BGIOSGA015302

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Revision as of 04:12, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015302| Description = Os04g0348400 proteincDNA, clone: J100012P20, full| Definition = Oryza sativa Indica Group BGIOSGA015302, complete gene...")
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Gene Name

BGIOSGA015302

Description

Os04g0348400 proteincDNA, clone: J100012P20, full

Definition

Oryza sativa Indica Group BGIOSGA015302, complete gene.

LocusTag

OS04G0348400

Ensembl Transcript ID

BGIOSGA015302-TA

Ensembl Protein ID

BGIOSGA015302-PA

Length

3035

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:14040311..14043345

Sequence Coding Region

14043052..14043345,14040311..14041396

Genome Context

<gbrowseImage1> name=IndicaChromosome04:14040311..14043345 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:14040311..14043345 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGCCGGCGCCGGCGCCGGCGGCCGGGGCGCGGGAGGACGAGGACGCGCCGGCGCTGCGGAGGCGCCTGCGCAGGCTCGTGGCGGCGGCCACCGCCGGCGCCGCCTCGGAATCCGTGTTCGACGAGGCCGCCGCGGCGCTCGCGGCGCTGCGGGATGCGGAGGTCGGCGTCGGGAGGAAGGGCGTCGGAGGAGGAGAGGAGGCGGACGCCGCCGCCGTCCCGGCGCTGTTCCTGTGCCCGATCTCGTCCGGGATCATGAGGGACCCCGTCGTCATCGAGTCCGGACAGACCTATGATCGTCGTTCCATTCAGGAGTGGTTTAGTGCTGGAAACCAGATATGCCCGCAGACTCAACAAGTGCTCTCACACACAATTCTCATTCCTAACCACCTTGTTCGTACCATGATCTCACAGTGGTGCACAGAAAATGGGCTCACTCTGCCAGAAATTGAGAACCAAGAAGAAGATCATGTTACCAACAGTGAGGAGAAAACATTTGATGAAATATTTGTCAAAATAACTTCCTCATCAAGCAGTGGTGGACGGAAGCAAGCAATCAAGGATCTTCGGCTTGTTACAAAACGTAACAGCGAATTCAGAGCTGTTTTAGGACAGAGACCAGATTCCATCGCACAGATGATCATGGCACGGTCCACCCCAGGATTACAAAATGATCCACAAGTATTGGAGGACATGGTAACTATAATTCTCAACTTTTCAATCCATGATAGCAATAAGAAGATCATTGGAGATGATTCAGAAGCCATCCAATTTCTCATATGGGCACTGAAATCGGGAGATATGGGGAGCCGTAGCAACTCTGCAGCTGCCATCTTTACTCTGTCAGCTCTCGACTCAAACAAGGAGAAGATTGGCAAGTTAGGGGCAATGGATCCTTTGATTGATCTCCTTGAACATGGAAGCATCATAGCGAAGAAAGATGCGGCATCTGCGATTTTCAGTCTTTGTCTGCTCCATGAGAACAGGTCAATAGCCGCAAGGAGCGGAATTGTCGATGTGGCGATGAGAGCCATCGATGATCAGTCCCTTGTTGAGGAGTCCTTAGCTATACTTGCTTTGCTATCAAGAAATCAAGAGATGGTGGAGATCATCACCGAGTTCAACGGTACCGCTTCCATGCTCCGTTCGATAAGGGAGAGTGAGTGCAAGCGCAGCAAAGAGAACGCGATGGTAGTTCTCTTCGCTATATGTACATACAACAGGACAAAGCTGAAGGAGGTCGAGGCAGATGAGAGCATAAACGGCTCCCTCACTTTTCTCGCACAAACTGGCACTCAAAGGGCAAGGAGGAAAGCTTCTGGGATCCTTGAGAAGATGAAGAGGACGATGCACAATAGGCATTGTTCATGTTAG</cdnaseq>

