BGIOSGA015329

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Revision as of 04:12, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015329| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015329, complete gene.| tag = H0813E0...")
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Gene Name

BGIOSGA015329

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015329, complete gene.

LocusTag

H0813E03.5

Ensembl Transcript ID

BGIOSGA015329-TA

Ensembl Protein ID

BGIOSGA015329-PA

Length

4649

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:13321721..13326369

Sequence Coding Region

13326090..13326369,13325415..13325799,13324661..13324885,13324418..13324553,13323988..13324239
,13321721..13322014

Genome Context

<gbrowseImage1> name=IndicaChromosome04:13321721..13326369 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:13321721..13326369 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATGTAAGCAAGCAGATATCAGAGGAATGGATGAGAGAGAGAGCCAACAAATTGAAAGAAGATGTCTGCGGACTGTTTATTATGGCCTCAAATGGCATCTTGGAGAGGATGAACTTAGTGGATACAATTCAACATCTAGGAATAGATCACCTCTTTCAAGAGGAGATTGACTCTGCACTAAAAGACATCCATGAAAATGATTTAGCTAGCTCTAAGCTGCATGAGGTTGCTCTTCGGTTTCGCTTGCTTAGAGAGCATGGATTTTGGGTGTCTCCAGATGTATTTAACAAATTCAAAGGTGATCATGGCACTTTCAATAACGAATTATCATTAGCCGATGACCCAAGAGGCCTACTATCTTTATATAATGCAGCCCATCTGTTCATACATGGTGAACCAGAACTCGTGGAAGCCATTTCTTTTGCAAGGCACCATCTCGAATCATTCAATCGGCGTAATGTTCTGAAGGCCCCTTTAGCTGATCAAGTCAAGCGTGCCCTTCACTTGCCATTGCCAAGGACACACAGGAGAGTGGAGATGGTATCATACATGTTTGAGTATGGCCGAGAGGATGGGCACAATCCCGTTATTCTTGAACTAGCAAAGCTGGATTTCAACCTACTGCAGCGTGTTCACTTGAAAGAACTCAAGGAAATATCTAGGTGGTGGAAAGATGTTTCTGGATATATGGGTATAAACCATATTCGAGACCGTGTGATTGAGTGCTACACCTGGTCCTACGCAGTGTACCATGAGGAAGAAATGTCGTTTGCACGGATGCTCTTTGCTAAGATAGTTGTGATAATTGCCCTATTAGATGACACATACGATGTCCATGGATATACCTCCATCCAGGAATGCCGGATGCTAAACGCAGCCATTCAAGGATGGGATGACAGTGCTGTCTTGCTTGTACCCGAGTACCTGAGAAAGTTTTATGAATTTATCTTGCGCTGCTTTAGGGAGTTTGAGGATCAAGTGCCAAGCAATCAGAAGTACCTGATTGCCTTCAGCAAGACAGAGTTACAAAGGTTGTCAAGTTATTATCTGGAAGGAGCCGAATGGTCCCACCGGAAGCACATGCCCAGCTTCAGCGAGCAGGTGGCTCTGGCGACAATGACCACAGGAACACGGCCGCTGGCTGCTGGTTTAATGGTTGGCATGAGTGAGTCCATGACAACGAAACAAGCGTACGAGTGGGCTGTGAATAGCACTGACGCCATCATCTCATGCGGGAAAACTGGCCGTTTCATGAACGACATTGCCGGATTTAAGCTCGGGTCGCAGAACAAAGCTGACATGCCATGTTCGGTTGAGAGTTACATCAACGAGCACAAGGTCACAGCCGATGTCGCCATCGCCAAGATTAATGAATTGGTAGAAGATGAGTGGAAAACAACTAACCAGGCTCGCATTGACCACCGTGATGTGCTCCCTGTGGTGCAGCGCCTTATCAATATAACCATGGCCATTCCATTGTATTACAGCGATGGAATTGATGGATTCACGTTCGGCGAGGGCATTCAGGAGGTTCTTGAGAAACTCTACGTCAAGCCCATTCCCTTATAG</cdnaseq>

Protein Sequence

<aaseq>MHVSKQISEEWMRERANKLKEDVCGLFIMASNGILERMNLVDTIQHLGIDHLFQEEIDSALKDIHENDLASSKLHEVALRFRLLREHGFWVSPDVFNKFKGDHGTFNNELSLADDPRGLLSLYNAAHLFIHGEPELVEAISFARHHLESFNRRNVLKAPLADQVKRALHLPLPRTHRRVEMVSYMFEYGREDGHNPVILELAKLDFNLLQRVHLKELKEISRWWKDVSGYMGINHIRDRVIECYTWSYAVYHEEEMSFARMLFAKIVVIIALLDDTYDVHGYTSIQECRMLNAAIQGWDDSAVLLVPEYLRKFYEFILRCFREFEDQVPSNQKYLIAFSKTELQRLSSYYLEGAEWSHRKHMPSFSEQVALATMTTGTRPLAAGLMVGMSESMTTKQAYEWAVNSTDAIISCGKTGRFMNDIAGFKLGSQNKADMPCSVESYINEHKVTADVAIAKINELVEDEWKTTNQARIDHRDVLPVVQRLINITMAIPLYYSDGIDGFTFGEGIQEVLEKLYVKPIPL</aaseq>

