccaccacggctgcgaccgccccatcctccaccgtgacgtcaagtccagcaacatcctcctcgacgagtccttcaagccgcgcatcgccgacttcggcctcgccaagatcctcgacggcgccgccgccacgccggacaccaccagcgcgggcgtggtggccggcacgctcgggtacatggcgcccgagtactcctacacgtggaaggtgacggagaagagcgacgtgtacagcttcggcgtggtgctgcttgagctggtgacggggcggacggcgatcatggcggagtacggggagagtagggacatcgtggagtgggtgtctcgccggttagatagccgagacaaggtgatgtccctcctcgacgccagcatcggcgaggaatgggagaaggaggaggccgtcagggtgcttcgcgtcgccgtggtgtgcaccagcaggacgccgtcgatgaggccgtcgatgcgctccgtcgtgcagatgctcgaggcggcggcgatcggccgggagttcgccgtggtcacttcggtgaaggtcaaggtgatcccctag</cdnaseq>

Protein Sequence

<aaseq>MPPPSLLLPPLLLLLGLHAAAAAVSEVSALMAFKNALTIPPTAA AFFARWDAAAASPCNFTGVDCANSGGGGVTAVAVEGLGVAATSVPFDVLCGSLPSLAK LSLPSNALAGGIGGVAGCTALEVLDLAFNGFSGHVPDLSPLTRLQRLNVSQNSFTGAF PWRALASMPGLTVLAAGDNGFFEKTETFPDEITALTNLTVLYLSAANIGGVIPPGIGN LAKLVDLELSDNALTGEIPPEITKLTNLLQLELYNNSLHGELPAGFGNLTKLQFFDAS MNHLTGSLSELRSLTQLVSLQLFYNGFTGDVPPEFGEFKELVNLSLYNNNLTGELPRD LGSWAEFNFIDVSTNALSGPIPPFMCKRGKMTRLLMLENNFSGQIPATYANCTTLVRF RVSKNSMSGDVPDGLWALPNVDIIDLANNQFTGGIGDGIGRAALLSSLDLAGNRFSGA IPPSIGDASNLETIDISSNGLSGKIPASIGRLARLGSLNIARNGITGAIPASIGECSS LSTVNFTGNKLAGAIPSELGTLPRLNSLDLSGNDLSGAVPASLAALKLSSLNMSDNKL VGPVPEPLSIAAYGESFKGNPGLCATNGVDFLRRCSPGSGGHSAATARTVVTCLLAGL AVVLAALGAVMYIKKRRRAEAEAEEAAGGKVFGKKGSWDLKSFRVLAFDEHEVIDGVR DENLIGSGGSGNVYRVKLGSGAVVAVKHITRTRAAAAAARSTAASAAMLRSPSAARRT ASVRCREFDSEVGTLSSIRHVNVVKLLCSITSDDGAASLLVYEHLPNGSLYERLHEGQ KLGGRGGLGWPERYDIAVGAARGLEYLHHGCDRPILHRDVKSSNILLDESFKPRIADF GLAKILDGAAATPDTTSAGVVAGTLGYMAPEYSYTWKVTEKSDVYSFGVVLLELVTGR TAIMAEYGESRDIVEWVSRRLDSRDKVMSLLDASIGEEWEKEEAVRVLRVAVVCTSRT PSMRPSMRSVVQMLEAAAIGREFAVVTSVKVKVIP</aaseq>

