BGIOSGA015415

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Revision as of 04:13, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015415| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015415, complete gene.| tag = OS04G02...")
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Gene Name

BGIOSGA015415

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015415, complete gene.

LocusTag

OS04G0287175

Ensembl Transcript ID

BGIOSGA015415-TA

Ensembl Protein ID

BGIOSGA015415-PA

Length

4959

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:10308501..10313459

Sequence Coding Region

10313194..10313459,10312028..10313110,10308501..10309308

Genome Context

<gbrowseImage1> name=IndicaChromosome04:10308501..10313459 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:10308501..10313459 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGTCCTCCTAAACCCTTCGTCTTCCTCAAGCAGCAAAGCAACGCCGCGGCCGCCGCAGCAGCAGCAGCTACTACTACTCTTGCTCCACTTGCTGCTCGTTGCCGTCCCCGCCACCTCTCTCACCTTCAGCTATGACGCGGACTCCTTCGTCTCCGAAGATTTCAGGCAGGAGGACGACGCCATGGTCACCGCCGGCCGGATCGAGCTGCTCGGCGAGGAGTTCGCGGCGCGGGCCAGGGACGCGCGCTGTACAAGCGGCCGGGGCAACGCCCTCGCCGGCCACGGCATGACGTTCTTCCTCGCGCCGTTCATGCCCGACATGCCGCAGGAGTGCTACGAGGGATGCCTCGGCCTCTTCGACCAGAGCTTGACGAGGAACACGGAGAGCGCCACCATGGGCAACGCCTCAGGCGCCGCCAGCTTCGTCGCCGTCGAGTTCGACACGCACATGGACGGGTGGGACCCGAGCGGCCGGCACGTCGGCGTCGACGTCAACAACGTCGACTCGCGCCGCGGGAACTACGTGGTCTTGCCGGAGGACAGCCTCGTCGACGCCGGCGTGATGTCCGCCACGGTGTCCTACGACAGCGGCGCGAGGCGGCTCGACGTCGCCCTCGCCGTCGGCGGCGGCGCCGCAACCGCAACGTACAACCTCTCCGCGGCCGTCGACCTGCGAAGCGTGCTGCCGGAGCAGGTCGCCGTAGGCTTCTCGGCGGCCACCGGCGACCAGTTCGCCAGCAACCACACCGTGCTCTCCTTCACCTTCAGCTCGACGCTGCCGACGAGGACAACGAACCCGCCGCCGCCATCCACCTCGTCAGCCAAGACGGCTCATCTCAGCGCCGCCGTGGCCGCAGCCGGCATAGCACTGTTACTCCTCGTCCTCGCCATCACCATCCTCATTCGCCGAGCGAGGAAACGCCGCCGACGCGACGACGGCGACTCCTACGACGACTCCCTCGACGACGACGAGGAGGAGGACATGGAGTCGGGCACGGGGCCACGGCGAATCCCGTACGCGCAGCTGGCGGCGGCGACGGGCGGGTTCGCGGAGATCGGCAAGCTCGGGGAGGGCGGGTCGGGGTCGGTGTACGGCGGGCACGTGAGGGAGCTCGGGCGGGACGTGGCGATCAAGGTGTTCACCCGGGGGGCGTCCATGGAAGGGAGGAAGGAGTACAGGTCGGAGGTGACGGTGATCAGCCGGCTGCGGCACCGGAACCTGGTGCAGCTGATGGGGTGGTGCCATGGCCGGCGGCGGCTGCTGCTGGTGTACGAGTTGGTGCGCAACGGCAGCCTCGACGGCCACCTCTACAGCAACAAGGAGACCTTGACCTGGCCGCTCAGGTACCAGATTATCAATGGACTAGCCTCCGCGGTGCTGTACCTCCACCAGGAATGGGACCAGTGCGTCGTCCATGGCGACATCAAGCCCAGCAACATCATGCTCGACGAATCCTTCAACGCCAAGCTCGGCGACTTCGGCCTCGCGCGCCTCATCGACCACGGCATGAGCCTCCAGACCATGACCGCCGTCGCCGGCACGCCGGGCTACCTCGACCCGGAGTGCGTCATCACCGGCAAGGCCTCCACCGAGTCCGACATGTACAGCTTCGGCATCGTCCTGCTCGAGGTGGCAAGCGGGAGGCGACCAATGGTAGTGACACCTCGTGCAGCCGCTGCCACCGCGGGTGGTGGGAAGGACGACGACGACGGCGGTGGACAGGTGTTCCGCCTGGTGGAGTGGGCGTGGGAGCTCTACGGCCGGGGTGATGATGATCAGTCGTCGCTCGACGCCATCGCCGACACACGGCTCGGCGGCGCATTCGACCGGTGGGAGATGGAGCGTGTGGTGGGCGTCGGGCTGTGGTGCGCGCACCCCGACCCGAAGGCGCGGCCGGCGATCAGGCAGGCGGCTGAGGCGCTGCAGTCGAGGAAGTTCAGGATGCCGGTGCTGCCGCCGAGGATGCCGGTGGCCGTGTACCTGCAGCCGTTCGCGGCTTCCACCATGAAGTACTACGGCGACAGCACGACCTCCGTTGGGTCGGAGGTTGTTGGTTACTCGTCGACCAGCCTTGCGACGGCGACGCTGTCGTCAAGCTCTAGCTTGCCACCTGCCATGGCTGACAGTGACAGCTTGAGCCCAAGAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MAVLLNPSSSSSSKATPRPPQQQQLLLLLLHLLLVAVPATSLTFSYDADSFVSEDFRQEDDAMVTAGRIELLGEEFAARARDARCTSGRGNALAGHGMTFFLAPFMPDMPQECYEGCLGLFDQSLTRNTESATMGNASGAASFVAVEFDTHMDGWDPSGRHVGVDVNNVDSRRGNYVVLPEDSLVDAGVMSATVSYDSGARRLDVALAVGGGAATATYNLSAAVDLRSVLPEQVAVGFSAATGDQFASNHTVLSFTFSSTLPTRTTNPPPPSTSSAKTAHLSAAVAAAGIALLLLVLAITILIRRARKRRRRDDGDSYDDSLDDDEEEDMESGTGPRRIPYAQLAAATGGFAEIGKLGEGGSGSVYGGHVRELGRDVAIKVFTRGASMEGRKEYRSEVTVISRLRHRNLVQLMGWCHGRRRLLLVYELVRNGSLDGHLYSNKETLTWPLRYQIINGLASAVLYLHQEWDQCVVHGDIKPSNIMLDESFNAKLGDFGLARLIDHGMSLQTMTAVAGTPGYLDPECVITGKASTESDMYSFGIVLLEVASGRRPMVVTPRAAAATAGGGKDDDDGGGQVFRLVEWAWELYGRGDDDQSSLDAIADTRLGGAFDRWEMERVVGVGLWCAHPDPKARPAIRQAAEALQSRKFRMPVLPPRMPVAVYLQPFAASTMKYYGDSTTSVGSEVVGYSSTSLATATLSSSSSLPPAMADSDSLSPRE</aaseq>

