BGIOSGA015293

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Revision as of 04:11, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015293, complete gene.| tag = OS04G03...")
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Gene Name

BGIOSGA015293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015293, complete gene.

LocusTag

OS04G0349700

Ensembl Transcript ID

BGIOSGA015293-TA

Ensembl Protein ID

BGIOSGA015293-PA

Length

4815

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14166532..14171346

Sequence Coding Region

14170946..14171346,14166532..14169310

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14166532..14171346 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14166532..14171346 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATCTCCCGTAGTACCAGCATGCTCCTGCTGTCCCCGCTCGTTGTTCACCTGCTCCTCCTGCTTGCGATCATCCAACACTCCTGCTCCCTCGGCACCTACAGCAGCAGCAGCATCAACCAAACTGCAAAGGTGCCGTACTGCCGGCCCGACCAGGCCTCGGCGCTGCTCCGGCTGAGGAGGCGCTCCTTCTCCCCCACCAACGATTCCGCGTGCACCCTCGCGTCGTGGCGCCCCGGCACCGACTGCTGCGCCTGGGAGGGCGTCGCCTGCAGCACCAGCACCGGCACCGGCACCGGCGGCGGCGGCGGCCGTGTCACCACCCTCGACCTCGGCGGATGCTGGCTGGAGATCAGCGCCGCCGGCCTCCACCCCGCTCTCTTCGAACTCACCTCCCTCAGGTACCTGGACCTCTCGGAGAACAGCCTGAACGCTAACGACTCCGAGCTCCCGGCCACTGGGTTCGAGCGGCTCACCGAGCTCACCCACCTCAACCTCTCCTACTCCGACTTCACAGGAAACATACCACGCGGGATACGGCGGCTCAGCAGACTGGCGTCTCTCGACCTGTCAAACTGGATCTATCTCGTTGAAGCAGACAACGATTACTTCCTCCCGCTCGGCGCAGGGCGGTGGCCCGTCGTCGAGCCAGACATCGCATCGCTGCTCGCCAACCTCAGCAACCTGAGAGCGCTCGATCTGGGCAATGTTGACCTGTCCGGCAATGGCGCGGCATGGTGCGATGGATTGACCAACTCCACTCCTCGGCTCGAGGTTCTCAGGCTCAGAAACACCCACCTCGATGCTCCGATCTGCGGATCGCTGTCCGCCATTCGCTCCTTGGTCGAGATCAACCTGGAGTTCAACAAACTGCACGGCGGAATTCCGGATTCCTTGGCTGATCTGCCTTCCCTCGGTGTTCTTAGGCTCGCCTACAATCTCCTCCAAGGGCCATTCCCGATGAGGATATTTGGAAACAAGAAGTTGAGGGTCGTTGATATCAGCTATAATTTCAGACTGTCCGGTGTGCTGCCCGATTTCTCATCGGGTAGTGCTCTGACTGAGCTGCTCTGTAGCAACACTAACCTGTCTGGTCCCATCCCGAGTTCTGTAAGCAATCTCAAATCCTTGAAGAGTTTGGGTGTTGCAGCAGCTGGTGACGGTCACCGAGAAGAGCTTCCCTCTTCAATTGGTGAGCTCAGGTCCTTAACATCGTTACAGCTTTCTGGGTCTGGCATAGTAGGAGAAATGCCTTCTTGGGTTGCGAATTTGACTTCTTTGGAAACTCTGCAATTCTCCAACTGTGGCTTATCTGGTCAACTGCCTTCATTCATGGGTAATCTCAAGAACCTAAGTAACTTAAAATTGTATGCATGCAATTTTTCTGGTCAGGTACCTCCACATCTATTTAATCTAACTAATTTGGAAGTCATAAACCTTCATTCCAATGGTTTCATTGGCACAATCGAACTCAGCTCGTTCTTCAAATTGCCCAATCTATCAATACTGAATCTTTCAAACAACAAACTTTCTGTACAAGTCGGGGAACATAATTCTTCATGGGAACCCATCAATAATTTTGACACTCTATGTCTAGCATCTTGTAATATATCCAAGCTCCCTGATACCTTGAGGCACATGCAATCGGTTCAAGTTCTTGACTTTTCAAGCAACCACATCCATGGCACTATACCTCAGTGGGCATGGGATAATTGGATCAACTCGCTCATCCTGATGAACTTGTCACACAACCAATTCAGTGGTAGTATAGGATATGGCTCTGTCATTTCAGATGGTATGTTTGTTATTGATATCAGTTATAACCTATTTGAAGGTCACATACCTGTACCAGGACCACAGACCCAACTGTTTGATTGCTCGAACAATCGATTTTCATCCATGCCATCCAATTTTGGTTCTAATTTAAGCAGTATTTCCCTTCTCATGGCTTCCAGCAACAAGCTGTCCGGAGAAATTCCACCATCGATTTGTGAAGCAACAAGCCTTTTGCTCCTTGATCTCTCCAATAATGATTTTCTTGGCTCCATCCCTTCTTGTTTAATGGAGGATATGAGTGACCACCTGAATGTATTAAACTTGAAAGGAAATCAACTTGGTGGAAGATTGCCAAATAGCCTAAAGCAAGATTGTGCATTTGGGGCATTAGATTTTAGTGACAATCGGATTGAAGGGCAGTTACCCAGATCTCTAGTTGCTTGCAAAGACTTGGAGGCTTTTGATATCAGAAATAATCGTATTGATGATACATTTCCATGTTGGATGAGTATGCTTCCTAAACTTCAAGTCCTTGTTCTGAAATCCAACAAGTTTGTTGGGAATGTGGGGCCTTCTGTTTCTGGAGATAAAAATAGCTGTGAGTTTATAAAACTTCGAATTTTTGACTTGGCTTCAAACAATTTCTCTGGACTATTACAAAATGAATGGTTTAGAACAATGAAATCCATGATGACTAAAACTGTCAATGAGACGCTGGTCATGGAAAATCAATATGATCTACTTGGCCAAACATACCAAATTACCACTGCCATCACATACAAAGGGTCTGATATTACTTTTTCGAAGATATTGAGGACAATTGTAGTCATTGATGTTTCGGATAATGCGTTCTATGGTGCCATTCCCCAGTCTATTGGGGACCTAGTTCTACTTAGTGGGGTAAACATGTCACATAATGCCCTCACTGGACTGATCCCATCTCAGCTTGGCATGCTACATCAACTTGAGTCGCTCGACCTTTCTTCAAATGATCTTTCAGGAGAGATTCCACAAGAGTTGGCATCACTGGACTTCCTTTCAACATTGAATATATCCTACAATAAGTTGGAGGGAAGAATACCCGAGTCTCCCCACTTCTTGACATTCTCTAATCTCTCATTTCTAGGAAACATGGGTCTCTGTGGACTTCAGCTGTCCAAAGCATGCAACAACATATCATCAGATACGGTTCTACATCAATCAGAGAAGGTGTCAATAGACATTGTGTTGTTCCTTTTTGCCGGACTCGGATTTGGTGTTGGATTCGCAATTGCAATTCTCTTAACATGGGGAACCTCAAGGAGCTTGTCCTTAGCTTTACAGACTGTCGCAATGAGCTACCAGGGCAATGCTCTGTCTTCCACTCGTCCAGCTACTTCACCTAACCAATTACAGTATCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MISRSTSMLLLSPLVVHLLLLLAIIQHSCSLGTYSSSSINQTAKVPYCRPDQASALLRLRRRSFSPTNDSACTLASWRPGTDCCAWEGVACSTSTGTGTGGGGGRVTTLDLGGCWLEISAAGLHPALFELTSLRYLDLSENSLNANDSELPATGFERLTELTHLNLSYSDFTGNIPRGIRRLSRLASLDLSNWIYLVEADNDYFLPLGAGRWPVVEPDIASLLANLSNLRALDLGNVDLSGNGAAWCDGLTNSTPRLEVLRLRNTHLDAPICGSLSAIRSLVEINLEFNKLHGGIPDSLADLPSLGVLRLAYNLLQGPFPMRIFGNKKLRVVDISYNFRLSGVLPDFSSGSALTELLCSNTNLSGPIPSSVSNLKSLKSLGVAAAGDGHREELPSSIGELRSLTSLQLSGSGIVGEMPSWVANLTSLETLQFSNCGLSGQLPSFMGNLKNLSNLKLYACNFSGQVPPHLFNLTNLEVINLHSNGFIGTIELSSFFKLPNLSILNLSNNKLSVQVGEHNSSWEPINNFDTLCLASCNISKLPDTLRHMQSVQVLDFSSNHIHGTIPQWAWDNWINSLILMNLSHNQFSGSIGYGSVISDGMFVIDISYNLFEGHIPVPGPQTQLFDCSNNRFSSMPSNFGSNLSSISLLMASSNKLSGEIPPSICEATSLLLLDLSNNDFLGSIPSCLMEDMSDHLNVLNLKGNQLGGRLPNSLKQDCAFGALDFSDNRIEGQLPRSLVACKDLEAFDIRNNRIDDTFPCWMSMLPKLQVLVLKSNKFVGNVGPSVSGDKNSCEFIKLRIFDLASNNFSGLLQNEWFRTMKSMMTKTVNETLVMENQYDLLGQTYQITTAITYKGSDITFSKILRTIVVIDVSDNAFYGAIPQSIGDLVLLSGVNMSHNALTGLIPSQLGMLHQLESLDLSSNDLSGEIPQELASLDFLSTLNISYNKLEGRIPESPHFLTFSNLSFLGNMGLCGLQLSKACNNISSDTVLHQSEKVSIDIVLFLFAGLGFGVGFAIAILLTWGTSRSLSLALQTVAMSYQGNALSSTRPATSPNQLQYL</aaseq>

