Os12g0633600

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Revision as of 10:38, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0633600| Description = Protein of unknown function DUF221 domain containing protein| Version = NM_001073884.1 GI:115489729 GeneID:4352878| ...")
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Gene Name

Os12g0633600

Description

Protein of unknown function DUF221 domain containing protein

Version

NM_001073884.1 GI:115489729 GeneID:4352878

Length

5917 bp

Definition

Oryza sativa Japonica Group Os12g0633600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:27380963..27386879

Sequence Coding Region

27381309..27381617,27381768..27382001,27382320..27382595,27382746..27383022,27383311..27383609
,27383706..27383900,27384235..27384444,27384538..27384601,27384879..27385025
,27385267..27385547

Expression

GEO Profiles:Os12g0633600

Genome Context

<gbrowseImage1> name=NC_008405:27380963..27386879 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:27380963..27386879 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaatcagcggacttctgacctctgctggcatcaatatcgctctttctgtgctgtttatatcgctctattctgttctgaggaagcagccagccaatgtcagggtctactttgggaggaggattgccgaggagcataatcggctccgagaagcttttatcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgaggaagagatcttggctgctgctgggctagatgctgttgttttcaatagaattctagtattcagcttacgcatcttctctctagctgccattctgtgtgtgtttggaattctaccactgaactactttgggcaagatatacatcatgttcggattccttcagaatcattggatatctttacaattgggaatgtgaaagtgagatcaagatggctttgggtccattgtgtagccttgtacataatatcaggagtagcttgcattctcctatatcttgagtacaagcacattgctaggctgaggctccgtcatcttacttgtgcaatgcccaatccaagccattttactgtccttgttcgtggaataccaaaggaaaccaaagaatcatgcagtaatgctattgatgatttcttcaccaagtaccatggatcaagctacctgttccatcaagttgtttacaaagttggaaaagttcagaagataatgactggtgctaagaaggcatacaggaaattcaaacattttacagacagcactattgatcagaggtgtcgagcaatttcataccggtgctgtctgtgcggagcctcatctaattctttccagctgttggcaactgggcttgagcagaatcaggggaaatctgaccttcaagattccagcttgaaactagatgatcaggaatgtgcagctgcttttgtatatttcagaactcggtatgctgctcttgttgcctcagaaatactccaaacatctaaccctatgaaatgggttactgatctagctccagaaccagatgatgtgtattggtcaaatctttggctaccttataagcagctttggattcgccgaatagctacgctccttggttcaattgtttttatgttattctttctgataccagtgacatttatacaaggactatctcagctagagcagttgcagcagaggcttcctttcctgaaggggatactggagaagaaatacatgagccagcttgtaactgggtaccttcccagtgtcatactgcaaatatttttatatgccgttgcaccgataatgatattattttctacattagaggggcctatatctcacagtgaaaggaagaggagtgcttgctgtaaagtgctgtacttcactgtttggaacatattctttggaaatgtactatctggtactgtcataagccaattgaatgtgttatcaagcccaaaggacatccctgtccagcttgctagagctatacctgtccaggctaccttctttatcacctatgttctgacatcaggatgggccagtttatcatctgaacttatgcaattatttggtttaatatggaactttgtgaggaaatatattctacgtatgccagaagacacagagtttgttccctcattcccatatcacacagaagtgccaaaagttttgctgttcggactactgggcttcacatgctctgtactggcacctttgatcttaccttttctgttagtgtacttcttccttggttacatcgtgtaccgcaatcagttgctcaatgtttaccgcacaagatatgacacagggggtttgtactggccaatcgcacacaacgcagtgatattctctctcgtgctcacacagattatctgccttggtgtatttggcctgaaagaatcaccagtagctgcaggcttcaccatacctcttatcatcctcactctgttattcaatcagtattgcagaaatcgacttctcccattattcagaactaccccagcacaggatttaattgacatggacagggaagacgaacggtcaggaagaatggatgaaattcaccaccggcttcattctgcctattgtcagttccacgacactgaagatatacccttggagaaaattcagactgtcgggagcgatgaggaacaagggtgtagctctgataagtcgaatggaaaagaaagcttcgaggaacccagagcggagttgtctcacccaacactgaatggactcccagttagccgtcttcggcatgctgtgaagtcgattactttccttgtcagattgcagaaaagaggtttgtcagaatag</cdnaseq>