Gene Sequence

<dnaseqindica>1..266#350..1432#4152..4959#ATGGCTGTCCTCCTAAACCCTTCGTCTTCCTCAAGCAGCAAAGCAACGCCGCGGCCGCCGCAGCAGCAGCAGCTACTACTACTCTTGCTCCACTTGCTGCTCGTTGCCGTCCCCGCCACCTCTCTCACCTTCAGCTATGACGCGGACTCCTTCGTCTCCGAAGATTTCAGGCAGGAGGACGACGCCATGGTCACCGCCGGCCGGATCGAGCTGCTCGGCGAGGAGTTCGCGGCGCGGGCCAGGGACGCGCGCTGTACAAGCGGCCGGTGCAGCTCTGGGACGGCGCCACCGGCGAGGAGGCCAGCTTCGCCGCGAGCTTCAACTTCACCATCCGGTCGGTGGCTGGCAGGGGCAACGCCCTCGCCGGCCACGGCATGACGTTCTTCCTCGCGCCGTTCATGCCCGACATGCCGCAGGAGTGCTACGAGGGATGCCTCGGCCTCTTCGACCAGAGCTTGACGAGGAACACGGAGAGCGCCACCATGGGCAACGCCTCAGGCGCCGCCAGCTTCGTCGCCGTCGAGTTCGACACGCACATGGACGGGTGGGACCCGAGCGGCCGGCACGTCGGCGTCGACGTCAACAACGTCGACTCGCGCCGCGGGAACTACGTGGTCTTGCCGGAGGACAGCCTCGTCGACGCCGGCGTGATGTCCGCCACGGTGTCCTACGACAGCGGCGCGAGGCGGCTCGACGTCGCCCTCGCCGTCGGCGGCGGCGCCGCAACCGCAACGTACAACCTCTCCGCGGCCGTCGACCTGCGAAGCGTGCTGCCGGAGCAGGTCGCCGTAGGCTTCTCGGCGGCCACCGGCGACCAGTTCGCCAGCAACCACACCGTGCTCTCCTTCACCTTCAGCTCGACGCTGCCGACGAGGACAACGAACCCGCCGCCGCCATCCACCTCGTCAGCCAAGACGGCTCATCTCAGCGCCGCCGTGGCCGCAGCCGGCATAGCACTGTTACTCCTCGTCCTCGCCATCACCATCCTCATTCGCCGAGCGAGGAAACGCCGCCGACGCGACGACGGCGACTCCTACGACGACTCCCTCGACGACGACGAGGAGGAGGACATGGAGTCGGGCACGGGGCCACGGCGAATCCCGTACGCGCAGCTGGCGGCGGCGACGGGCGGGTTCGCGGAGATCGGCAAGCTCGGGGAGGGCGGGTCGGGGTCGGTGTACGGCGGGCACGTGAGGGAGCTCGGGCGGGACGTGGCGATCAAGGTGTTCACCCGGGGGGCGTCCATGGAAGGGAGGAAGGAGTACAGGTCGGAGGTGACGGTGATCAGCCGGCTGCGGCACCGGAACCTGGTGCAGCTGATGGGGTGGTGCCATGGCCGGCGGCGGCTGCTGCTGGTGTACGAGTTGGTGCGCAACGGCAGCCTCGACGGCCACCTCTACAGCAACAAGGAGACCTTGACCTGGCCGCTCAGGTACGTACGTATGTGCCCATGTTACCCTCGATCAGTCGTGTTCCTACCTTGACGAAGTGGCTTTTGTGGGGCCCACATCTTGGCCGCATTTACGATAGCGCTGCCTGTAGATTCCATCGACAGGGCAATTTGGCTGGACTGATGAAAATACATTAACCATGGATGGTGACGTGTCCCCGAGTCCCGTCCTCCGGGTGCATGAATTATGATTAGAGGATTGCTCCAGTCCGGCAGATTGTATCGGGAGGTATAAAATCAAATCTAGCCGTCTAAATTAGGAACCGGAAAAGAGAATAGGGGAGGGTATTGAACATTTGAAATCACTCAAATTATAGTAATCAGTAAATGACAGAGGAGAGCTGCTGGATGGGAGTAAATCTCTTATGATTAACAAGGAAGGGAGCCCGCCCATTTACGTGGGCATATATCGTAGATTGTATTTCAAAACACTATAAGGATGGAATATAAATCAGAAAATATTTTTAAAATATAAACTGAGAATAAAGCCCGCAGAGATACACTAACATCTTATTTGTTGTTCAAGAAAAAGAATGATAAAATAAATCTTACATCACTATATATATACTGTAAGGGAATGTAAATTTTCTTACAATAAAAAAGAAATATATTTACCGTAAAATAGATGGTATATTTTAATATACTACTAAATATGATAAGAATAAGAATATATCTCATATTTAAATAAAAATCATTTTGTCGTGGTCATATATAAACTCCTCTATTGTTATTGTTTTAAAAGCTATGTTCATTTTTAATAAATGAAACTGCATTAGTACCACTAAAATAAATTATATATTATTAATACACTAAAAAATAATCTACACTGCTTAACTCGATGTTCATCACTTATTTCCACATCTATATGTATAAATAGTCTAAACATACCACTTCTACCGGATAATACAATAAAACCGTTAAAAATAGATATAAATGTCTCTCTAACAGATGAAATCGACTGTAACTACCAAAGCCTTCTTATATAATGCCCCGAAACATGGGTCCCACATCAACGTAGCCGTGACCCTAAAGACCAGCCTATGGCACCATTTTAACACTTAGTTCACTATGAGCACACCCACAAAGGATTGCATTAGTAAGAATGACGCCACCTTAACTCAACCATATGTATATGCCTGCAATATTTACGATGGCATAGTAAACATTATACGCTGCATTGAAGGACATGGAGGGACAAAAAGGAGGAGGTGATAAAAATAGTTATAATTTTTGCCCCCTACTTATTTCTGTATAGTATTATTTTTAACAAAATCATAGTTGAAAGGCTATTGACAACAATAAGTGCCAGTGTTTATGATTTTTGTTAATTAGTATTTCTTTCCGATTTTACTATTAATATATTGATATATTTTTTGATTTATCGTTTTTCTCCGTAGTATATGAGGTAGATAATTAAGTTTTGTCTTTTTCTGGAAAGTGAGAAGATTATAAATATAGGTAGTTTGGTTTTCCATCTAATAAGTGAGAAAGAAAAAAGAAAAAAAAAGGAATGATGTGGGCCCAGCGTACGTATCAAAGTATGGACGTACTTGTTGTTTTTGGGAATACCTATACGTGCACGTACTATGCGAGTTTTTGAGATAAATTTAATTATATTTTTTATAATAGATCTAATGGTTAGAAATAATGGGCCCACCGGATTTTAATATTTTTTAAAGCGCCACATAGCAACTTAGGAGTGTTTTTAGGGGTGCTATATGGCGGCTTAGAAGAGTTTGTAGAAAGTTTAATGAACTTTTAGTCTATAATAGGTAGATGTTGATGATTATTGTCCTACGAGAACCATAAACTACTCCATCTTAGATTATAATTCGTTTTGAATTTGATCAAAATCATTTTACTATAAATTTAATTAAGTTTATAAAAAATATAATAAGACACCAAATTATTTTCAATCTATAATTGAATATATTTTTTTAATATATTTGTCTTATGTTAAAAATGTTACTATTTTTTTATAAATTTGGTTAAAATTAGAGTAGTTTAACTTTGACCAAGTCAAAACTCCTTATAATTTGAACGGAGGGAGTAATTACTACTGCCTCTATGGCTCTATCCCAATTAATCATACCCTAAAATTTGTACGTCTTAGTTTCTAAATCGATCATTATCTAACTGTTATCTATTTGCTTATTCGTGTAGAAGTAAATAACATTGTTGTATATTGTTCATTTAGGTGTGCAGTAGTAAATGGCATCGTTGTATATATGTTCGTTTATCATACATACCTCACATTAATTCAACTACACGTTTTCATATCCACATACATGCCTAGTACAACATCATGACCGATGAGGTTTAATTCTAAAAGGAGTGATATTTTTTGCGTTGATCTCGGTAACATTTACAAATATGATAAGATCAAATTGGAAAGGACGGGGAAAAAGGAGTAGTACTCTGATCGAAAGTTCGATTTTATCTTCGGATAACAGTTAGTTATAAGGTGATGTATTATACAAATTACCACATCACATTTATATTCATACTATCGTAATAGTTAGGTGTTAATTTGGAGTTTTTCTATAAAAAGAATGCTATAAATTCACAATAACTCATATGATCTAAAAAAATCCGAAATTAAGCGCGGTATTGCACGTAAACTCATATGTAAATTCTCTGTGAAAATCAAATATACTTTCCCTGTATCTGTGTATCATATTATGTGACTAATTTTTGTCAGGTACCAGATTATCAATGGACTAGCCTCCGCGGTGCTGTACCTCCACCAGGAATGGGACCAGTGCGTCGTCCATGGCGACATCAAGCCCAGCAACATCATGCTCGACGAATCCTTCAACGCCAAGCTCGGCGACTTCGGCCTCGCGCGCCTCATCGACCACGGCATGAGCCTCCAGACCATGACCGCCGTCGCCGGCACGCCGGGCTACCTCGACCCGGAGTGCGTCATCACCGGCAAGGCCTCCACCGAGTCCGACATGTACAGCTTCGGCATCGTCCTGCTCGAGGTGGCAAGCGGGAGGCGACCAATGGTAGTGACACCTCGTGCAGCCGCTGCCACCGCGGGTGGTGGGAAGGACGACGACGACGGCGGTGGACAGGTGTTCCGCCTGGTGGAGTGGGCGTGGGAGCTCTACGGCCGGGGTGATGATGATCAGTCGTCGCTCGACGCCATCGCCGACACACGGCTCGGCGGCGCATTCGACCGGTGGGAGATGGAGCGTGTGGTGGGCGTCGGGCTGTGGTGCGCGCACCCCGACCCGAAGGCGCGGCCGGCGATCAGGCAGGCGGCTGAGGCGCTGCAGTCGAGGAAGTTCAGGATGCCGGTGCTGCCGCCGAGGATGCCGGTGGCCGTGTACCTGCAGCCGTTCGCGGCTTCCACCATGAAGTACTACGGCGACAGCACGACCTCCGTTGGGTCGGAGGTTGTTGGTTACTCGTCGACCAGCCTTGCGACGGCGACGCTGTCGTCAAGCTCTAGCTTGCCACCTGCCATGGCTGACAGTGACAGCTTGAGCCCAAGAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015415