Gene Sequence

<dnaseqindica>1..401#2037..4815#ATGATCTCCCGTAGTACCAGCATGCTCCTGCTGTCCCCGCTCGTTGTTCACCTGCTCCTCCTGCTTGCGATCATCCAACACTCCTGCTCCCTCGGCACCTACAGCAGCAGCAGCATCAACCAAACTGCAAAGGTGCCGTACTGCCGGCCCGACCAGGCCTCGGCGCTGCTCCGGCTGAGGAGGCGCTCCTTCTCCCCCACCAACGATTCCGCGTGCACCCTCGCGTCGTGGCGCCCCGGCACCGACTGCTGCGCCTGGGAGGGCGTCGCCTGCAGCACCAGCACCGGCACCGGCACCGGCGGCGGCGGCGGCCGTGTCACCACCCTCGACCTCGGCGGATGCTGGCTGGAGATCAGCGCCGCCGGCCTCCACCCCGCTCTCTTCGAACTCACCTCCCTCAGGTATGAAAAGAATTTGACAATATATATGTATATTTTTTTTAGAATTTGTATTTATATACATGTTTGCGGGAAAATTACAAAAATATATTCTTAATTCCTTCGGGTAAGAAAGTAATATGAGAATATATATATTAATATTAAAAATATATATACATGTGTTTGGTTTGGGATATGATGTGATGGGTTGGATCCATCCTTGTTTTTTTTAATGGAATGATTCTGTTTTTTTAAGGAATATAATGGGTTGAAATGATCCTATATTTTATTTGGATGGAGCAATCAAAATGGGTTGTCTGGATACAATTACCTCGCACCTTAGTTGATGAGGTTACCTCTTATAGTCTACAAACTACAAGATAATATTTCTACATGATAATCATACTATTTAAAAATAAAATACCATTCATATACTATATTTGAAAATAAAATACAAATAACACGCATAATATGCTCTAGCAGCTTCATTTCTACAGCCCTAGGCCTGAGCACTCGTTCACTGCAGCCAAGATCAGTGGAGGCTTTGGGATTTCAACATATTGGACAAGCCACCAAATGATAAACAGTACCGGCAGTTACAATCATGCATAATTAGTGCACAGTCAAAATTTCAACCCATACATATAGAGTCTAAGCCAAACATAATAAGAAGTTCAAGTCATACACATAATAGTAAATTAAGTCTTACACGTAATAGCAAATTTAAGTATTGCACCTACTAGAGAGATCACTGCCTTAAAAATATTGGCAGTATAAGTCATACATTAACATAGGCCAACCGGCAACACATAATACCAAAAGAACTATCCAACTCATCCAACAAAGCTACATTGATCCAAGAAACTTATCATTATCATTAATGAACATAGCAACCCAATGTATCTTGTTTTCAAATGGAAGTCTATCAAAAGCTCTAGCAATGTGAGGGTTGGCAACCAAATGAGCATAGTAAACAGATATGTGGATCTCCTCAAACCCAGGAAGGCAGGCTTTTCAAGGTGTCAAATAAACCATCTGGCAGTTTTCACACATTCTCGAGAAAAACAGATATGCACAGATCTAACGAAATCCTCATGCAATGTTTAGGGTATTTTTACCGTAGAGAATGGGAACCCCGATCTGCGGTCGGTGGTTACGAATGGAGGAGATGAGGGTGAGCAGCTACCGGCAAGAGAGGAGGCACCACCACCCCTGCTCGTGCCCTGCTTGTGTGCCGGCTCAACCCTTCTACCGCCGCCGCCTCATCCCCGCGCGCCAGCTCGCCCGCCCACGCTCGCGCCGCCGCCACCCCGTGTCTCCTGTTGCTAACCCTAGAACAGACTGAGAGGAGATAAGAACAAAGGGGAAAAAAAGAGGTGAGACGCTTTTGTCTTACTGCGCGTGAGGCATGAGTCACTTGTGCGGAGGTGGGATCGTTTCGTCCGCCACTTTTTTTCCGGACGAGCCTGTCCCAAATATTGAAGGGATATTCTCTTTTGGAGCCATCCTATCCCTCCTAGTCTCTCAACTAAACAGATGCAAAAATGGGATGATCCCATCCCATCCCGGGATATCCTCCCAACCAAACACATGCTATATTTATATACATGTTGGTGGAAAAATTACGAAAATATACTCTTAAATTCTTTTTCCCCTCAGGTACCTGGACCTCTCGGAGAACAGCCTGAACGCTAACGACTCCGAGCTCCCGGCCACTGGGTTCGAGCGGCTCACCGAGCTCACCCACCTCAACCTCTCCTACTCCGACTTCACAGGAAACATACCACGCGGGATACGGCGGCTCAGCAGACTGGCGTCTCTCGACCTGTCAAACTGGATCTATCTCGTTGAAGCAGACAACGATTACTTCCTCCCGCTCGGCGCAGGGCGGTGGCCCGTCGTCGAGCCAGACATCGCATCGCTGCTCGCCAACCTCAGCAACCTGAGAGCGCTCGATCTGGGCAATGTTGACCTGTCCGGCAATGGCGCGGCATGGTGCGATGGATTGACCAACTCCACTCCTCGGCTCGAGGTTCTCAGGCTCAGAAACACCCACCTCGATGCTCCGATCTGCGGATCGCTGTCCGCCATTCGCTCCTTGGTCGAGATCAACCTGGAGTTCAACAAACTGCACGGCGGAATTCCGGATTCCTTGGCTGATCTGCCTTCCCTCGGTGTTCTTAGGCTCGCCTACAATCTCCTCCAAGGGCCATTCCCGATGAGGATATTTGGAAACAAGAAGTTGAGGGTCGTTGATATCAGCTATAATTTCAGACTGTCCGGTGTGCTGCCCGATTTCTCATCGGGTAGTGCTCTGACTGAGCTGCTCTGTAGCAACACTAACCTGTCTGGTCCCATCCCGAGTTCTGTAAGCAATCTCAAATCCTTGAAGAGTTTGGGTGTTGCAGCAGCTGGTGACGGTCACCGAGAAGAGCTTCCCTCTTCAATTGGTGAGCTCAGGTCCTTAACATCGTTACAGCTTTCTGGGTCTGGCATAGTAGGAGAAATGCCTTCTTGGGTTGCGAATTTGACTTCTTTGGAAACTCTGCAATTCTCCAACTGTGGCTTATCTGGTCAACTGCCTTCATTCATGGGTAATCTCAAGAACCTAAGTAACTTAAAATTGTATGCATGCAATTTTTCTGGTCAGGTACCTCCACATCTATTTAATCTAACTAATTTGGAAGTCATAAACCTTCATTCCAATGGTTTCATTGGCACAATCGAACTCAGCTCGTTCTTCAAATTGCCCAATCTATCAATACTGAATCTTTCAAACAACAAACTTTCTGTACAAGTCGGGGAACATAATTCTTCATGGGAACCCATCAATAATTTTGACACTCTATGTCTAGCATCTTGTAATATATCCAAGCTCCCTGATACCTTGAGGCACATGCAATCGGTTCAAGTTCTTGACTTTTCAAGCAACCACATCCATGGCACTATACCTCAGTGGGCATGGGATAATTGGATCAACTCGCTCATCCTGATGAACTTGTCACACAACCAATTCAGTGGTAGTATAGGATATGGCTCTGTCATTTCAGATGGTATGTTTGTTATTGATATCAGTTATAACCTATTTGAAGGTCACATACCTGTACCAGGACCACAGACCCAACTGTTTGATTGCTCGAACAATCGATTTTCATCCATGCCATCCAATTTTGGTTCTAATTTAAGCAGTATTTCCCTTCTCATGGCTTCCAGCAACAAGCTGTCCGGAGAAATTCCACCATCGATTTGTGAAGCAACAAGCCTTTTGCTCCTTGATCTCTCCAATAATGATTTTCTTGGCTCCATCCCTTCTTGTTTAATGGAGGATATGAGTGACCACCTGAATGTATTAAACTTGAAAGGAAATCAACTTGGTGGAAGATTGCCAAATAGCCTAAAGCAAGATTGTGCATTTGGGGCATTAGATTTTAGTGACAATCGGATTGAAGGGCAGTTACCCAGATCTCTAGTTGCTTGCAAAGACTTGGAGGCTTTTGATATCAGAAATAATCGTATTGATGATACATTTCCATGTTGGATGAGTATGCTTCCTAAACTTCAAGTCCTTGTTCTGAAATCCAACAAGTTTGTTGGGAATGTGGGGCCTTCTGTTTCTGGAGATAAAAATAGCTGTGAGTTTATAAAACTTCGAATTTTTGACTTGGCTTCAAACAATTTCTCTGGACTATTACAAAATGAATGGTTTAGAACAATGAAATCCATGATGACTAAAACTGTCAATGAGACGCTGGTCATGGAAAATCAATATGATCTACTTGGCCAAACATACCAAATTACCACTGCCATCACATACAAAGGGTCTGATATTACTTTTTCGAAGATATTGAGGACAATTGTAGTCATTGATGTTTCGGATAATGCGTTCTATGGTGCCATTCCCCAGTCTATTGGGGACCTAGTTCTACTTAGTGGGGTAAACATGTCACATAATGCCCTCACTGGACTGATCCCATCTCAGCTTGGCATGCTACATCAACTTGAGTCGCTCGACCTTTCTTCAAATGATCTTTCAGGAGAGATTCCACAAGAGTTGGCATCACTGGACTTCCTTTCAACATTGAATATATCCTACAATAAGTTGGAGGGAAGAATACCCGAGTCTCCCCACTTCTTGACATTCTCTAATCTCTCATTTCTAGGAAACATGGGTCTCTGTGGACTTCAGCTGTCCAAAGCATGCAACAACATATCATCAGATACGGTTCTACATCAATCAGAGAAGGTGTCAATAGACATTGTGTTGTTCCTTTTTGCCGGACTCGGATTTGGTGTTGGATTCGCAATTGCAATTCTCTTAACATGGGGAACCTCAAGGAGCTTGTCCTTAGCTTTACAGACTGTCGCAATGAGCTACCAGGGCAATGCTCTGTCTTCCACTCGTCCAGCTACTTCACCTAACCAATTACAGTATCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015293