Gene Sequence

<dnaseqindica>1..280#571..955#1485..1709#1817..1952#2131..2382#4356..4649#ATGCATGTAAGCAAGCAGATATCAGAGGAATGGATGAGAGAGAGAGCCAACAAATTGAAAGAAGATGTCTGCGGACTGTTTATTATGGCCTCAAATGGCATCTTGGAGAGGATGAACTTAGTGGATACAATTCAACATCTAGGAATAGATCACCTCTTTCAAGAGGAGATTGACTCTGCACTAAAAGACATCCATGAAAATGATTTAGCTAGCTCTAAGCTGCATGAGGTTGCTCTTCGGTTTCGCTTGCTTAGAGAGCATGGATTTTGGGTGTCTCCAGGTATTTTTGTACCTATTTAATAAATTGTTAAGTTTCTTAGTATAATTGATCAACACGGTGAGGCCATAAAAGGGCTTAAAAACATGCACAGTTATATAACCTTGGCATGCTATAAAAATATGTAGTGTAAACTGTGTATATAGTGAAAACCTAGAAACAATCATGGAATAAAAAAATGAACGTGTAAGATTTTTCCATGTCATTATGAGTAAAACTTTTATTCTACTATATATTTTCCCAACATGTCACAATAATCGCATATATTAATTGTTCTCAAATCTAATGTGCAGATGTATTTAACAAATTCAAAGGTGATCATGGCACTTTCAATAACGAATTATCATTAGCCGATGACCCAAGAGGCCTACTATCTTTATATAATGCAGCCCATCTGTTCATACATGGTGAACCAGAACTCGTGGAAGCCATTTCTTTTGCAAGGCACCATCTCGAATCATTCAATCGGCGTAATGTTCTGAAGGCCCCTTTAGCTGATCAAGTCAAGCGTGCCCTTCACTTGCCATTGCCAAGGACACACAGGAGAGTGGAGATGGTATCATACATGTTTGAGTATGGCCGAGAGGATGGGCACAATCCCGTTATTCTTGAACTAGCAAAGCTGGATTTCAACCTACTGCAGCGTGTTCACTTGAAAGAACTCAAGGAAATATCTAGGTACTAATATCAATTTGTTACGAGTATATCAACGGCTGGGTAATGAGAATTCATGTGGCCACAAAAAAAAGAGAGCAAAATATACCCTAAATTCAATATAAAATGATATTCTATCTCTTGCATTATATTATAATATGTTTTAAATGCATTATCTTATTAACTTTTGGAGACGGCGTTTAATTAATATCATTTGTCTTATTGAAAAATTATGTAAGTATGATTTATTTTGTTGCGAATTCTTTTATCAAGTACATGGAGCATGTCATATAATTTTCATAATTACACTAAATTTTCGAATAAGGAGAAATGTCAAATATTATATGTCCAAAATTTAATATTGTCATGCTATTAAAAACAGACGAAGTATATCTAAGAATGTGGAACTGATCAATGTACCATCATAAATACGCATAGACTGTTTCAATTATGATCGTTGGTTTCACACATAATTTCCTAAATATATACCTGACGTTGCGCTATGTTGACGGTCTCAATGTATGTACAAAATTGATATGATATTTTCTTTCAGGTGGTGGAAAGATGTTTCTGGATATATGGGTATAAACCATATTCGAGACCGTGTGATTGAGTGCTACACCTGGTCCTACGCAGTGTACCATGAGGAAGAAATGTCGTTTGCACGGATGCTCTTTGCTAAGATAGTTGTGATAATTGCCCTATTAGATGACACATACGATGTCCATGGATATACCTCCATCCAGGAATGCCGGATGCTAAACGCAGCCATTCAAGGGTACATTGGATATGTTTATATATGCATCAAATTATGTCTTAATTATTATTAGCACGCTGACAATTAGTGGTTAGATGAATGCTGACTTTGATTTTAATATCGTGCAGATGGGATGACAGTGCTGTCTTGCTTGTACCCGAGTACCTGAGAAAGTTTTATGAATTTATCTTGCGCTGCTTTAGGGAGTTTGAGGATCAAGTGCCAAGCAATCAGAAGTACCTGATTGCCTTCAGCAAGACAGAGGTACATCTAGCTCTATTAATTATATATGTTCCAGAATCCAAAAACATGCATGCCTACATAGATAATTAATAATATAATTTTTACACAATTAATTCGTTTTGTCCTTAAATTTCGTCCCACAATTAATTTTTTTATGACCTCCTTTGCCCCAATTATATATATATATATATTCATACAGTTACAAAGGTTGTCAAGTTATTATCTGGAAGGAGCCGAATGGTCCCACCGGAAGCACATGCCCAGCTTCAGCGAGCAGGTGGCTCTGGCGACAATGACCACAGGAACACGGCCGCTGGCTGCTGGTTTAATGGTTGGCATGAGTGAGTCCATGACAACGAAACAAGCGTACGAGTGGGCTGTGAATAGCACTGACGCCATCATCTCATGCGGGAAAACTGGCCGTTTCATGAACGACATTGCCGGATTTAAGGTATATATATACCGATTAACTAATTAATTAATTAATTTGACATGTATAAATTCATTTGCAGCACGTACATATATCGATCAATGATTATTTTTTCTGTTGGGGCAATATTACTATTAATAACCCATGTTTTGTATTAATTCTTATTGTGAAACAAAGAATTATAATATTTTAACCCTAATTTTAGAAAATGTACTTTGTTTCTTACTGATCTAGAAAAAACTATGAACTATTTATATAAACATAAACATATATCTACATTAATTTAAAATAAAAAATAAGTCAAACAAGAAGTTACAATTAATTTGTACTGAAATTAAAGTTTTTTGTTTTATGCAAGGTTTCGGTTTCAGGCATGCATATTAGCCGTCATATGTAAATTTCGGTGACCAATATATAACAAAAACCAGACAACTAACAGATAGGAAAAATAGTTTTAACGAAGGATAATGTCTGGATTATCCCATGAATTATCGTGGTCGTTTGAATTGCCCTTAAATTCAAGTGCTAGACATTTTGCACTCCCAACTATTCTAACCTGTTAAATAATGCCATTGACTCAACCCAGAGTGGTTTTCGTTCCTACGTGACACATACGCGCGCATGCAGCCTAGTTAGCAAAGTTTTCTTTTAAAAAAAAATGTTGGGCCCTCCTATCAGATTTTCTCCTCCCATTATCTCTTTCCCCTCTTCCCATGATCGTGAGTGGCATCGACACCCACCCCCCATCTTCCTCTATTGCACGGTCGAGACCTCCGCAGGTGATGATGACGCTGGTCTAGAGAGGCACAGTGGTGACCTCACCAGGCGATGGTGATGCCATTGGCGGCTACCCTTGGTCTAGGTCGGGCAGTGGAGCTTCGTGAGTAGGAGAGCCTCGAGTTCGCATACATCTGCCATCGCCCTGAAGTCCATGCTAGTCAGCTTCAAGTCTGAGCTCTGAGTTTCGCTGTCGGACCCACCGCCACCGCCACCACCACCTCCCTAAAGTTTGTTGTTCTAGCCGATGCCCTCCACAGGCGAGCTCGGCTCCATCGCCAGCTGCCTTAACTTCTAGCATCTCTCCCTCACTGGCCGCTGCCTCCAGCCTCCCCAAGGTGAGCTCGAACTCTGCTGCAGCACCATACCCAAGCGACCTCCCTCTTCGTTGTTGGTCGTGGCTACCCTCTTCTTCGCCACCGGCAGCCACCTCAAACATCCCTGAGAAGAGATCAATCACCGTTTAGGCGCACTCCCCAAGCGAGGTTCCATTGCGCTGTTGTTCCGCTGAGAACGACCTCCAACACTCTCACCGAGCGAGCTCGATGCCAATGACTCCCTCCAGCGCTCCTGAGCAAGAGAGATAGGGAGGTAGAGAAGGATGAGATTGTTGATACGTGGGGCCCATAATTATTTTAAATTTTTTGTGCTGACTGGATAGCCACATGTGCTTGTTTCTCTTTGAATCCGTCCAAAATAGTGCAGCGGTTAGTTCATCCGATTTAAATAGTGGAGGGTGTAAAATGTATGGTATTTGTATTCAAGAAATAGTTAGGACAACCGCGATAGTTCATATGGTACTTTGGATGTTTTTATAATAACTAATACTCCTACTCCTTTCATTCCAAAATAAATATACTTATGCGTGTTTCTCAAAATGTATAAAATTCCTATATATATTCTGTAAGGGAGGTAGTACCTAATCTTATACTCCCTCCATCCTAAAATGTTTGACGCCGATGACTTTTTTAAATATGCTTGATCCTTCGTCTTATTCAAAAAGTTTAGGTAATTATTAATTCTTTTCCTATCTTTTGATTCATTGTTAAATATACTTTAATGTATATATAGAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACAGTCAAATATGTTTAAAAAAGTCACCGGCGTCAAACGTTTAGGGAAGGAGGGAGTATGTAGTATAAAGTATATTGACATTGAGTATGTGTGCTACATGGAATGCAGCTCGGGTCGCAGAACAAAGCTGACATGCCATGTTCGGTTGAGAGTTACATCAACGAGCACAAGGTCACAGCCGATGTCGCCATCGCCAAGATTAATGAATTGGTAGAAGATGAGTGGAAAACAACTAACCAGGCTCGCATTGACCACCGTGATGTGCTCCCTGTGGTGCAGCGCCTTATCAATATAACCATGGCCATTCCATTGTATTACAGCGATGGAATTGATGGATTCACGTTCGGCGAGGGCATTCAGGAGGTTCTTGAGAAACTCTACGTCAAGCCCATTCCCTTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015329