BGIOSGA015240

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Revision as of 04:11, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015240| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015240, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA015240

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015240, complete gene.

LocusTag

OSIGBA0140A01.11

Ensembl Transcript ID

BGIOSGA015240-TA

Ensembl Protein ID

BGIOSGA015240-PA

Length

4555

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15688886..15693440

Sequence Coding Region

15692601..15693440,15690388..15691320,15688886..15689134

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15688886..15693440 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15688886..15693440 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGGCAGCGGCGGCCGAGCTCACCCTCCTCCCCCTCGTCGGTGCGGACGCGCGGGAGGAGCCCGATGTCGCCGTCAATGCCGCAGCCGCTGCCGCTGCCGTCGCCGCCGTCGAGCCCCCGTTCTGGCGCCACCACCACCACCACCACCTCGGTGCGGGCGCGTCCGAGACCACCGACGGCGCCGCCCGACGCCCCCTGGCTCGCCCTCTCCGGCGGTGGCGCCGGGTCATCAGACGTCGCCGGGAGCAGCAGCGGCAGCGGCAGCAACGTCGACGAGACCCTCGCCGCGATGAGGGACGCCGCCTGGGCAAGATTCTACGCGGTCATGGGGAAGGGGAAGGGGAAGGCCGGGGAGCGCGGGAGCTTCTCGTTCCCCGACCTCGGGGCGCCGCACGACGTCGTCGACGCGGCGGCGGTGGTCGACCACTTCGCCACCGTGGAGGCGGAGAGGAGGGCGGGGGCGAGGGCCCAGTTCCTGGACGCGACGATGGAGGCGACGGCGAGCGCGCGGCTGGGGAGGGTCAAGAGGGAGCTCCTCGTCGACCGGAGGGTGCTCGACCTCGCCGGGCTGGAGCGGTGGCTGCGGCGCGGCGAGGCCGTCGCGGAGCTCGCGTGGTTCCCGGAGCTCTGCGCCGGCGAGGGCGGCGAGCCGGTGCCCCCGCTCGAGCTCTTCGAGTCCGCGTTCCGGGCGCTGCAGGCGGCGCGCTCCGACGAGCTCCACCGCGGCGCCGGTTTCAGGAAGCGCTGGGTTGGCCCGGCCGCCGTGCCGGAGTTCTTCCTCTGCCCTATCTCCAACAAGGTCATGGTGAATCCAGTCGTCATCTCCTCTGGAAAGACTGTTGAGGTTTTAGCATTGGAGAAATGGTGGAGTGAAAATAGACGCCTCTGTCCAGTAACTGATGAGATTCTCGACAACAGCATATTCATCCCCAATATCCTCATTATGCTGTGCACAGCACTATGGCGTACAAGAAACGGCATTACAGATGTGACAACAATTGCAGAACCACCAAAGATTTCTTCTGAGGAGGAAGCCCTGTTCAGGGAAATCAACCTCTTGGCACTTTCCCCTAGCTTGTTTGACAAAACATTTGATGCCATATTACGCCTACATGAACTCATCAGCAATGCGCAGTCCTCGCTCCTGCATCTGCTTGGCCAAAGCCCAGGGATGATTGCAAAACTTGCATGCCTCTTGCCAGAGACATGCCTGGACCCTGATCCCGGATTGGACGACATTATCCTCAAGATCATTGCGAAGACAGCTTCCTACAACCCCAATAAGGTGATATTAGGAGATGATCAATATGCCATACCTGTGCTGATTGCAAGGGCATTGCTAGGGCCTGTGGACACAAGAGTCAAGAGTGCTCAAATCCTTGGGTTACTGGCTGACAACTACTACAACAAGATCAAGATCGGTGAACTTGGAGGCTTCGCTGCGCTGATGGAGCTGCTGCTCTTGGTAGGAGACAGAGAAGTCAAGAGGACGGTGGCGATGGCGATCGCCAGTCTTTGCGAGGCCCAGGAGAACTGGAGCAGATTTGTCAGAGAGGGAGTAGCAGATGCTGCTATATCCTTGTTGCGCGACGACAACCTAGTGGATGAAGCCCGCAGCATCTTCTTGAAGGCTACTGGTTTTGAGCTGGCCATGACACAGGTTCTGGATAAGCTGATGTCATTTGGCGATGATGCCAACTGCTTAAAGATGGTTGAGAGCATCTGGAATACCTTCATCCGGACGAAATTAAGACGAAGGCGCCCCAACCTTAAGCTTGATCAATTCAAGCCATGGCTGAAGGCTGAAGCTTTCCTGGGGAAGTACTTGCGCGCCCGCAGCTGCCGGCCGTTGATGACCAGCTTCACCAGGTGTTCCCCGCCGAGCACCGCGGCCGCCGTCGCCGCGTGGCGGAACACGATCCTCCCGTACGTCGGCGGCTCGCCGGCCGGCGTCCTCTCCATCATCACCTTCTCCAAGCAGTCGCCCCACCTCCTGCAGATGATGTTTGCAGGTTAG</cdnaseq>