Protein Sequence

<aaseq>MKISGLLTSAGINIALSVLFISLYSVLRKQPANVRVYFGRRIAE EHNRLREAFILERFVPSTGWIVKALQCTEEEILAAAGLDAVVFNRILVFSLRIFSLAA ILCVFGILPLNYFGQDIHHVRIPSESLDIFTIGNVKVRSRWLWVHCVALYIISGVACI LLYLEYKHIARLRLRHLTCAMPNPSHFTVLVRGIPKETKESCSNAIDDFFTKYHGSSY LFHQVVYKVGKVQKIMTGAKKAYRKFKHFTDSTIDQRCRAISYRCCLCGASSNSFQLL ATGLEQNQGKSDLQDSSLKLDDQECAAAFVYFRTRYAALVASEILQTSNPMKWVTDLA PEPDDVYWSNLWLPYKQLWIRRIATLLGSIVFMLFFLIPVTFIQGLSQLEQLQQRLPF LKGILEKKYMSQLVTGYLPSVILQIFLYAVAPIMILFSTLEGPISHSERKRSACCKVL YFTVWNIFFGNVLSGTVISQLNVLSSPKDIPVQLARAIPVQATFFITYVLTSGWASLS SELMQLFGLIWNFVRKYILRMPEDTEFVPSFPYHTEVPKVLLFGLLGFTCSVLAPLIL PFLLVYFFLGYIVYRNQLLNVYRTRYDTGGLYWPIAHNAVIFSLVLTQIICLGVFGLK ESPVAAGFTIPLIILTLLFNQYCRNRLLPLFRTTPAQDLIDMDREDERSGRMDEIHHR LHSAYCQFHDTEDIPLEKIQTVGSDEEQGCSSDKSNGKESFEEPRAELSHPTLNGLPV SRLRHAVKSITFLVRLQKRGLSE</aaseq>

