BGIOSGA015238

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Revision as of 04:11, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015238| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015238, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA015238

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015238, complete gene.

LocusTag

OSJNBB0006N15.7

Ensembl Transcript ID

BGIOSGA015238-TA

Ensembl Protein ID

BGIOSGA015238-PA

Length

4562

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15773484..15778045

Sequence Coding Region

15777849..15778045,15777548..15777752,15776915..15777118,15776628..15776820,15776336..15776538
,15775573..15775829,15775389..15775484,15775284..15775317,15775087..15775161
,15774950..15775000,15774770..15774874,15774615..15774690,15774272..15774528
,15774118..15774164,15774015..15774036,15773874..15773942,15773729..15773770
,15773484..15773519

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15773484..15778045 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15773484..15778045 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCAGCAGCAGGAACCCGCCGGTGGCGGCGGCGGCGGCGGCGGCGTCAGAGTCGTCGCGAGGATCTGCCCCTACGCACCACCGCCACCCGACGCTGCCCTCAACTTCCAGGTCGCCGCCCTCAACGACCCCGCCCTAATCTCCTTCCTCCCCCGTCGCCCAACCGCATCCGCCGCCGCCGCCGCGGCCTCTGGCCGAGGAGATGGCCCCAAGGATAAGCAGCAGCAGCAGAAGTACAGGGTCGATGGCTGCTACCTCAGAGACGATCCCAACCACCGCGTCTTCCACAACGAGGTCAAGCCGCTCATTGATGGCAGAGGAGGAGGAGGAGGACGCGGCGGCGTCAAAGCCTGCGTCGTCTCCTGCGGTGATGCGGCTGCCAAACGTCACCTCTTCATGGGGTCTCCTGATCAACCTGGCTTGTTCACCATGGCAATGGCGCAACTCCTCGACTCCTCCAAAGCCATTGGTGCCGCTGTCACTGTCTCATCCTATCAGGTGCTCCAAGATACTCACATTCTCGACCTCTTGGAGCCCAAGAACCATGAGGTTCTCATACTAGAGGATGCCGATGGACAGACTCACCTCAAGGGCCTCTCCAGGGTTGGTGTCAAGTCAATCGAGGAGTTTTCGCAGCTTTGTTGTTGCGCTGCCAACCAGCAGAGGCACCATCCCGCTAAAGATTCCACTCAGTTACAGGATTGGGGACACCAAGGGCTGATTATCTACGTCTCTAGCATCGATCAGCAAGGCAAAGAATATGCTCTAGCTAAGATAAACTTCCTCAACCTGGCAGGCTATGTGGATCCCAAGCAGAAGAAGAATGAAGGTCTTGCTGTACCAACCGGTAACAAGTCTATGCATGCCTTGATGAATGTTGTCCAAGCACTGAACAGCAACCAGAAATTTGTACCATATAGACAAAGCAAAGTAACTCGTATTCTGCAAGACTCTTTATGCAAGAGCAAGACGAGCGGTAGCGTCCTGATAGCCTGTTTGGCTGAAGATTGCTGCCAAGATTCAGTTTCTACTCTTGGCTTGGCTTCTCGCTCAAGCCAAGTGGTCAATGAACAATACTACAGCTTATCCTTGAGTGCTAAAAAAACATCAAAGTCAAATATGAACTTACCTACTGATGCCAAAACCTTGTCAAGGACGTTTATGCACAAAACAATGTCAATGCAAGAGAAGAATGCCCGACCCGAATTCAATAATAGTGGTGTAAAAGGCGGACAAACTCCTACTGCTAATAGAAGGACTCAGCCAATCATTAGTTCAACGAAAAAATCTGGAAGCTCAATCTGTACTTCAATTAAGATGGAAAATTATGCTAAACCTAAAATAAGTGGAAGGAAATTATTTTGTCCAAGCAACAATTCATTGAAGGAGGAGAATGCTATGGATGTTGCTTCTACAGTGGTAACACAAACCAAGTCAGCAACAGTGAGAATACAAGCTGAGGAAGTACAACCATTAGTAGGCATGGAAATTCGAGCTGCATTACCAAATGAGGGAAGTTCTGAAACAGGAAACACCGGAGATGTTAAATCATCTGAAATGCAAAAGGTGGTACATTGCAGCACGCAAGAATTGCTACCAAGTACTATCCAAGAAGAGGACTATGCCTTGTCAAATATGGAACCGGAACATTCATGTACTACAGACATGGGATTGACCTGCTCTTCTATCACTGATAACCTTGTTGAGAAGACTCCTGCCAGCAATACCCAATCCTCCCCAAAGTTGAGTGACCGACTGAGAGAGATTTCAAACTCATTGAAGCTTCTTAGCACTCGGCCAGTGAGCGTGAGGGCAGAAAAGTGGGACATAGAATGTGTCCGGAGAATCAACACGATTGCACCAGAGCCAAAAACTCCTGAAGTGCATTTGAAATTTGAGCAAGCGGAAGATCCCAAGGATATACTTACGGCCCGCAGCACTGGGATTAAGAAATCTCTAGCTCAAGAGTGCTTGACTTTTCTCAACAGTGCTAATAAGGAGCAATTAAAAAGCTTAAAGGGAATCGGAGAAAAAAGGGCAAACTACATACTTGAGCTTCGTGAGGAGTCACCAGAGCTATTTAAAGAGATAAGTGATCTGAGAGACATCATCGGAATGAATTCAAAAGAGATCAAAAAGATGATGTCCGGGATTATCGACTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MEQQQEPAGGGGGGGGVRVVARICPYAPPPPDAALNFQVAALNDPALISFLPRRPTASAAAAAASGRGDGPKDKQQQQKYRVDGCYLRDDPNHRVFHNEVKPLIDGRGGGGGRGGVKACVVSCGDAAAKRHLFMGSPDQPGLFTMAMAQLLDSSKAIGAAVTVSSYQVLQDTHILDLLEPKNHEVLILEDADGQTHLKGLSRVGVKSIEEFSQLCCCAANQQRHHPAKDSTQLQDWGHQGLIIYVSSIDQQGKEYALAKINFLNLAGYVDPKQKKNEGLAVPTGNKSMHALMNVVQALNSNQKFVPYRQSKVTRILQDSLCKSKTSGSVLIACLAEDCCQDSVSTLGLASRSSQVVNEQYYSLSLSAKKTSKSNMNLPTDAKTLSRTFMHKTMSMQEKNARPEFNNSGVKGGQTPTANRRTQPIISSTKKSGSSICTSIKMENYAKPKISGRKLFCPSNNSLKEENAMDVASTVVTQTKSATVRIQAEEVQPLVGMEIRAALPNEGSSETGNTGDVKSSEMQKVVHCSTQELLPSTIQEEDYALSNMEPEHSCTTDMGLTCSSITDNLVEKTPASNTQSSPKLSDRLREISNSLKLLSTRPVSVRAEKWDIECVRRINTIAPEPKTPEVHLKFEQAEDPKDILTARSTGIKKSLAQECLTFLNSANKEQLKSLKGIGEKRANYILELREESPELFKEISDLRDIIGMNSKEIKKMMSGIIDS</aaseq>