Protein Sequence

<aaseq>MDRQRRPSSPSSPSSVRTRGRSPMSPSMPQPLPLPSPPSSPRSGATTTTTTSVRARPRPPTAPPDAPWLALSGGGAGSSDVAGSSSGSGSNVDETLAAMRDAAWARFYAVMGKGKGKAGERGSFSFPDLGAPHDVVDAAAVVDHFATVEAERRAGARAQFLDATMEATASARLGRVKRELLVDRRVLDLAGLERWLRRGEAVAELAWFPELCAGEGGEPVPPLELFESAFRALQAARSDELHRGAGFRKRWVGPAAVPEFFLCPISNKVMVNPVVISSGKTVEVLALEKWWSENRRLCPVTDEILDNSIFIPNILIMLCTALWRTRNGITDVTTIAEPPKISSEEEALFREINLLALSPSLFDKTFDAILRLHELISNAQSSLLHLLGQSPGMIAKLACLLPETCLDPDPGLDDIILKIIAKTASYNPNKVILGDDQYAIPVLIARALLGPVDTRVKSAQILGLLADNYYNKIKIGELGGFAALMELLLLVGDREVKRTVAMAIASLCEAQENWSRFVREGVADAAISLLRDDNLVDEARSIFLKATGFELAMTQVLDKLMSFGDDANCLKMVESIWNTFIRTKLRRRRPNLKLDQFKPWLKAEAFLGKYLRARSCRPLMTSFTRCSPPSTAAAVAAWRNTILPYVGGSPAGVLSIITFSKQSPHLLQMMFAG</aaseq>

