BGIOSGA015322

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Revision as of 04:12, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015322| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015322, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA015322

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015322, complete gene.

LocusTag

OSJNBB0062B06.5

Ensembl Transcript ID

BGIOSGA015322-TA

Ensembl Protein ID

BGIOSGA015322-PA

Length

4564

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13561247..13565810

Sequence Coding Region

13565567..13565810,13564694..13565072,13563707..13563925,13563119..13563254,13562567..13562815
,13561247..13561540

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13561247..13565810 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13561247..13565810 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGAGAGGGCTGAAAAGCTGAAGGACGATGTCCGCACAATGTTTGAGACATGCGACAGCACAGAGGGAAGGTTGCAGTTAGTAGATGCAATCCAACATCTCGGAATAGATCACCTCTTCAAAGAAGAGATAGAATACTCACTAAGTGAAATCAATGCAAGTGAATTCATTAGCTCTAGCCTCCATGATGTTGCTCTGCGGTTTCGTTTGCTTAGGCAGCATGGCTTTCATGTATCTCCAGATGTATTCAACAAATTCAAAGGCGATGATGGGAGGTTTGTTAGTGGAATAACTAATGACCCAAGGGGCTTATTAAGTTTATACAACGCAGCCCATCTTCTCACACACGATGAGCCAGAACTTGAAGAAGCCATCTCTTTTGCAACGCAACATCTTGCATCATTGAGTAGTGGAACTGATCTCAATCCACATCTAATTGATCAAATCAATCGTGCCCTTGATGTACCATTACCAAGGACGTACAGAAGAATGGAAACTTTGTGCTATATGCCGGAGTATAGACAAGAAGAAGGGCACATTCCCATTCTTCTAGAACTTGCAATGCTGGATTTTAACCTTCTGCAGCATGTCCACTTAAAGGAGCTTAAAGCTATTTCTGAGTGGTGGAAAGATCTTTATGGATACATGGGTTTAAGTTACATTAGGGATCGCGTGGTGGAGTCCTACGTTTGGTCCTATGTTGTGTTCTACGAGGAAGACTCAGCGCTTGCACGAATGATCTTTACCAAGATAATTGCATTCATAATCCTTATGGATGACACTTATGATTCCTATGCCACGATCCAGGAATGCAGGAAGCTGAATGAAGCCATCCAAAGATGGGATGAGAGCGCTACCGCATTCCTACCAGAATACATTAAGAAGTTCTACAGTGCACTGTTAAAAACCTTCAAGGAGTTTGAGATTCATGTGGAGGATGATGGCCAATACCGAATTGATCACACAAAAAAAGCTTTCCAAAATCTATCTGCTTATTATCTTCAAGAAGCGGAATGGTCATATCAGAATTACAAGCCAAGCTTTGAAGAGCAAGTGGCTTTGTCTACGGTAACCTCAACCGTGCCACTACTATGTGTGTCTACTACAGTCGGTCGAGGTGATGCACTAACGAACGAAGCATTTGAGTGGGCAGCAAATGATATTGGTGCCAAAATAGCGTGTGCAAAGATAACACGTTTCATGAATGACATTGCGGCATTTAAGCGTGGAAGAAAGAACAGGGGGGACGTGGTGAGCACAGTGGAGTGCTACATGAATGAGAACAAGGTCACAAGCGAGGGCGCCTTCACCAAGATCGACTTGATGATAGAAGATGAATGGAGGACGATCAACCAGGCTCTCTGTGAACATCGTGAGCTCCTCCCAGCAGTGCAACAAGTGTTGAATTTAGCTATTTGCGCGACATTCTTTTACGGGAAGAGAAAGGACGCCTACACATTCTCCACACATCTTCAGGAGACAGTTGAGAGTCTCTTTGTTAGGCCAGTTTCTATCTAG</cdnaseq>

Protein Sequence

<aaseq>MVERAEKLKDDVRTMFETCDSTEGRLQLVDAIQHLGIDHLFKEEIEYSLSEINASEFISSSLHDVALRFRLLRQHGFHVSPDVFNKFKGDDGRFVSGITNDPRGLLSLYNAAHLLTHDEPELEEAISFATQHLASLSSGTDLNPHLIDQINRALDVPLPRTYRRMETLCYMPEYRQEEGHIPILLELAMLDFNLLQHVHLKELKAISEWWKDLYGYMGLSYIRDRVVESYVWSYVVFYEEDSALARMIFTKIIAFIILMDDTYDSYATIQECRKLNEAIQRWDESATAFLPEYIKKFYSALLKTFKEFEIHVEDDGQYRIDHTKKAFQNLSAYYLQEAEWSYQNYKPSFEEQVALSTVTSTVPLLCVSTTVGRGDALTNEAFEWAANDIGAKIACAKITRFMNDIAAFKRGRKNRGDVVSTVECYMNENKVTSEGAFTKIDLMIEDEWRTINQALCEHRELLPAVQQVLNLAICATFFYGKRKDAYTFSTHLQETVESLFVRPVSI</aaseq>