Gene Sequence

<dnaseqindica>5263..5571#4879..5112#4285..4560#3858..4134#3271..3569#2980..3174#2436..2645#2279..2342#1855..2001#1333..1613#atttgattttgcaataactcctgggggcttcttcccttccactctcgtctcgtactctctccaaacccaaatcaaaaccaaaccaaaatcgaaaccaaatcgaaaaagcgagagagagagagaggaaaaagtttggattcatcatccccttcttcttcttcctcctctcgcctcgcctcgtctcgtctgctccaatccagtccgcatctccccgccattgccgccgccgcggccgcgcttaatttaacccactcccactcctcgtcgccgtggtaatctgctctcctgctgccttttttttttttgctgctttgtgctgcttcgttggttgatttccttctcattctattggggtttcacttaatggcggcgcagggctccaccgaggcggcggcggttgctgtgttgcgccggcgagcgggcggtcgacttggaggcaagttaatctcgcctcctccttcgtcttctctacttgttcgttttagttcgtcggatttactacgcgttggtttagacagaaatttcagttgttaatccccgttctttgtccatcgatttcggagttggattctgttccttctcttgctgcggttgcggttaatctgttaatgggggaggagtcgcggttaatgcgatgtagtagtaattttctgcttggtttctatactaagcctgcagggtcaggtagagttgcagtttgcaggcaatccgctttctgtcgcgtggtgttgtggtgatgcggatgctcacacgcaaacaccggttccaaccatcgaatctaaacccaacctgttcagacagcttggattcctctatttgcagccttgcagccaacgatgttgacgcctcttgcatcgtgttcttctttttaattaactactccacttggtagtagaataatatataagcagccctcatgtcatttgggcacatgacattgcatctggagtgttctacatgctaccactactttttgttttagccaattaattactacttattatctccaaggttccactgtccgtacacccactccgaggaattggcttcattctcaaatctgattttaccttggtgccacttttggaatgtgcgtttgtttattcatggtgtagaaataggcagtgatgatgttatctgttgttttgctatctttcttttttctctttctctttgtggagattacagaatttgcagcgatttgtacttgcaggattgatttgatttgctttagcgatctcttcctgcaggtgctgagcctctgggtaccaaggatgaaatttgtgcttgtatttggatgacataagcgcgccacgcacttgctaggaaggaatgaaaatcagcggacttctgacctctgctggcatcaatatcgctctttctgtgctgtttatatcgctctattctgttctgaggaagcagccagccaatgtcagggtctactttgggaggaggattgccgaggagcataatcggctccgagaagcttttatcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgaggaagagatcttggctgctgctgggctagatgctgttgttttcaatagaattctagtattcaggtatttttacttccctgtattgtttatatattattagaaggtggtatctgattgctgagtttttaaacttcaatatgggcatgaatcagaaggagaagaaaatttgtagctgtataaagcataagttcctgacttgttgtaatgcacagtagcacatcccctgtcttttatttaaagatttatattccttattttttacctctatccaaatttacatgctaatacatttgtttttcaacagcttacgcatcttctctctagctgccattctgtgtgtgtttggaattctaccactgaactactttgggcaagatatacatcatgttcggattccttcagaatcattggatatctttacaattgggaatgtgaaagtgagatcaagatggtgagatgagaaacttcttgtagttttactacagggtagtttaaccaatgttctacatgacatttacgcctcttgagtgctggcatttagagaactccctccgctctcaaatagacgacattttagaatgtgtgcaatcaaatcactaataaatgcaaaaaaaaaaagacatgtgaaaatagatttgtcatcaaaagtactttcatagaatcaataatttcttctttttttttttttttttgagaaagatatgatttatatgccggttgcattgcaggctttgggtccattgtgtagccttgtacataatatcaggagtagcttgcattctcctatatcttgtaaggcctttttctcttaggagtaattgaaacattctcattcctcatattgaggagtagatttgatataacattatttgtctgataatttaggagtacaagcacattgctaggctgaggctccgtcatcttacttgtgcaatgcccaatccaagccattttactgtccttgttcgtggaataccaaaggaaaccaaagaatcatgcagtaatgctattgatgatttcttcaccaagtaccatggatcaagctacctgttccatcaagttgtttacaaagttggaaaagttcagaagataatggtaaaatctgcactcgaagggatgagctgcatataaatttgaacatattgtaataaagaatattgctgattgtttattgggaattttaaaagacggccttgatagttgttgtcatttgatattaattttgggtctactatcttgtagttgggtaatcactgggggaaacaagcaaaacctatcacattcttcccactaatttgattctcagctctgtgcttttatatagagtagtgttcattaatctccggttccttgaattgaatttatggctttgcatatttttatttcactttcttcttattgtgtaacaattctagtcatattctggcagactggtgctaagaaggcatacaggaaattcaaacattttacagacagcactattgatcagaggtgtcgagcaatttcataccggtgctgtctgtgcggagcctcatctaattctttccagctgttggcaactgggcttgagcagaatcaggggaaatctgaccttcaagattccagcttgaaactagatgatcaggttgaacttgtaatctcacaaatattagctcttttactggtagttcgtcaattagtcagtataaaaccagtaactttaactgttgaattgtaccaggaatgtgcagctgcttttgtatatttcagaactcggtatgctgctcttgttgcctcagaaatactccaaacatctaaccctatgaaatgggttactgatctagctccagaaccagatgatgtgtattggtcaaatctttggctaccttataagcagctttggattcgccgaatagctacgctccttggttcaattgtttttatgttattctttctgataccagtgacatttatacaaggactatctcagctagagcagttgcagcagaggcttcctttcctgaaggggatactggagaagtaagtatacatgttaaaatggaaccaatctcttgttattacaaagcttgttcttatttgtagtgcgaatcgtatctcatgtatatatatatattttaaaagtgaggccctattcttgtgattagaccaattaatttaacatgttctgcagttagtcaattcaaatgtgtaaaggaacacagtttgatgtttccttttctcttgtgttgctgaggcaatatttaatgtagaaatacgggcttctattcatttctatgcagcatctactgagtactctttcgtgtgcaggaaatacatgagccagcttgtaactgggtaccttcccagtgtcatactgcaaatatttttatatgccgttgcaccgataatgatattattttctacattagaggggcctatatctcacagtgaaaggaagaggagtgcttgctgtaaagtgctgtacttcactgtttggaacatattctttggaaatgtactatctggtactgtcataagccaattgaatgtgttatcaagcccaaaggacatccctgtccagcttgctagagctatacctgtccaggtaaatattgtccaaacacctttttgtctttgtgcttcagaagatatgaatagtttggagtacatgatgaaaggtttctccaaaaagatactgtttttgtcccttagtttttttcttaacttctctctgctattctgtaaatattttcaggctaccttctttatcacctatgttctgacatcaggatgggccagtttatcatctgaacttatgcaattatttggtttaatatggaactttgtgaggaaatatattctacgtatgccagaagacacagagtttgttccctcattcccatatcacacagaagtgccaaaagttttgctgttcggactactgggcttcacatgctctgtactggcacctttgatcttaccttttctgttagtgtacttcttccttggttacatcgtgtaccgcaatcaggtgaggaacctcttcatttctacttggagtattatatgttcataacatatttttattctcaaatatgaatatcttcatcaatgaatattttattatgttgcaaattgtaaccgtggtggtgaacattttttacatgaaccttactgcaccattatatttgttgagtagctcgcactgtttcatgcaattaaatttggaaagaaaattgcatgttcttgtaaaaaatgtttactgaaatagtatttcttatttcttagcttcattcttcaaccctattatttccccatgctaatgatattctattcgtggtgttttcagttgctcaatgtttaccgcacaagatatgacacagggggtttgtactggccaatcgcacacaacgcagtgatattctctctcgtgctcacacagattatctgccttggtgtatttggcctgaaagaatcaccagtagctgcaggcttcaccatacctcttatcatcctcactctgttattcaatcagtattgcagaaatcgacttctcccattattcagaactaccccagcacaggttcgtattagttccatcatagtgtatagtgatggacttaagtggacaacaaattaaaaaataaccccatggtctccacattctatcattgtggtgactggtagagatttttgctcgtgggtgattgactactgcattttgattgtacaggatttaattgacatggacagggaagacgaacggtcaggaagaatggatgaaattcaccaccggcttcattctgcctattgtcagttccacgacactgaagatatacccttggagaaaattcagactgtcgggagcgatgaggaacaagggtgtagctctgataagtcgaatggaaaagaaagcttcgaggaacccagagcggagttgtctcacccaacactgaatggactcccagttagccgtcttcggcatgctgtgaagtcgattactttccttgtcagattgcagaaaagaggtttgtcagaatagaataggatatctaactactaaccccttcatcagcctgttcagcgatgaaaatgtacagccacatacatcatacaacatacattgagagagcatcaggatacctgaaaagcaattttgttgttttgatccgtttgatttccaagctagtgactctaggacatgctagttaatcagtatattcaagcctttgccatgcagatattgttgtagtgctaggtcattctgttacatgaaatttaaacttgtttctttggtaacctcagctactctgcaactcaattaccctcctcttctaacttcaactcatctgagaatgtaaaactgaaatttccatgcctgttagctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0633600, RefSeq:Os12g0633600