BGIOSGA015284

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Revision as of 04:11, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015284| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015284, complete gene.| tag = OsI_154...")
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Gene Name

BGIOSGA015284

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015284, complete gene.

LocusTag

OsI_15473

Ensembl Transcript ID

BGIOSGA015284-TA

Ensembl Protein ID

BGIOSGA015284-PA

Length

5293

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14322000..14327292

Sequence Coding Region

14327112..14327292,14326697..14326741,14326141..14326381,14325425..14325834,14322000..14323954

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14322000..14327292 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14322000..14327292 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTGCGACTGATGGGAAATCTACGGTTTGTGTGCGCCCTAAGCGTAAGCGACCAATGTTAGAGACTAATGATGGTGAGCTGCATGAATCACCATCAAACCACGCTGATGACTTCCCCACAGCCTTCAATTTCAGATCTAACTGGCATGTTCGACGCCGTTTGTGTACTCAGCTTGCTGATGCATCGTCTTCTCATACTGCTATTCCTACAAATGGTCATTCCCGTTCTGTTTTCTCTCCGTTGAGCCTTGGTCCACCAAGTCACACATGTGGTTATTGTGGTGCATTGTTTTGGTATGAGGAGCGTATCGATCGACGCCGTCACACAACAAGACCATTATACAACAAATGCTGCAAAGGAGGGAGTGTTATCTTGCCTCCCTACAAACCACCACCAGAGCCTTTGCATAGTCTTCTAACTGGAGTGGATAGAGCTAAATCAGCTCATTTCTTTGAGAATATAAGGGTTGCCCGTGATAGACTTTCTAGGGCAGGTGCATCCGATGACCATTATTATATAAGGTTGTTTGGATCCCCTGACAAGCATGGTGATATATTTAGTGCTCCAGTAGCATCAGAGGTTGTTGGATTGGTTGTTGGTGACTTAGGTACAAGTGATGTTGGACGTGACCTGATGGTAGAAGACAAGGCTGGCAATCTAAGGAAGGTTAAAGAAGATCATTGCAAATTTATGGCAATGCAATACCCAATTTTATTCCCTTACGGAGAAGATGGTTATCATGAAAACATTACATATCGACAGTCTCGACGATCAGCAGGGATTAAACGGAAGCGTGCCACAGTGGTAGAATATTATGCCTATAGGCTTCATGACAGAGGTGATGATTTCAACACTCCAATGCGTTGCAAGAGAGTGAAGGGGGTAAGGTCATACTTGGAGATCAGAACAGTTGAAGGCCAGCGGTATCCAACATTCCAGGCTGCTTGCCAAGCTCTAGGTCTCCTCGGTGATGATCGTGAGTGGTCATCTGCTATAGTTGATGCAGCTCATTGGGCTCTTCCATACCAGCTCCGTGAGTTGTTTGTGACACTTCTCCTCTTTTGCAATGTTACAAATCCTTTGGCTTTATTTGAAGAGCATTTTTCTATAATGGGTGAGGACTACGTACACCACACTGGACATAGTATGACAGGCCATTCTACATCCTTTACCCAGCATGTGAGATCATTTGTTCTTACTGAAATTGACAAGTTGCTTAGAAATTCTGGATATAACTTAGCACACTTTAGCTTACCCGAGCCCATTCTTAGCAGTGCATACATAATTGGCAATAGACTTTTAACAGATGAACAAGCTTATGATATTGATAGGATATCAGTAGAAGCAGCTAATCAGCTTAATCAATTGAATCTGAATCAAAAACATGTTTATGATGCTGTCCTTCAATCAGTCAACAGTTGCATTGGTCACACATTCTTTGTGCATGGCTATGGTGGTACCGGGAAGACATTTCTTTGGAATGCTTTGCTTAATGCTGTTAGAGCCCAAGGGAAAATTGCTTTGGCTGTTGCATCATCCGGTATTGCAGCACTCCTTCTACCAGGTGGTCGCACACCACATTCTCGGTTCAGAATACCATTAGATATACAAGAGCATTCCCTTTGTGCTATCAAAAAAAATACCCATCTGGCCCAATTGATACAACAAACATCTTTAGTTATATGGGATGAGGCACCTGTCAATCATAGACATTGTTTTGAAGCTCTGGATAGAACACTAAGGGATATTCTATCCTCAAATGATCCATCCCTTCTTGACAAGCAATTTGGAGGCCTCACAGTTGTTTTCGGAGGGGATTTTAGGCAAACACTTCCTGTACTACCTAATGCAAAGAAACATGAAATCTTAAGCGCATCTATTACCCGCTCTTATTTGTGGTCCCACTGCATTGTTCTGCATCTAACTGAGAATATGAGGCTTCGATCACCGTTGTTGTCTGGTGCTCAGCGAAATCGCCTTCAAGAATTCTCAGAATGGCTTCTTCAAATTGGAGAAGGAACATTGCCCGATAATTCTCCTGCTAATAAACATGATACATGTTACATCAAAATTCCAGAATACTTGCTTCTGCCACTTGGGTCAAGAAATGTTTCCTCGCTGGTATCTTTTGTGTACAATCAGTCAAGCATCTCAGATATGGTTGCTTATCTTTGTGAACGAGCAATTCTTGCCCCAACTAATGACATAGCTACAGAAATCAACTCCTACATGATATCTCAGTTGGCAACAGAAGAAATGTCATATTATAGCTCAGACATCATAGATGATAGCACAACTAACCGTGCTACAATTGAGGCCCTTTATCCTGTGGAGTTCCTCAACACAATACGCATGAGTGGCTTGCCAGATCATTGCTTACAATTAAAGGTGGGAGTTCCTATAATGTTGCTGCGCAATTTGAATCCATCAAAGGGCCTTTGCAATGGAACAAGACTCATAGTAACTCAGTTGACTCACCGTATAATAGAAGGAGAAATAATCACAGGAAAAGCTAAAGGATGTAAGGCATATATACCAAGGATAGTAACTACATCTACTGACAAAAAGTGGCCCTTTAAGATTAAGCGTCGCCAATTTCCAGTTAGAGTTTCATATGCAATGACTATAAATAAGAGCCAAGGGCAGACACTTAGTAGGGTTGGAGTTTATCTACCTAGCCCGGTTTTTTCACATGGTCAACTATATGTTGCTTTCTCACGAGTCATGTCCCCAGATGGTTTACGTGTTCTGATCGAGAACAACTCTCCTGAACATGCAAACAACACTCAGAATGTTGTCTATAAAGAAATATTTGATGATCTTGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MSATDGKSTVCVRPKRKRPMLETNDGELHESPSNHADDFPTAFNFRSNWHVRRRLCTQLADASSSHTAIPTNGHSRSVFSPLSLGPPSHTCGYCGALFWYEERIDRRRHTTRPLYNKCCKGGSVILPPYKPPPEPLHSLLTGVDRAKSAHFFENIRVARDRLSRAGASDDHYYIRLFGSPDKHGDIFSAPVASEVVGLVVGDLGTSDVGRDLMVEDKAGNLRKVKEDHCKFMAMQYPILFPYGEDGYHENITYRQSRRSAGIKRKRATVVEYYAYRLHDRGDDFNTPMRCKRVKGVRSYLEIRTVEGQRYPTFQAACQALGLLGDDREWSSAIVDAAHWALPYQLRELFVTLLLFCNVTNPLALFEEHFSIMGEDYVHHTGHSMTGHSTSFTQHVRSFVLTEIDKLLRNSGYNLAHFSLPEPILSSAYIIGNRLLTDEQAYDIDRISVEAANQLNQLNLNQKHVYDAVLQSVNSCIGHTFFVHGYGGTGKTFLWNALLNAVRAQGKIALAVASSGIAALLLPGGRTPHSRFRIPLDIQEHSLCAIKKNTHLAQLIQQTSLVIWDEAPVNHRHCFEALDRTLRDILSSNDPSLLDKQFGGLTVVFGGDFRQTLPVLPNAKKHEILSASITRSYLWSHCIVLHLTENMRLRSPLLSGAQRNRLQEFSEWLLQIGEGTLPDNSPANKHDTCYIKIPEYLLLPLGSRNVSSLVSFVYNQSSISDMVAYLCERAILAPTNDIATEINSYMISQLATEEMSYYSSDIIDDSTTNRATIEALYPVEFLNTIRMSGLPDHCLQLKVGVPIMLLRNLNPSKGLCNGTRLIVTQLTHRIIEGEIITGKAKGCKAYIPRIVTTSTDKKWPFKIKRRQFPVRVSYAMTINKSQGQTLSRVGVYLPSPVFSHGQLYVAFSRVMSPDGLRVLIENNSPEHANNTQNVVYKEIFDDLA</aaseq>

