BGIOSGA015447

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Revision as of 04:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015447| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015447, complete gene.| tag = OsI_151...")
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Gene Name

BGIOSGA015447

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015447, complete gene.

LocusTag

OsI_15162

Ensembl Transcript ID

BGIOSGA015447-TA

Ensembl Protein ID

BGIOSGA015447-PA

Length

5726

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:9237227..9242952

Sequence Coding Region

9242776..9242952,9242604..9242658),complement(9241957..9242153,9241619..9241740),complement(9241389..9241536
,9241072..9241141),complement(9240841..9240986,9239953..9240097),complement(9239382..9239500
,9239195..9239266),complement(9238611..9238714,9238394..9238450),complement(9238118..9238310
,9237781..9237924),complement(9237227..9237343

Genome Context

<gbrowseImage1> name=IndicaChromosome04:9237227..9242952 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:9237227..9242952 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCCAAAGAAGCATTCCGACGTATCATATTCTGCGTCTTGCTTCTACTCTGTGTGAGCTGCAAATGCTTAACCTCAGAGGTAAACACAACCCAACTGGCAGTCCTCAAGGTTGATGCCTCACCGCAGCATGCTCGAAAGATCCCTGAGACGCTCTTTGGGATATTTTTCGAGGAGATCAACCATGCTGGAGCAGGTGGAATATGGGCAGAGCTTGTCAGCAACAGAGGTTTCGAAGCTGGAGGCCCTAATACTCCATCGAGCATTGACCCTTGGTCCATAATTGGAAATGAATCTGTCATATCAGTGGCAACTGATCGATCATCATGTTTCAGTCGAAATATCATTGCTCTGAGGATGGAGGTTCTCTGTGGTGACTGCCAAGCTGGTGGTGTTGGCATTTACAATCCAGGATTCTGGGGCATGAACATAGAGGATGGAAAGAACTACAGTCTTGTCATGTATGCTAAATCATTAGAAAATACAGAGTTAACAGTTTCACTAACAAGCTCTGATGGGTTGCAAAATCTGTCTTCTGCTACCATACAAGTTGCTGGTACATCAAATTGGACAAAACTTGAGCAGAAGTTGGTTGCTAAAGGAACAAACAGAACCTCAAGGCTTCAAATAACAACTAACAAGAAAGGTGTCATATGGTTGGATCAAATATCACTCATGCCTTCAGACACGTATAAGGGTCATGGTTTCCGGAAAGAACTTGTATCAATGCTTTTGGATTTAAAACCACAATTCATGAGGTTTCCTGGAGGCTGCTTTGTTGAAGGCCAGTGGTTAAGAAATGCATTCAGGTGGCGTGAGTCTGTTGGTCCGTGGGAGGAGAGGCCTGGACACTTTGGTGATGTCTGGGGTTATTGGACTGATGATGGCCTTGGATATTATGAGTTTCTTCAGGATATACTGGACAGCCTAGAATTTGCAAGGGGAAGTACCAACTCAACATGGGGCTCTCTTAGAGTTGCAATGGGGCATCCTGAACCATTTCCAGTCAAATATGTTACAATTGGAAACGAAGACTGTACAAAAAAATTTTACCATGGTAATTACCTCAAGTTCCATCGTGCTATAAGAGAGGCTTATCCAGATATTCAAATCATCTCAAACTGTGATGGTTCATCTAAACCACTTGACCATCCTGCTGACATATATGACTTCCATGTCTACGGGGATTCTAATACTTTGTTTTCTATGAGGAACAAATTTGACAGCACGCCTCGGAATGGGACAAAGGCCTTTGTCAGTGAGTATGCTGTTTCAAGTAATGGTGTAGGTAGAGGAACTCTTCTTGCCTCACTGGCTGAGGCTGCTTTCCTCACTGGACTGGAGAAGAATAGTGATGTTGTTCAGATGGCCAGCTATGCACCGCTCTTCATGAATGATAATGATCGCTCGTGGAACCCAGCTGCTGTCGTCTTCAACTCATGGAAACAGTATGGAAGTCCTAGTTACTGGATGCAGACAATTTTCCGCGAATCGAGTGGTGCTGTGCTGCATCCAGTGACAATCAACTCCATGTATTCTAATTCATTAGCAGCTTCTGCAATAACCTGGAAAGCCAGTAACAGTAGCTTCTTGAGAGTGAAGATTGTAAACATTGGGTCCAACCCTGTGAACCTCATAGTATCCACAACTGGTCTTGAAGCTTTGGTCAATATGCGGAAATCAACAATCACTATTCTCACATCCAAAAATCTGTCAGACGAAAATTCATTCAGTAAACCCACTAATGTCGTGCCGGTTACAAGAGAACTACCCAATGCTGGAGAAGAGATGTTTGCTTTCCTTGGTCCTTACTCATTTACTTCATTTGATCTTGCTCTCGGCCAGCAGAAACATGTTTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MGSKEAFRRIIFCVLLLLCVSCKCLTSEVNTTQLAVLKVDASPQHARKIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGPNTPSSIDPWSIIGNESVISVATDRSSCFSRNIIALRMEVLCGDCQAGGVGIYNPGFWGMNIEDGKNYSLVMYAKSLENTELTVSLTSSDGLQNLSSATIQVAGTSNWTKLEQKLVAKGTNRTSRLQITTNKKGVIWLDQISLMPSDTYKGHGFRKELVSMLLDLKPQFMRFPGGCFVEGQWLRNAFRWRESVGPWEERPGHFGDVWGYWTDDGLGYYEFLQDILDSLEFARGSTNSTWGSLRVAMGHPEPFPVKYVTIGNEDCTKKFYHGNYLKFHRAIREAYPDIQIISNCDGSSKPLDHPADIYDFHVYGDSNTLFSMRNKFDSTPRNGTKAFVSEYAVSSNGVGRGTLLASLAEAAFLTGLEKNSDVVQMASYAPLFMNDNDRSWNPAAVVFNSWKQYGSPSYWMQTIFRESSGAVLHPVTINSMYSNSLAASAITWKASNSSFLRVKIVNIGSNPVNLIVSTTGLEALVNMRKSTITILTSKNLSDENSFSKPTNVVPVTRELPNAGEEMFAFLGPYSFTSFDLALGQQKHVS</aaseq>