Protein Sequence

<aaseq>MAKPAPAPAAGAREDEDAPALRRRLRRLVAAATAGAASESVFDEAAAALAALRDAEVGVGRKGVGGGEEADAAAVPALFLCPISSGIMRDPVVIESGQTYDRRSIQEWFSAGNQICPQTQQVLSHTILIPNHLVRTMISQWCTENGLTLPEIENQEEDHVTNSEEKTFDEIFVKITSSSSSGGRKQAIKDLRLVTKRNSEFRAVLGQRPDSIAQMIMARSTPGLQNDPQVLEDMVTIILNFSIHDSNKKIIGDDSEAIQFLIWALKSGDMGSRSNSAAAIFTLSALDSNKEKIGKLGAMDPLIDLLEHGSIIAKKDAASAIFSLCLLHENRSIAARSGIVDVAMRAIDDQSLVEESLAILALLSRNQEMVEIITEFNGTASMLRSIRESECKRSKENAMVVLFAICTYNRTKLKEVEADESINGSLTFLAQTGTQRARRKASGILEKMKRTMHNRHCSC</aaseq>

Gene Sequence

<dnaseqindica>1..294#1950..3035#ATGGCGAAGCCGGCGCCGGCGCCGGCGGCCGGGGCGCGGGAGGACGAGGACGCGCCGGCGCTGCGGAGGCGCCTGCGCAGGCTCGTGGCGGCGGCCACCGCCGGCGCCGCCTCGGAATCCGTGTTCGACGAGGCCGCCGCGGCGCTCGCGGCGCTGCGGGATGCGGAGGTCGGCGTCGGGAGGAAGGGCGTCGGAGGAGGAGAGGAGGCGGACGCCGCCGCCGTCCCGGCGCTGTTCCTGTGCCCGATCTCGTCCGGGATCATGAGGGACCCCGTCGTCATCGAGTCCGGACAGGTGAGTCCGCCGACGAGCACCTCACCTCACCTCCATTAATTCTTTGCTTCATTTCAATTGTTCTTGGTCCCTTCGTTCGATTGAATGCGCCGTCGGTGCCAACAATCCTGCGGCTCACCTCGTAAACGCGGTCAATTTCTGCTCTCGATCGGCTACCACCCACCAAGCATTCTTTCATTCAGTTCTTGGGCAGCAGCACAAACGTCGTGGTCTGTTCTTGCGTTAGTTCGATTCAACCAACCGCGCCGCATTTGGTGAACGATTAACGCACTGTTCGTCCCTCGGAATCCGTATACGTGGTTCGTCCTGTGTGAAATCGATGGTACTTAGTACCTTTTTTTCCCGCCGGGAGTACATCAAAACATGATTGCTGCCGATTCTTGCTCCAATCAGTGCGAAGATGTGGCGTGTTTGGGGCTTCCAAATTGTTAGGTTCTTTTGTCTGTTTACCACTGTTTGTGGTTACAGCAAATTTGTTAGTTGGAAGCTATTGAATATGTGGTGGTCAACAGAAGAGCTGTTTGTAGCTGTACTTGACAATGCCTTGAGTAGGTAAAGCTGCAGAGCAACTGCAATTGTCACATTTGGTACATTTAGAGGTCCCTAATATTAGGATCTTAATTATATTTGTTTAGTACAGTTTGTTGCTAGTACAGGAAATTGAAAGCGGTACTCTCTCGGCGAATGTTTAATTCATGATTGATGGTAGATCTGCGTGGATATGGAGGGATTAGTACCTGTAATCCACATTTCCAATTTTAGAATAGTTTTAATTCGTTCTTTGGAGTATGCGAATCGAAGAGTTTCAATTTTCACATTTAATTGCTGTTGTGCATGTGATTCCCGTAAAAGATTCGGATGTTTTAAAGATGGATTTGGTTCCATTTAAGCCCTGTAATTATCACATAATGGAGTTGGTTTGCTTTCTTTACATGCGAAACGTGTGAATTGAATGGTTATTGAGGAAAAAAAATTTATGTCTAGTACTTGTTTGGTAAGTATTAGTTACGGTATTGTCTTATACATTCACTCCACAACACGCAGAATTACCTAAAGGTTTAGCATGGTTTCCGTTGCTTCATGCATAAATGAAGGAGATATGTATGTTTTAAACGCTGAAATTTTCATAAGTGAATGTAGCACTTTGCATGCGTTCCAAAAAGCAAATTTGGCCATTGTATTGACCAATATTTGTTAGTATGAAAATTTTATGAAATTATATACTATGGCATTGGTACTTATATGAAGTTACAGTACGGCATACTGATTGTACTGGAATTAATAACATTATGACATACATTTGGATCGTGTAGTGTGAAGTCTGGATCTTGTATATTATTTTGGCTAGTCAGTTCCATGCTATTTGTGTGTTTTCTGTCACTACTTTCCTTTATGAGTACCGAGGCGAATTTTTACTGTTTAAATATGCTGATATGATGAAGTTTTCTAAGAATATGGAGCAAAATAGTAAGTCAACAAATATGGTAAGGAAATAGCTACGTATAACTTGACGACATTGGGGGGAAATCGCCAGAGTTAATAAACAAGTGGATGGTTTCGAAGTGTTAGGTTTAAATTTGACATCGCCACATTAACAACTAGGACAAGAACCTAGAGACGTTATCCAACTGATCTTTATTTCTTGTTCCATGCAGACCTATGATCGTCGTTCCATTCAGGAGTGGTTTAGTGCTGGAAACCAGATATGCCCGCAGACTCAACAAGTGCTCTCACACACAATTCTCATTCCTAACCACCTTGTTCGTACCATGATCTCACAGTGGTGCACAGAAAATGGGCTCACTCTGCCAGAAATTGAGAACCAAGAAGAAGATCATGTTACCAACAGTGAGGAGAAAACATTTGATGAAATATTTGTCAAAATAACTTCCTCATCAAGCAGTGGTGGACGGAAGCAAGCAATCAAGGATCTTCGGCTTGTTACAAAACGTAACAGCGAATTCAGAGCTGTTTTAGGACAGAGACCAGATTCCATCGCACAGATGATCATGGCACGGTCCACCCCAGGATTACAAAATGATCCACAAGTATTGGAGGACATGGTAACTATAATTCTCAACTTTTCAATCCATGATAGCAATAAGAAGATCATTGGAGATGATTCAGAAGCCATCCAATTTCTCATATGGGCACTGAAATCGGGAGATATGGGGAGCCGTAGCAACTCTGCAGCTGCCATCTTTACTCTGTCAGCTCTCGACTCAAACAAGGAGAAGATTGGCAAGTTAGGGGCAATGGATCCTTTGATTGATCTCCTTGAACATGGAAGCATCATAGCGAAGAAAGATGCGGCATCTGCGATTTTCAGTCTTTGTCTGCTCCATGAGAACAGGTCAATAGCCGCAAGGAGCGGAATTGTCGATGTGGCGATGAGAGCCATCGATGATCAGTCCCTTGTTGAGGAGTCCTTAGCTATACTTGCTTTGCTATCAAGAAATCAAGAGATGGTGGAGATCATCACCGAGTTCAACGGTACCGCTTCCATGCTCCGTTCGATAAGGGAGAGTGAGTGCAAGCGCAGCAAAGAGAACGCGATGGTAGTTCTCTTCGCTATATGTACATACAACAGGACAAAGCTGAAGGAGGTCGAGGCAGATGAGAGCATAAACGGCTCCCTCACTTTTCTCGCACAAACTGGCACTCAAAGGGCAAGGAGGAAAGCTTCTGGGATCCTTGAGAAGATGAAGAGGACGATGCACAATAGGCATTGTTCATGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015302