Gene Sequence

<dnaseqindica>1..181#552..596#912..1152#1459..1868#3339..5293#ATGTCTGCGACTGATGGGAAATCTACGGTTTGTGTGCGCCCTAAGCGTAAGCGACCAATGTTAGAGACTAATGATGGTGAGCTGCATGAATCACCATCAAACCACGCTGATGACTTCCCCACAGCCTTCAATTTCAGATCTAACTGGCATGTTCGACGCCGTTTGTGTACTCAGCTTGCTGGTATGACCACCATGGTGCTGGATTTTTTTAAAACACCTCTCTGTGCTTCCTGCTCATTTTTATATCTTAAATAGAATACTAAGTTTACAGATAGTGTGCTCCATCTGCCTTCACAATGCTTCCATGCAATGTAGCTAATGCTATTCTCTTACTTATTCCTCAGATTTTCCTCGCCCGGATTCTGCCATGGCTGCTCAATCACGTAAAAAACGTAAAGCATATATGTCACAACATTCTAGGGTATTGCGACGGCGGTTGGCAGATTCATCATCTTCTATACATGATAAAGGTGTCTATATTGTGTCTCAAATTTACAATTCCTTTTCTTTTGCATATTATGTGCTTAATATCCTAATATTGCTTTCCGCAGATGCATCGTCTTCTCATACTGCTATTCCTACAAATGGTCATTCCCGTAAGTCCATCGCTAACATATATTTTTCCTGTTTGTTCTCGGCCATATGTATTCGAACACATTTTGTTCCTTACAAATGAGAATGCATACACGATACATACTGATTCATCTTAATTCTCACAGACGACTCCTATGCGATGCTCAATGATGAATGTTATCTCCGCTGCTCAATTATGGCTGCTCATCAAACTACTCGATTGTGAATGTTCAGTCTCGATGTTCATCTCGATGTATTCACTCTTGCCTCGATAGATTGATACCTTTTACCCTAAAATGTGCGCTCGAACTCACATTTTCCTTTTTTTTTGTTGTCAGGTTCTGTTTTCTCTCCGTTGAGCCTTGGTCCACCAAGTCACACATGTGGTTATTGTGGTGCATTGTTTTGGTATGAGGAGCGTATCGATCGACGCCGTCACACAACAAGACCATTATACAACAAATGCTGCAAAGGAGGGAGTGTTATCTTGCCTCCCTACAAACCACCACCAGAGCCTTTGCATAGTCTTCTAACTGGAGTGGATAGAGCTAAATCAGCTCATTTCTTTGAGAATATAAGGTATTACAACTCTATGTTTGCTTTTACATCAATGGGGGTGAATGTAATTGATTCTATCAATGATGGCCGTGGTCCATATGTATTCAAAATAAGTGGTCAGCTCTGCCATCGTATTGGCTCGCTTCTGCCAAAGAAGGATAAACGTCCAGAATATGCTCAGTTGTACATTTTTGACACTAAAAATGAGCTTATGAATAGATTGCATGTTGGCACCTATACAAATAGAGCCTTCCAACCAAATGATGAAATTGTAGCTGCTCTCATGGAGATGTTTGATACCCATAACCCAATTGTCAAATTATTTAGGGTTGCCCGTGATAGACTTTCTAGGGCAGGTGCATCCGATGACCATTATTATATAAGGTTGTTTGGATCCCCTGACAAGCATGGTGATATATTTAGTGCTCCAGTAGCATCAGAGGTTGTTGGATTGGTTGTTGGTGACTTAGGTACAAGTGATGTTGGACGTGACCTGATGGTAGAAGACAAGGCTGGCAATCTAAGGAAGGTTAAAGAAGATCATTGCAAATTTATGGCAATGCAATACCCAATTTTATTCCCTTACGGAGAAGATGGTTATCATGAAAACATTACATATCGACAGTCTCGACGATCAGCAGGGATTAAACGGAAGCGTGCCACAGTGGTAGAATATTATGCCTATAGGCTTCATGACAGAGGTGATGATTTCAACACTCCAATGCGTTGCAAGAGAGGTACACAAGCCTATGTTATTGACGCATATTGTTGCATGGAAGAATCTCGGTTGAGTCACTTTAGGACTAAATCATTTCAGCAAAAATATAGAACCGCTCCTCTCAAAGAAATTCATGACACAATACATAAAGGCATTGTACAAGGGTCTGAGGCGGGCCAGAGAATTATACTACCTTCTTCTTATGTTGGAGGGCCACGCTATCTGTACCAAAACTACCTAGATTGTGTTGCTCTTTGTCGAAAGTATGGTTGTCCTGATTTGTTTATTACTTTCACGTCGAACCCTTTATGGACAGAAATTACTCAAGCTTTGGCTCTAATTCCTGGTCAACATTCATCTGACAGGCCTGATATTGTTGATCGTGTATTTCATATGAAGCTACATCTCTTCATTGATGATATCACAAAGAATGAATTTTTTGGCCCAATTACTGCAGGTTTGATACATTACTTTTATTCCAATCGTTCTCTATTTATTATCTGTTTTTAATAGCAGCAAATTCACTTTATTTCTTTCTGCTGTTACATAGTTGTGTACACCATCGAATTTCAAAAACGTGGTCTTCCGCATGTCCATATTATTTTATGGCTAAAAAAAAATGGTGCATTGACAGCTGATGAAGTTGATAAGTTCATATCAGCACAGTTACCAGATCCTTCTGTCGATTCAATTGGTTTTGACGCAGTATCTACATTTATGATTCATGGTCCTTGTGGTGAGGCACATCCATCATGTGCTTGCATGGTTAACGGCGAATTCTCTAAGAACTATCCAAAGGAATATTGTGAAAAGACAACAATCTTACAAAATGGACATGTTAGGTATGCTCGGCCGAAGAATGGGATAGTTACCAAAAAGAATGGCATTGCTGTTGATAATGCATTTGTTGTCCCACATAATGTGGATTTATGTGTGAAGTATCAAGCACACATAAATGTAGAGAGAGTTAATCGTGATGGGATGGAAAAATATCTATTCAAGTATTTTACCAAAGGTTTAGATTGTTCAAAGGTTGGCCTCCAACGTAAAAGAGAATCTAGTGAATGCTCTACCTCTACAAAAGGTGTTAATGAGATCCAAGACTACCTAGAGTGCAGATGTGTGACCCCCAATGATGCAGCTTGGCGTTTGCTCCAGTTTGAAATTCACCACACTGACCCTTCTGTTGAGCGACTCCCTGTCCATTTACCACTTGAAAACAATGTTGTATATACTGAGGATGACAACCTAGAACAAGTCTTGCAAAACCCATTTATTCAAATTACAAAGCTCACTGCCTGGTTTGAAGCAAACAAGACCTGTCCTGAAGCTGTGCGCTACACATATGCAGAGTTCCCAGAGCACTTCACTTGGCATGCTGATGGAAAGTATTGGGATTTTCGACACGGTACTGGTAGGATCGGAAGACTAGCCAATGTAGGCCCTAACCAAGGGGATTCTTACTATCTCCGTATGTTGCTGCATATAGTGAAGGGGGTAAGGTCATACTTGGAGATCAGAACAGTTGAAGGCCAGCGGTATCCAACATTCCAGGCTGCTTGCCAAGCTCTAGGTCTCCTCGGTGATGATCGTGAGTGGTCATCTGCTATAGTTGATGCAGCTCATTGGGCTCTTCCATACCAGCTCCGTGAGTTGTTTGTGACACTTCTCCTCTTTTGCAATGTTACAAATCCTTTGGCTTTATTTGAAGAGCATTTTTCTATAATGGGTGAGGACTACGTACACCACACTGGACATAGTATGACAGGCCATTCTACATCCTTTACCCAGCATGTGAGATCATTTGTTCTTACTGAAATTGACAAGTTGCTTAGAAATTCTGGATATAACTTAGCACACTTTAGCTTACCCGAGCCCATTCTTAGCAGTGCATACATAATTGGCAATAGACTTTTAACAGATGAACAAGCTTATGATATTGATAGGATATCAGTAGAAGCAGCTAATCAGCTTAATCAATTGAATCTGAATCAAAAACATGTTTATGATGCTGTCCTTCAATCAGTCAACAGTTGCATTGGTCACACATTCTTTGTGCATGGCTATGGTGGTACCGGGAAGACATTTCTTTGGAATGCTTTGCTTAATGCTGTTAGAGCCCAAGGGAAAATTGCTTTGGCTGTTGCATCATCCGGTATTGCAGCACTCCTTCTACCAGGTGGTCGCACACCACATTCTCGGTTCAGAATACCATTAGATATACAAGAGCATTCCCTTTGTGCTATCAAAAAAAATACCCATCTGGCCCAATTGATACAACAAACATCTTTAGTTATATGGGATGAGGCACCTGTCAATCATAGACATTGTTTTGAAGCTCTGGATAGAACACTAAGGGATATTCTATCCTCAAATGATCCATCCCTTCTTGACAAGCAATTTGGAGGCCTCACAGTTGTTTTCGGAGGGGATTTTAGGCAAACACTTCCTGTACTACCTAATGCAAAGAAACATGAAATCTTAAGCGCATCTATTACCCGCTCTTATTTGTGGTCCCACTGCATTGTTCTGCATCTAACTGAGAATATGAGGCTTCGATCACCGTTGTTGTCTGGTGCTCAGCGAAATCGCCTTCAAGAATTCTCAGAATGGCTTCTTCAAATTGGAGAAGGAACATTGCCCGATAATTCTCCTGCTAATAAACATGATACATGTTACATCAAAATTCCAGAATACTTGCTTCTGCCACTTGGGTCAAGAAATGTTTCCTCGCTGGTATCTTTTGTGTACAATCAGTCAAGCATCTCAGATATGGTTGCTTATCTTTGTGAACGAGCAATTCTTGCCCCAACTAATGACATAGCTACAGAAATCAACTCCTACATGATATCTCAGTTGGCAACAGAAGAAATGTCATATTATAGCTCAGACATCATAGATGATAGCACAACTAACCGTGCTACAATTGAGGCCCTTTATCCTGTGGAGTTCCTCAACACAATACGCATGAGTGGCTTGCCAGATCATTGCTTACAATTAAAGGTGGGAGTTCCTATAATGTTGCTGCGCAATTTGAATCCATCAAAGGGCCTTTGCAATGGAACAAGACTCATAGTAACTCAGTTGACTCACCGTATAATAGAAGGAGAAATAATCACAGGAAAAGCTAAAGGATGTAAGGCATATATACCAAGGATAGTAACTACATCTACTGACAAAAAGTGGCCCTTTAAGATTAAGCGTCGCCAATTTCCAGTTAGAGTTTCATATGCAATGACTATAAATAAGAGCCAAGGGCAGACACTTAGTAGGGTTGGAGTTTATCTACCTAGCCCGGTTTTTTCACATGGTCAACTATATGTTGCTTTCTCACGAGTCATGTCCCCAGATGGTTTACGTGTTCTGATCGAGAACAACTCTCCTGAACATGCAAACAACACTCAGAATGTTGTCTATAAAGAAATATTTGATGATCTTGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015284