Gene Sequence

<dnaseqindica>108..3131#aggctgctgacctacttactaccttaaagccaatcagtcagcttcacacactgacaccaaaggaagcatctttcttccttctcttcctcctcctcttcccggcagccatgccaccgccctcccttctcctccctcctctcctcctcctcctcggcctccatgccgccgccgccgccgtctccgaggtgtcggccctcatggccttcaagaacgccctcaccatccctcccaccgccgccgccttcttcgcccggtgggacgccgccgcggcttccccctgcaacttcaccggcgtcgactgcgccaattccggcggcggcggcgtcaccgccgtcgccgtggagggcttgggcgtggccgcaacgtccgtcccgttcgacgttctgtgcggctcgctgccgtcgctcgcgaagctctccctgccgtcgaacgcgctcgccggggggatcggcggcgtcgcggggtgcaccgccctcgaggtgctcgacctcgcgttcaatggcttctccggccacgtcccggacctctcgccgctgacgaggctgcagaggctcaacgtgtcgcagaacagcttcaccggcgccttcccatggcgcgcgctggcgtccatgccgggtctcaccgtgctcgccgccggcgacaatgggttcttcgagaagacggagacgttccccgacgagatcaccgcgctcaccaacctcaccgtgctctacctctccgcggccaacatcggcggcgtcatccctcccggcatcggcaacctcgccaagctcgtcgacctcgagctctccgacaacgcgctcaccggcgagataccgccggagatcaccaagctcaccaacctcctgcagctcgagctgtacaacaactcgctccacggcgagctcccggcggggttcgggaacctgacgaagctccagttcttcgacgcgtccatgaaccacctcaccggcagcctctccgagctccggtcgctcacccagctcgtgtcgctgcagctgttctacaatggcttcaccggcgacgtgccgccggagttcggcgagttcaaggagctcgtgaacctgtccctgtacaacaacaacctcaccggcgagctgccgcgggatctcggcagctgggcggagttcaacttcatcgacgtgtccaccaacgcgctgtccggcccgatcccgccgttcatgtgcaagcgcggcaagatgaccaggctgctcatgctggagaacaacttctccggccagattccggccacctacgcaaactgcacgacgctggtgaggttcagggtgagcaagaactccatgtccggcgacgtccccgacgggttgtgggcgctccccaacgtcgacatcattgacctcgccaacaaccagttcaccggggggatcggcgacggcatcgggagagccgccttgctgagcagcctcgacctggccgggaacaggttctccggcgcgatcccgccgtcgatcggcgacgccagcaacctcgagacaattgacatttcgtcgaacgggttgtcgggcaaaattccggcgagcatcgggaggctggcacgtctcggcagcttgaacattgctaggaatgggatcaccggggccatcccggcgagcatcggcgagtgctcgtcgcttagtacggtcaatttcaccgggaacaagctcgccggcgcgatcccgtcggagctggggaccctgccgcggcttaattctttggacttgtccgggaatgacctctccggtgccgtgccggcgagcctcgccgctctgaagctgagctccctgaacatgtccgacaacaagctcgtcgggcccgtgccggagccgctctccatcgcggcctacggcgagagcttcaaggggaaccccgggctgtgcgccaccaacggagtggacttcctccgccgctgctcgccgggatcaggaggccactccgcggccaccgcgcgcaccgtggtcacctgcctcctcgccggcctcgccgtagtgctcgcggcgctcggcgcggtgatgtacatcaagaagcggcggcgcgcggaggcggaggcggaggaggcggccggcggcaaggtgttcggcaagaaggggtcgtgggacctcaagtcgttcagggtcctggcgttcgacgagcacgaggtgatcgacggtgtccgcgacgagaacctcatcggcagcggcgggtccgggaacgtgtaccgcgtgaagctcgggagcggcgcggtggtcgcggtgaagcacatcacccggacacgcgcggcggcggcggcggcgaggagcacggcggcgtcggccgccatgctccgttcgccgtcggcggcgcggcgcacggcgtcggtgcggtgccgcgagttcgactcggaggtggggacgctgagctcgatccggcacgtgaacgtggtgaagctcctgtgcagcatcaccagcgacgacggcgcggcgagcctgctggtgtacgagcacctccccaatggcagcctctacgagcgcctgcacgaggggcaaaagctcggcggccgcggcggcctcgggtggccggagcgctacgacatcgccgtcggcgccgcccgtgggctggagtacctccaccacggctgcgaccgccccatcctccaccgtgacgtcaagtccagcaacatcctcctcgacgagtccttcaagccgcgcatcgccgacttcggcctcgccaagatcctcgacggcgccgccgccacgccggacaccaccagcgcgggcgtggtggccggcacgctcgggtacatggcgcccgagtactcctacacgtggaaggtgacggagaagagcgacgtgtacagcttcggcgtggtgctgcttgagctggtgacggggcggacggcgatcatggcggagtacggggagagtagggacatcgtggagtgggtgtctcgccggttagatagccgagacaaggtgatgtccctcctcgacgccagcatcggcgaggaatgggagaaggaggaggccgtcagggtgcttcgcgtcgccgtggtgtgcaccagcaggacgccgtcgatgaggccgtcgatgcgctccgtcgtgcagatgctcgaggcggcggcgatcggccgggagttcgccgtggtcacttcggtgaaggtcaaggtgatcccctaggactaggaggcatttggaccataagggggagtgaacaacgtgggtccttgttggtcgtccgatcagagaatcaacggctcagatcaagcgtgatcaaacacggataattcatcgtcgtggctcgatctcaaccgtacttcatcgatcggatggtttccaaagcttgtagttattacattagcaaatcagcttcagatgagatgaaattagcaaaatatatatgtagataggacaatcaatcatgaattatattccaggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0632800, RefSeq:Os12g0632800