Gene Sequence

<dnaseqindica>1..244#739..1117#1886..2104#2557..2692#2996..3244#4271..4564#ATGGTGGAGAGGGCTGAAAAGCTGAAGGACGATGTCCGCACAATGTTTGAGACATGCGACAGCACAGAGGGAAGGTTGCAGTTAGTAGATGCAATCCAACATCTCGGAATAGATCACCTCTTCAAAGAAGAGATAGAATACTCACTAAGTGAAATCAATGCAAGTGAATTCATTAGCTCTAGCCTCCATGATGTTGCTCTGCGGTTTCGTTTGCTTAGGCAGCATGGCTTTCATGTATCTCCAGGTATCAATCTCTATTACAAATTTTGAACTAGGAGTTTATCGTACTTGCATTTTACCTATTTCGGACATAGCCAAGACATTTTTTTATCATTTTGTAGCAGTTCATTAGAATTGCATTTATCATTTTAGGTCACAATCACAATGTTTTTCTTTATTGATCCAAAACAAAACATCAGAACACAAACAAATAGAAATGTATATTGAAATGAAGCTGGAAGTTATGGAGCCTAGAAAAAAAAACTATTCAGTTTAACACCCACAATCTAAATTAGGGTTGTTTTGTCTCCCATGTATATGGCACTGATATGCCACTTATGATAATTTAGGTAGGTTCGTGCTAAATAGTCACTTAAAATCGTTAAATGGAAGGAATATAAATTGTATTTTTTTCCATATTAAAAGTATTTTTGCTTATATGAAAGGACAAACTTTTCATATAATGGATAGTTAGATCCACTCTTATATTACTTATAAATTAAGCAATATATTTTGCAGATGTATTCAACAAATTCAAAGGCGATGATGGGAGGTTTGTTAGTGGAATAACTAATGACCCAAGGGGCTTATTAAGTTTATACAACGCAGCCCATCTTCTCACACACGATGAGCCAGAACTTGAAGAAGCCATCTCTTTTGCAACGCAACATCTTGCATCATTGAGTAGTGGAACTGATCTCAATCCACATCTAATTGATCAAATCAATCGTGCCCTTGATGTACCATTACCAAGGACGTACAGAAGAATGGAAACTTTGTGCTATATGCCGGAGTATAGACAAGAAGAAGGGCACATTCCCATTCTTCTAGAACTTGCAATGCTGGATTTTAACCTTCTGCAGCATGTCCACTTAAAGGAGCTTAAAGCTATTTCTGAGTAAGCATGTTTCTTATATATATATTTATATCTATGATGTCCTAACAGTACTATAAAAACTTGTGCCGACCCATATTCTCTAAAATCTGAAATTTAATGGAGCTAGGGATTGTTTTGAGATATGATAAGTGCAAAATTATCTTGTAAACACATTTTTGGAGCATTCTAATTTAGCTAGATGTGGAAAGACATTTTTCATGTCATTTACCTCCATAGAGGCATCTTTAGGATCTTCATAGTGGAAAGAAACTTAAAATAACTCAAGAATCCAAGATGTGAGCTAGGTGGATCAGAGTGGGATGTTTTCAATGTCTGGATAATGTTGTGTTCTTGTTTTTTGTGCACGTTCTGTAACATATCAAGAAAACTAACAAGACGACAGCAAGGTGACATATAAGTTTTTATTTCATTATTGTTTTCATTTCACTATTGTTTGCAATGCAGTAGAACTGTTTAATGGCACCATAAAATGCCTCCACCATTTCCTGACAAAAAAGTGAAAAAAATAGAATGCGGCAAGTGTACTCATTTATTAAATGTATCTATTTTTATGAATCTCATAAGGTGCTATAAACTATTGTCTACTGCAATCTAGACAGCACAAACATACATACACTATATAAGTCAAATACCTTTATATTTTAGGAGAAATATATGTTTGATAAGTATGTATTCTCCATATTAATCTGTTGCAATAGTCGATGCTCCTAACTTATCTTCAACAGACTACTAGCATGCACCTAAAATCCTGAATCACTTAAATTTCAGGTGGTGGAAAGATCTTTATGGATACATGGGTTTAAGTTACATTAGGGATCGCGTGGTGGAGTCCTACGTTTGGTCCTATGTTGTGTTCTACGAGGAAGACTCAGCGCTTGCACGAATGATCTTTACCAAGATAATTGCATTCATAATCCTTATGGATGACACTTATGATTCCTATGCCACGATCCAGGAATGCAGGAAGCTGAATGAAGCCATCCAAAGGTTTGTTTAATATGTTAAACTAAGTGAAATATCCTATGAAACTGACCAATTTAGTGACATTAAGAGAACCGCTCCATAAACTATGTTCGATGTTCTAAAAGTTCCTAAAATAGAAGAGGTGATATATAAAAGCATGTCATAATTTAAGATCTAGATCAATCCATTTGATGGATTGAAATTTACAAATAGAGGAGTGAAAAGAGGCAAAACAAAATAAATTGAAGTATTTTTTTTCTGTATTTACCATTGTATTTTATGAATTTCATTTGTACCAAACTGAATCGATTCTGAGCTGAAATGCTGACATGATTGTGTGATATCACCTCTTCTGTGTGAAGTAATTTCTACGTAACTTCTAGAACTTCGGGAGTGTTTCCATGATTTTTCTGCTGAACTATAATGGATATATGCGAATAATTTTAATCCAAATTACAAACTTCCCTTATTTGCAGATGGGATGAGAGCGCTACCGCATTCCTACCAGAATACATTAAGAAGTTCTACAGTGCACTGTTAAAAACCTTCAAGGAGTTTGAGATTCATGTGGAGGATGATGGCCAATACCGAATTGATCACACAAAAAAAGCTGTACGTTTAGTAGCGTTTACTCCCTCATTGTTATATTTATACTGCAAATGTTACTCCTGTATATTGAACTTTTCTTTAACGCAGCCTTCAAATTCTTGGGTTTATGTTGGTTATGTCTGTTAATTTATAGAGTAGTTTTGTCGCACTAATTGCATTTGATTGGGCACAAGAACATAGGAACTAGTACAAACCCCGCATGTTGCAGTGAAAACAAAAAAAAGGTGGACGGCATTTTCTTTTTGCTGAAAACAGCACTATTATATATTGCTAGTATAGTGGCTAATTTCCTTAACATGTATGTAGTTCCAAAATCTATCTGCTTATTATCTTCAAGAAGCGGAATGGTCATATCAGAATTACAAGCCAAGCTTTGAAGAGCAAGTGGCTTTGTCTACGGTAACCTCAACCGTGCCACTACTATGTGTGTCTACTACAGTCGGTCGAGGTGATGCACTAACGAACGAAGCATTTGAGTGGGCAGCAAATGATATTGGTGCCAAAATAGCGTGTGCAAAGATAACACGTTTCATGAATGACATTGCGGCATTTAAGGTACAAGTTAATTACTTGGATTGGTCCTTAATTAGTGAATGTAACATTTTAACAATATAATGCACATCACACTGTTTATTCGTAGAGTTCATAATTTATTCTTCATTTTAAAATTTTTTATCGTTCTAGTTTTGTCCTAAATCAGACATTGCAATCTTTAACCATCAAGTTCATGAAATTTGTGTAGTTTCACATAATAAAATTTATGTTTTTAGATTCACCATGAGCAATACATTCATAGTATATAACTCGCATATTGATAAACTATACAACTTTGTAGAAATTGATGGTCAAAGATATAAATATTTGACATAGGATACAATTATAATGACAAAGAGATTGAATCGGAAGGAGTATTAAGTTTATAACACAAATTGATGAGAAAGGTAGAGATCAACACATATGACATAGACATTGTCAAAATGGAACAGATACCGTACTGATTTATCACATCTACATTACAAAAGTATAAGAGGAGTATAGAATTATTAGTTTGGCCTGCTTTGGAGTATGGAATGCGGAAACATATCCTATGCACACAAGGCTCCTCGTGTGCACACCATACACACTAACTAAAAAGTATCCCAAAAAATTTTAGAAAAACTGTATATGTACTTTTAGTAGTATTATGACAATGTGTAAAGTCTCATTTTCAAATTCGTTATATATTAGGATCAACAAAAAAGATAAAAATATGACAGATTTATACTCTCAAAACTATCATAAAACTATCATAAATTTTATCATTTTTATCATGTTAAGACTTTGCACATAAGTATTTGTACTTTCTTTTCTAGATTTGTTGGTGAAATTTGTTAGTTAGTGTGTACAAGAGAAGCATGTGTGCATAGAATATGTTCCCATTGAATGGAAGAACTTTTCCGTAAAATGCAAGAATTGAATTGAATTTTGTAAAATTCATGAATTCAACATTAACACGAGCACTACTTAGTTACTCTCTAAAACATACTGAAAACAAACATTTCAAAAAAAGTAACCAACTTATGTTCCAAACATGACAAGCAGCGTGGAAGAAAGAACAGGGGGGACGTGGTGAGCACAGTGGAGTGCTACATGAATGAGAACAAGGTCACAAGCGAGGGCGCCTTCACCAAGATCGACTTGATGATAGAAGATGAATGGAGGACGATCAACCAGGCTCTCTGTGAACATCGTGAGCTCCTCCCAGCAGTGCAACAAGTGTTGAATTTAGCTATTTGCGCGACATTCTTTTACGGGAAGAGAAAGGACGCCTACACATTCTCCACACATCTTCAGGAGACAGTTGAGAGTCTCTTTGTTAGGCCAGTTTCTATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015322