Gene Sequence

<dnaseqindica>1..197#294..498#928..1131#1226..1418#1508..1710#2217..2473#2562..2657#2729..2762#2885..2959#3046..3096#3172..3276#3356..3431#3518..3774#3882..3928#4010..4031#4104..4172#4276..4317#4527..4562#ATGGAGCAGCAGCAGGAACCCGCCGGTGGCGGCGGCGGCGGCGGCGGCGTCAGAGTCGTCGCGAGGATCTGCCCCTACGCACCACCGCCACCCGACGCTGCCCTCAACTTCCAGGTCGCCGCCCTCAACGACCCCGCCCTAATCTCCTTCCTCCCCCGTCGCCCAACCGCATCCGCCGCCGCCGCCGCGGCCTCTGGGTAAGATAAGAACAAACGCCTTACTGTTTGGATTTTGGGGGATTTTTTTTTTGTTTTATCGCTGATGAAATTAACCACACGCGGTTGCGGCACCAGCCGAGGAGATGGCCCCAAGGATAAGCAGCAGCAGCAGAAGTACAGGGTCGATGGCTGCTACCTCAGAGACGATCCCAACCACCGCGTCTTCCACAACGAGGTCAAGCCGCTCATTGATGGCAGAGGAGGAGGAGGAGGACGCGGCGGCGTCAAAGCCTGCGTCGTCTCCTGCGGTGATGCGGCTGCCAAACGTCACCTCTTCATGGTATTATTATTATGGGTTACTAGCTAGCTGGATGAACTTGAGTTGCCAAGGAATTAAAAGAAGAGAGAAAAAAAATAATGCTATCTTTACCATTTCAAATATTAATCCAAGAATTCATGTTGCTGTTGGAGTTTGATATCTTCCCCCCTTAAATACTTTGTATAGAAATTCTCTTTGTTGTTGTTGTTTTCAGATCACAGTTTGATAGTTCAATATGTCTGGAGATAGTGGTTGCAGGTTTAGGCAGATTCACCACCACTTGAGTATTTTAAAAGAGTACAGATGCTAATTTTTCTTGCATTACATAAATACTGTATTTACATGCTACCGCAGCTGAGGCTGAGCCTGCCTTTCGTCAGAACCTAACACCATCTTGCATTCCTCAGTTGCAATTGTCACTGTTAGGCTACTCACTCTCCTCATCTGCAGGGGTCTCCTGATCAACCTGGCTTGTTCACCATGGCAATGGCGCAACTCCTCGACTCCTCCAAAGCCATTGGTGCCGCTGTCACTGTCTCATCCTATCAGGTGCTCCAAGATACTCACATTCTCGACCTCTTGGAGCCCAAGAACCATGAGGTTCTCATACTAGAGGATGCCGATGGACAGACTCACCTCAAGGGCCTCTCCAGGGTACAACACCACTCATCTTCCCCGAATTGTTTGTATGCCTATTAAATCATAGCAAAATTCATTTAGTATTAACCGGATCCATCATATTTTACAGGTTGGTGTCAAGTCAATCGAGGAGTTTTCGCAGCTTTGTTGTTGCGCTGCCAACCAGCAGAGGCACCATCCCGCTAAAGATTCCACTCAGTTACAGGATTGGGGACACCAAGGGCTGATTATCTACGTCTCTAGCATCGATCAGCAAGGCAAAGAATATGCTCTAGCTAAGATAAACTTCCTCAACCTGGCAGGTCTGTTCTCTTTTCTGCACCCCAACCTTCTAGCACCTCATTGGTATAGTGTGTTTCATAAATTTTGTACTGTATATTTTGATCATCAGGCTATGTGGATCCCAAGCAGAAGAAGAATGAAGGTCTTGCTGTACCAACCGGTAACAAGTCTATGCATGCCTTGATGAATGTTGTCCAAGCACTGAACAGCAACCAGAAATTTGTACCATATAGACAAAGCAAAGTAACTCGTATTCTGCAAGACTCTTTATGCAAGAGCAAGACGAGCGGTAGCGTCCTGATAGCCTGTTTGGTAAGCTACTTAACAGCTAACACTTTCCTTTTGTATAGGGCTGCACCAAAGAAAATAGTTATCAAACTAATTTGACTCTTACCCATGTAAGTTCCGCAAGTCTATTTACCTGTGAAATGCAAATTTTAGCATTTGATCACGGTACCTGTCGGTGATTAGGATTTGATCAATCTATGTGCATGCTATATGTTCATGTTGCTGATAAAGTAGTTTAGCATAAAACAGAACCTTCATGCCTGATAGTACTGTTCCTCATTAAGTCACTAAACTAGTACTACCTTTTAGTCCAAGGATATGTCGGTGTGATAATTCGATCCAGTTCTCATTTGCCATATGTTACAAATTGTTATACAAAATATGTACTAGATCATCGCTCCAGCTACAGTTAGCTTTGACTGGTTGTTACATATTTGCATAAGTACCATAGCTTTCCTGTTTGAACTGATACACAATAGGTGTTACTCTCCCAATCTAAATATATGTTTCCTTGTTCTTGTTTGTCGTAGGCTGAAGATTGCTGCCAAGATTCAGTTTCTACTCTTGGCTTGGCTTCTCGCTCAAGCCAAGTGGTCAATGAACAATACTACAGCTTATCCTTGAGTGCTAAAAAAACATCAAAGTCAAATATGAACTTACCTACTGATGCCAAAACCTTGTCAAGGACGTTTATGCACAAAACAATGTCAATGCAAGAGAAGAATGCCCGACCCGAATTCAATAATAGTGGTGTAAAAGGCGGACAAACTCCTACTGCTAATAGAAGGTCTTAGGAATTTAATATGTGAAGTAAAAGATTTTGAGCTTGGTATTTCACTACAAAGTGTAGCTAATTGTGGTTTTATTTCACACAGGACTCAGCCAATCATTAGTTCAACGAAAAAATCTGGAAGCTCAATCTGTACTTCAATTAAGATGGAAAATTATGCTAAACCTAAAATAAGTGGAAGGTACTCTTGTGAAAATAGATCTATCATTATTTTTTTTTCTAAACCAGCTTAAATTGTTTTTTTGTCATCAGGAAATTATTTTGTCCAAGCAACAATTCATTGAAGGTACAAAACTGACCATCTTAATTGTTATACTCTATTGTGGTTTATCAGACAAGTAACACATGGGCATGAAATTGCTTTTATCTTCTAACTGACTAATCAATTTCAACTTTTGAACTATTTAGGAGGAGAATGCTATGGATGTTGCTTCTACAGTGGTAACACAAACCAAGTCAGCAACAGTGAGAATACAAGCTGAGGTTAGTATAACAAGCACCCTACTATGCATTTTTGGTGATTATCAGTTGAGTTATTTTATCTTGGACCTCCTTGCATCATTGTACAGGAAGTACAACCATTAGTAGGCATGGAAATTCGAGCTGCATTACCAAATGAGGTACACTATTATGGTTTCCTTTCAGCCATGTTCCAAAATGAATACCTATTGATACAAATTTGGAGCAAAATGCAGGGAAGTTCTGAAACAGGAAACACCGGAGATGTTAAATCATCTGAAATGCAAAAGGTGGTACATTGCAGCACGCAAGAATTGCTACCAAGTACTATCCAAGAAGAGGTATCTCTTTGCAAGGAATACATCATTATCTGCTTGCAGTTCTGTATTAAATACGTAGTGCCCCTGTCCCTTTGTTCAGGACTATGCCTTGTCAAATATGGAACCGGAACATTCATGTACTACAGACATGGGATTGACCTGCTCTTCTATCACTGGTATAGCATCACTCTTATTATTTGTTGCCAAGTTCATTACGTGAATGGAAAGTATGATCACATTATTACCTGACTGGCACTCCCAGATAACCTTGTTGAGAAGACTCCTGCCAGCAATACCCAATCCTCCCCAAAGTTGAGTGACCGACTGAGAGAGATTTCAAACTCATTGAAGCTTCTTAGCACTCGGCCAGTGAGCGTGAGGGCAGAAAAGTGGGACATAGAATGTGTCCGGAGAATCAACACGATTGCACCAGAGCCAAAAACTCCTGAAGTGCATTTGAAATTTGAGCAAGCGGAAGATCCCAAGGATATACTTACGGCCCGCAGCACTGGGATTAAGGTTAACCTGTTTTTAACTCAGTAACTCATTTTATTCGCTTAATGTGTTTGTACCTTCTTATAATAGTCTTGCCTGATGAATTCCCTCTTGTTTTTTCTGCCCCACAGAAATCTCTAGCTCAAGAGTGCTTGACTTTTCTCAACAGTGCTAATAAGTGAGTTTGGCATTATCTTTACAACCGACTTCACACTACTTCTGCATTTCTAATGCATGTTTGTTTGTGTGTCCATTGCAGGGAGCAATTAAAAAGCTTAAAGGTTTGCTCTGAATCATATCGTGGCAGCCCAGATTTCTTCTTTCTTACAATTAACCCACTGATACATGTGTAGGGAATCGGAGAAAAAAGGGCAAACTACATACTTGAGCTTCGTGAGGAGTCACCAGAGCTATTTAAAGAGGTGAGCACTCAAGATCAACAAGGGATCAGTAGGCGTTAGACCCAAGCAACCAGAAGTTAATACATGACAATTCAACTCAGAGCTAATTCCTTTGCTTTCGCAGATAAGTGATCTGAGAGACATCATCGGAATGAATTCAAAAGAGGTACTGGAGAATCTGATTGCAATGTGTACATTTATCTACTTTCATCACTGGAAGATGGTTTTAATTAGTTTTCACAAACATTTCACTGGATTACACTGTCACTAGAGATATTCCTTAATAGTATTGTAGTATTAGACTCCAGCTGCTTCATGCAAACTACATGGGTTTTGGGTGTACTAAAATTACCACTGCTTTGTTATCTTCACCAGATCAAAAAGATGATGTCCGGGATTATCGACTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015238