Gene Sequence

<dnaseqindica>1..840#2121..3053#4307..4555#ATGGATCGGCAGCGGCGGCCGAGCTCACCCTCCTCCCCCTCGTCGGTGCGGACGCGCGGGAGGAGCCCGATGTCGCCGTCAATGCCGCAGCCGCTGCCGCTGCCGTCGCCGCCGTCGAGCCCCCGTTCTGGCGCCACCACCACCACCACCACCTCGGTGCGGGCGCGTCCGAGACCACCGACGGCGCCGCCCGACGCCCCCTGGCTCGCCCTCTCCGGCGGTGGCGCCGGGTCATCAGACGTCGCCGGGAGCAGCAGCGGCAGCGGCAGCAACGTCGACGAGACCCTCGCCGCGATGAGGGACGCCGCCTGGGCAAGATTCTACGCGGTCATGGGGAAGGGGAAGGGGAAGGCCGGGGAGCGCGGGAGCTTCTCGTTCCCCGACCTCGGGGCGCCGCACGACGTCGTCGACGCGGCGGCGGTGGTCGACCACTTCGCCACCGTGGAGGCGGAGAGGAGGGCGGGGGCGAGGGCCCAGTTCCTGGACGCGACGATGGAGGCGACGGCGAGCGCGCGGCTGGGGAGGGTCAAGAGGGAGCTCCTCGTCGACCGGAGGGTGCTCGACCTCGCCGGGCTGGAGCGGTGGCTGCGGCGCGGCGAGGCCGTCGCGGAGCTCGCGTGGTTCCCGGAGCTCTGCGCCGGCGAGGGCGGCGAGCCGGTGCCCCCGCTCGAGCTCTTCGAGTCCGCGTTCCGGGCGCTGCAGGCGGCGCGCTCCGACGAGCTCCACCGCGGCGCCGGTTTCAGGAAGCGCTGGGTTGGCCCGGCCGCCGTGCCGGAGTTCTTCCTCTGCCCTATCTCCAACAAGGTCATGGTGAATCCAGTCGTCATCTCCTCTGGAAAGGTGTGCCGAATCTTTCGCTGCTTCCTCAATTTCTTCAGTTCTTGTGGCTTGTTCTTGTGCTGTTCTTGGTATTCAATTCATTTGCATACCCTGCTTGGACATTGTAATTGATGTTCTCTGATAGTTTCTACTACTAGTTTCTTAGTGCTGGATTGGTACAAATGTTGCAAGATCGCTTCGGATTGGTGACAATGTAGAAATATTTTCTTAGTGCGATCTCTTAGCTTTGTTCAATTTCTGTCTGTGAGGAACTGAGTTTTTATCTAGAATTACAGTCCAAGGAAAATCCGTAATGGTATTATTGCTTTCGATTCAAGAAGTGCCATTTTTTGTTCTTTCCATAACAGAAATCCTCTTGGATTGCTTGAACCTTGTTATGCTGTTTCTGTCCTGCCAGGGTGTGAATTCGGATGTCCTATTACTTGTTCTGAATAATTTGTTTCCACCTAGAGATTGTTTCAGAAAACTTTATCTAGAATTACAGTCCAAGAAAAATCCGTAATGGTATTGTTCATTTGGATTCAAGAAGTGTTTTTGTTAATCATAACAGATTTCCTCTTAGACTGTTTCATTCAAGTTCCTGTTGGAATCTTGTTAGGTTGTTTCTGCCAGGGTGAATTCAGATCCCCTAGTTGTTATGCTTACATGTTCTGAAGTACTTGATTCCACCTAAAGTTTGTTTTAGAAGACATTATGCTTGCTTCTTTGGGCCATAGGATATGATATCACCAAGGAGAATAAAAATTATAGCAATTTGTAAGAGTTGTTTTTCTTTGGGAGTTATGTTTGCTTCAAACAAGGAAAGAAACATTATCCTGATGAGAAGAATACCCTGAAGGGCTGATTTTCAGCATGTTGTCAAGTTGTTCTCTTTCATCATGTAGGTTTGAGCAATGGCCTTTTACGAAAGCCGATTCAGGGACTGAGCTGTCATTATAAGTTAACCCCTTTCTCAAAATGGAGCTTTTGTCTGAATGATTCAGCAATATGCCTGGAGTGAAGCTAGTTGCAGTAGAAAATTACATATGTTAAAATTTGTTTATCTTTAAACTTTTGATCGTCTAGTACAAGGCATTTTTGTTTATCTTTATGTATCTTCATTTGTCTTGTTAAATCTCCCCTTATATAGTTTTCTAATTACTGTACTTCTTATTCTTATTCTGTTCCGAGGATTTATCCCTTTTGTCAAGAATAAAAGAGAGCTTCCATAGTGAATATTAACTCCCTGATTCTACTTCTTGTTTTTTTCATCTCACTGATTGCATCTGTTGTGTCTACAGACTGTTGAGGTTTTAGCATTGGAGAAATGGTGGAGTGAAAATAGACGCCTCTGTCCAGTAACTGATGAGATTCTCGACAACAGCATATTCATCCCCAATATCCTCATTATGCTGTGCACAGCACTATGGCGTACAAGAAACGGCATTACAGATGTGACAACAATTGCAGAACCACCAAAGATTTCTTCTGAGGAGGAAGCCCTGTTCAGGGAAATCAACCTCTTGGCACTTTCCCCTAGCTTGTTTGACAAAACATTTGATGCCATATTACGCCTACATGAACTCATCAGCAATGCGCAGTCCTCGCTCCTGCATCTGCTTGGCCAAAGCCCAGGGATGATTGCAAAACTTGCATGCCTCTTGCCAGAGACATGCCTGGACCCTGATCCCGGATTGGACGACATTATCCTCAAGATCATTGCGAAGACAGCTTCCTACAACCCCAATAAGGTGATATTAGGAGATGATCAATATGCCATACCTGTGCTGATTGCAAGGGCATTGCTAGGGCCTGTGGACACAAGAGTCAAGAGTGCTCAAATCCTTGGGTTACTGGCTGACAACTACTACAACAAGATCAAGATCGGTGAACTTGGAGGCTTCGCTGCGCTGATGGAGCTGCTGCTCTTGGTAGGAGACAGAGAAGTCAAGAGGACGGTGGCGATGGCGATCGCCAGTCTTTGCGAGGCCCAGGAGAACTGGAGCAGATTTGTCAGAGAGGGAGTAGCAGATGCTGCTATATCCTTGTTGCGCGACGACAACCTAGTGGATGAAGCCCGCAGCATCTTCTTGAAGGCTACTGGTTTTGAGCTGGCCATGACACAGGTTCTGGATAAGCTGATGTCATTTGGCGATGATGCCAACTGCTTAAAGATGGTTGAGAGCATCTGGAATACCTTCATCCGGACGAAATTAAGACGAAGGCGCCCCAACGTTACTCATGCATCTTCCTCAACAAGGGCCAGTGACGTATTTTCTGATACATCTTCTGACGGGAGTGTAGAACTGCCTATGCACGTTGAATTGACAGACAAGGCCGAGGACGATGTTAGGACCATTGTTTCATGGCTGCAGAAGAGGACGTGCTACCCGCGGACGTACAAATACGAAGATTGATCATTGGCAGGCCAACATGTGTAAAGAACAGAGAGGAGTGTAACTGTGGCTGGAAATCATACCTGATTCTTGACAGAGCACATTTTCTGTTAATCTGTACGTGACGGTAGCTCAAGTGCTCAACTCAAGCTAAAGAGTTGTTCTGATCTTTTTCTGAATGTCAAACTGATAAAAGATAGTATCTGAAAATAGCATTTGTTATATTGTTTCAGTTGTACAGCTGAGATACTGTATTGATCAATTCTGTCATTACACATTCCTGAGAATTAATATAGCTTAAATGGATGTTGCATGAAGTTGAGCTGCATACTTGGGAGATATTGTGAGTGAAGCCGTCTGGCTAAATATGAGCATTGGAGACCAACATTTTGAACCCTTTTTCTATGATAATTAGTTATCTTTTTCGAGAATGTCATAATTAGTATGAGATAGTGTGCACTCTGGCATATCTGATCCTGATCCTGCCAGATTAAGATTAAGAACATATATACAACATGACCTTATATTTACTAGTACCATCGTTTTGCAGTTGTTTATCTGTACCACAATTTGTAAACAAGAGTCCAGCTCCAGCTGCTCTCTTGATGCACTGTTTACCGTCTGAAAACCGCAGGCCTTTTAAGTTGAGAACTTACTCCTACCGTTGAAGGAATGAAGTTCTATAGATGGGCAGCAATTTCCCCAGCCAAACCATCTCAAAATCCATCAGCTAAACCATTTCTTCATATGGGTTGGACAAAATCATTTTATCAATGAAACTCATCTAATAAAATTTGCATGTCCATTTGCTTAATTCACCTGCCTTCTGTCAAGGCATCCAAGACGATTTATGCTCTTGTCTGAAAAACATCTTGCATCTACATTTTTCTTAGCAATGACATGACCATGGTGGATAGATCACAAAAGATAATGGCCCATGAGTTAGTGGCCCTGCATCTGTATACTTATATTATATATATGCCCTAAGCAAAAACTGTGGAATGACTCATCTCACCGTGGTGGCCATAAACGTGGTAGTAGTATATATATAGATATGTATAAATGTAAGTGCCTAAGTGTGTGTGTGCTAGCTTAAGCTTGATCAATTCAAGCCATGGCTGAAGGCTGAAGCTTTCCTGGGGAAGTACTTGCGCGCCCGCAGCTGCCGGCCGTTGATGACCAGCTTCACCAGGTGTTCCCCGCCGAGCACCGCGGCCGCCGTCGCCGCGTGGCGGAACACGATCCTCCCGTACGTCGGCGGCTCGCCGGCCGGCGTCCTCTCCATCATCACCTTCTCCAAGCAGTCGCCCCACCTCCTGCAGATGATGTTTGCAGGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015240