Os12g0633400

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0633400| Description = Similar to Pathogenesis-related protein PR-1 precursor| Version = NM_001073883.1 GI:115489727 GeneID:4352877| Length...")
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Gene Name

Os12g0633400

Description

Similar to Pathogenesis-related protein PR-1 precursor

Version

NM_001073883.1 GI:115489727 GeneID:4352877

Length

1680 bp

Definition

Oryza sativa Japonica Group Os12g0633400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27372433..27374112

Sequence Coding Region

27372749..27373094,27373181..27374091

Expression

GEO Profiles:Os12g0633400

Genome Context

<gbrowseImage1> name=NC_008405:27372433..27374112 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27372433..27374112 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagatgatgcgcacggtgatcgccgccgtcgtggtcggcctcctcgccgcggcccacacggccaccaccgcaccggaacaatcctacggcggcgcaacggcgaccgtggcgccgaagcagccggcggcgggggaagacgtcaacaaggccttggcggcggagacggcggctgccgaggcggaggacgccgccgaggaggaggacgccgcggccgctctggtcaccggcttcaccgccggcgcggcgaactccgcgccgggggtgactgccgtcatgaagccggtgctggagaaggcggacgccgggcaattctaccaggacgtgccatggattccggatcccaacgacgaggggaatcctcccaagtctctgccggcggcgcaggtcctgccggccaagggcggcgctggcgcggcaggatcatcgccgccgtcgaaggaggtgcaggtggattactacgcgacgacccagccgaagaagccggaggagccgccgacggtcgcggcggtccaaaaggacaattgcgtcccgccggcggcgcccaagccagctgttccggcgacgccgtcgacgtctcctccttcgaataaggagtatgctccggcggcgccaggcgtggtgccggtgaaccagccttcttccccggcggcgccagcaggcgtggtgccggcgccggtgcagccttcttccccggcggcgccagcaggcgtggtgccggcgccggtgcagccttcttccccggcgacggcggtgccaaagcctccttccaatgacccgtacgccccggcgaccagcaacactccggcggcggaggagcagaaggacgggctgaacgagaaggcgatcagcgacatcgtgagggagcacaacatgttccgcacgagggagcacgtgccacccatagtgtggaacgcgacgctggcgaagtacgcgcaggagtacgcggatttgaggagaggggattgccagctggagcactctcatggcccctacggggagaacatgatgttcgggacggggaagcagtggacgtggaagaagacggtggacgagtggagcgacgagaagaagagctacgactacaaatccaacagctgcaaggccggcgccatgtgcacccactacaccgccatcgtctggaagaacaccaccgccgtcggctgcggccgcgtcgtctgcacctccggcgacaccatcatggtctgcagctactggccgcccggcaactacgtcggcgtcaagccctactaa</cdnaseq>

Protein Sequence

<aaseq>MDKMMRTVIAAVVVGLLAAAHTATTAPEQSYGGATATVAPKQPA AGEDVNKALAAETAAAEAEDAAEEEDAAAALVTGFTAGAANSAPGVTAVMKPVLEKAD AGQFYQDVPWIPDPNDEGNPPKSLPAAQVLPAKGGAGAAGSSPPSKEVQVDYYATTQP KKPEEPPTVAAVQKDNCVPPAAPKPAVPATPSTSPPSNKEYAPAAPGVVPVNQPSSPA APAGVVPAPVQPSSPAAPAGVVPAPVQPSSPATAVPKPPSNDPYAPATSNTPAAEEQK DGLNEKAISDIVREHNMFRTREHVPPIVWNATLAKYAQEYADLRRGDCQLEHSHGPYG ENMMFGTGKQWTWKKTVDEWSDEKKSYDYKSNSCKAGAMCTHYTAIVWKNTTAVGCGR VVCTSGDTIMVCSYWPPGNYVGVKPY</aaseq>

Gene Sequence

<dnaseqindica>1019..1364#22..932#acacacaagggaaaaaaaaagatggacaagatgatgcgcacggtgatcgccgccgtcgtggtcggcctcctcgccgcggcccacacggccaccaccgcaccggaacaatcctacggcggcgcaacggcgaccgtggcgccgaagcagccggcggcgggggaagacgtcaacaaggccttggcggcggagacggcggctgccgaggcggaggacgccgccgaggaggaggacgccgcggccgctctggtcaccggcttcaccgccggcgcggcgaactccgcgccgggggtgactgccgtcatgaagccggtgctggagaaggcggacgccgggcaattctaccaggacgtgccatggattccggatcccaacgacgaggggaatcctcccaagtctctgccggcggcgcaggtcctgccggccaagggcggcgctggcgcggcaggatcatcgccgccgtcgaaggaggtgcaggtggattactacgcgacgacccagccgaagaagccggaggagccgccgacggtcgcggcggtccaaaaggacaattgcgtcccgccggcggcgcccaagccagctgttccggcgacgccgtcgacgtctcctccttcgaataaggagtatgctccggcggcgccaggcgtggtgccggtgaaccagccttcttccccggcggcgccagcaggcgtggtgccggcgccggtgcagccttcttccccggcggcgccagcaggcgtggtgccggcgccggtgcagccttcttccccggcgacggcggtgccaaagcctccttccaatgacccgtacgccccggcgaccagcaacactccggcggcggaggagcagaaggacgggctgaacgagaaggcgatcagcgacatcgtgagggagcacaacatgttccgcacgagggagcacgtgccacccatagtgtaagcatcatgcacgcacgcaagctgttcgatggaatgccaatggcaatggcgatgatcgacaatggcatatataataatggcaggtggaacgcgacgctggcgaagtacgcgcaggagtacgcggatttgaggagaggggattgccagctggagcactctcatggcccctacggggagaacatgatgttcgggacggggaagcagtggacgtggaagaagacggtggacgagtggagcgacgagaagaagagctacgactacaaatccaacagctgcaaggccggcgccatgtgcacccactacaccgccatcgtctggaagaacaccaccgccgtcggctgcggccgcgtcgtctgcacctccggcgacaccatcatggtctgcagctactggccgcccggcaactacgtcggcgtcaagccctactaattcattcttcatcatatcgatcgatccaccacccctgctgctgccctccatctctcacccatcatcgatcgatcgtcatccatgcatccaccatcgtcgtcgtctcatcttattaataatatatatatgcatcagattcttaattattataactaattaattaatgttatcttaacttgttagtgatatgccctagaggctatcatagagatgattatatcacacactatgtttacatatttatccgactttgttccttgaaatagataaacttattattggttaatgaatgtgtgattctttcataagactcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0633400, RefSeq:Os12g0633400