Gene Sequence

<dnaseqindica>1..177#295..349#800..996#1213..1334#1417..1564#1812..1881#1967..2112#2856..3000#3453..3571#3687..3758#4239..4342#4503..4559#4643..4835#5029..5172#5610..5726#ATGGGCTCCAAAGAAGCATTCCGACGTATCATATTCTGCGTCTTGCTTCTACTCTGTGTGAGCTGCAAATGCTTAACCTCAGAGGTAAACACAACCCAACTGGCAGTCCTCAAGGTTGATGCCTCACCGCAGCATGCTCGAAAGATCCCTGAGACGCTCTTTGGGATATTTTTCGAGGTACTTTAGTTTCCTTCCCTTGAAAAAATATCCCAGTTCTTAACTTGTTAAGACTTATCAAGTTTTAAATACGAACGTTTACATATTCTTACTGATTACTTTGGTAAAATACTGTAGGAGATCAACCATGCTGGAGCAGGTGGAATATGGGCAGAGCTTGTCAGCAACAGAGGTACTTCTACTGGCCTGCCATTAATCTCATCTCTAGATTGTGCTGTGTGCCTCTTGAAATAATTTTTGTCAAGTTATTAGATAGTAGAGAGAGTTTACTACGTGGTGTTTGGTATTTTGGTTGGGTGAACTTGCTATGGAATGCAACTACATCTATAACAATTACTGACATTTCAATGGCTCTCTTACAAAAATAGATGAGTATTGAGATCAATGCCTATCTGGTCCAACCGAGGATAAAAGAGTTTATCGTAATGGCTTATAAATAGAAGTGCATGCTATGAAGTATAGAAAATAATTTCTGCCCAGCACTGGCCCATACTATAACAGAATTGTTTTCTGTTTAACAATTTTTTGACATCGAAACTTGAGCATAAACTGGAAACAGCATTCAAACAGGCATTTTCCTTCTGAAGTTTAGTTCAACCAGCTCATGAATTTTATGATACAGGTTTCGAAGCTGGAGGCCCTAATACTCCATCGAGCATTGACCCTTGGTCCATAATTGGAAATGAATCTGTCATATCAGTGGCAACTGATCGATCATCATGTTTCAGTCGAAATATCATTGCTCTGAGGATGGAGGTTCTCTGTGGTGACTGCCAAGCTGGTGGTGTTGGCATTTACAATCCAGGATTCTGGGGCATGGTATGACCTTATGTTGATCAGAGGTTGAATTTTCATCTCATAGCTGTCGTTTTGCGAAATGTTTTCATTAAATTTAACCAGAAAATACACAGTTTCTGTTTGGAACTTTTCGTTAATGTTTGCTTTCATGCTCTCAAGTAAGGCAAATGTTTAGTACACATTGTGTAATCCTGCCAATTCAGCTGGATAATGTGACCTTGTCATGTCAACTTACAGAACATAGAGGATGGAAAGAACTACAGTCTTGTCATGTATGCTAAATCATTAGAAAATACAGAGTTAACAGTTTCACTAACAAGCTCTGATGGGTTGCAAAATCTGTCTTCTGCTACCATACAGTAAGCATTCTTTGTTTACTAAAACGGGGTAAACTTTTCATTTTTACAATTTTCATCAGTGTATAGTATTTTGTTGCCATAGAGTTGCTGGTACATCAAATTGGACAAAACTTGAGCAGAAGTTGGTTGCTAAAGGAACAAACAGAACCTCAAGGCTTCAAATAACAACTAACAAGAAAGGTGTCATATGGTTGGATCAAATATCACTCATGCCTTCAGACACGTATAAGGTACCATTGTAGTTTGTTCTCGATCTTGATACTTCGAACAGCAAACAGAAGAGTGAACCCAAGTATATTTCACAGGTCAATTGTAGTTGGATTCTTCTTTTATCCAAGATCATATAAAAGCTTTCATTTCTGTCTGTATTTATTTGTTTGTTAATCCATTGAGTTTGATCTCTTTCTAGTAGTCATGCTTATGACGTATGCCATGAGGTTATTTCCATATTTAACTTCCATTTCTTTGTATGTACAGGGTCATGGTTTCCGGAAAGAACTTGTATCAATGCTTTTGGATTTAAAACCACAATTCATGAGGTTTCCTGGTATGTGAATTATTCTTTCCATCGTTGCACATATTTGATCAGACATATTTTGGACAGTTAACTAGATTGAAGGGAACTATTCCAGGAGGCTGCTTTGTTGAAGGCCAGTGGTTAAGAAATGCATTCAGGTGGCGTGAGTCTGTTGGTCCGTGGGAGGAGAGGCCTGGACACTTTGGTGATGTCTGGGGTTATTGGACTGATGATGGCCTTGGATATTATGAGTTTCTTCAGGTACCAATTGGCATTATTTCAGCTCTACATTTTCTTGATTATTCCATAATCATATTTTCCTTTGAATTGAACATCTAAGCTTTCTGAGGATCTGGGTGCTGCCCCAATCTGGGTGTTCAACAATGGTAATTATTTTTGTGTTTATTGCATCTTTGATCACCACTACCGTCTGCCTTTATTGAAATAATTTTGCCTCTTAAATGTCAGGTTTCAGCCACAATGAGGAGATTAATACCACGGCTATTGCTCCATTTGTAAAGGCATGTTTTGAGCTCCCAATTCATTTTTATACCAGCATAGACATATCTTGATGCAGTGAATGAATTCCATTTGTAAATACATTGGAAGTAGCAATTCTCACTTTTCCTGTACATATATCAAGGATTAGAAATAGAAATTTTGTTGCTCAATCCTTTCTGAGACAGCTATTATATATATGATGGGTCTGCTCAAATGATGGTAGATGTTTATCCATCATAATCAATATTGGGACATTATTAAGATGGTTCTTTGGTTTATTTACATGTACTGCACAAATTGATACAACACCTTGGGTTAAGTTCAGATTGTTTTTTACCCAAAATTATTAATGGATTACTTACAATTTTTTTTCTAAATTTGTTCATTTTTATGGATAAAAGTTAGTAACAACTAATTATCTCACCACACGTTGCCCATATTTTCCCCAGACTTGGATAAGTTATAACTGAGGCTCATATCTTTTGTTATTGTCTTTTCTCCAGGATATACTGGACAGCCTAGAATTTGCAAGGGGAAGTACCAACTCAACATGGGGCTCTCTTAGAGTTGCAATGGGGCATCCTGAACCATTTCCAGTCAAATATGTTACAATTGGAAACGAAGACTGTACAAAAAAATTTTACCATGGTAAATATATCAGTTAGTTTCTTATGGATTAAATCTATTTCCCACTACAAGTTGATTATGTTTATGTATACAAGGATTAAGCTCATTCTTTGTCAAGAAAAAGGAAACATAAATAATTTTGGTATAAGCAGATAAGTTACTCAACCTTTTCCTGTAGTTTTTAAACACAAAATATAAACACCTATTTTTATGATTGGGCATATTTTGCAAAAAAAAACATCATTACAAGAATTTTTTTTTGTAGAATTAATTCAATAATTTTCTCACATGGATCTTCATAAAAAAATACAATGCAATTTATTCTTACTCTATTTTTATCTGCATTCTGCCCTTGTTCTCCTAATTTAAACAAGTTTGTTTTGTTGATTTTGAGTAGCTCTATGTCATCATAATTCTGTGGCACTGCACAAAGTCCACTTAAACTGTAGGTATTCTTCAATTCTCTTGAACAGGTAATTACCTCAAGTTCCATCGTGCTATAAGAGAGGCTTATCCAGATATTCAAATCATCTCAAACTGTGATGGTTCATCTAAACCACTTGACCATCCTGCTGACATATATGACTTCCATGTAAACCACAACATTCTTGTAATTCCTGTTGTTAATGTTCAAAATCTGTTCTCTTATTTATTGCTGTTAATATTCTTGGATTTTCTGAAAATATGATAATATATGTTCTTTTCAGGTCTACGGGGATTCTAATACTTTGTTTTCTATGAGGAACAAATTTGACAGCACGCCTCGGAATGGGACAAAGGTATGCGTCCGTTTTCATATCTTTATGGATCTTTATTAGATGGATTGATTTAGTTCGTTTTTGTTTTCTTTTTCTTTATCTATTACTCTGAAAACAAAGGAAAGTCAGGAATATGAGAAGCCTAAGTAATTTGTACCATAATGTACTGTGCTATTTTCATGTGTACAAGCTATTACGGTATAGTCTGTACTCCCTCAGCAATAAGTTTTTTTGTTCAATTAAATCTTGTCATTATATCCAAACAGTTTAGAATGCAAAAAAAAAAAAGCAAAAATATTACAAGTAAAAAAAAAAAAACAGGTTTTGAGAAGCTTGTAACCTGCATTGGTTATCTTTATTGCTTACATCAACCTAGATGCCTTTGCAGTACTATGATTTCAGTGCAGGTTTATTTACAATAGTTCTCTTGCTCATTTACATCATTATAGATGCCTTGACACTTTGACAGTAAATATATTTCTGAATATGGTCTGAGTGCAGGCCTTTGTCAGTGAGTATGCTGTTTCAAGTAATGGTGTAGGTAGAGGAACTCTTCTTGCCTCACTGGCTGAGGCTGCTTTCCTCACTGGACTGGAGAAGAATAGGTGATCGATCTATTCCCCACATGCACACACAAATTTCTTCACCACATGGTTATATTCTCTATTGTCAGTGGCATATAAGGAATTTATCCTATAAATTATATTACTATCGCAAAGATCACTCTGTTGACTATTGAGATGGCTATTTACTTGTTCTTTGCAGTGATGTTGTTCAGATGGCCAGCTATGCACCGCTCTTCATGAATGATAATGATCGCTCGTCAGTATCGATGGCCTTATGATTTCTACATTTCTTGTGTTGTTAACCTTCCACTATAACTGTATCTGAATTAATCCAATCAGGTGGAACCCAGCTGCTGTCGTCTTCAACTCATGGAAACAGTATGGAAGTCCTAGTTACTGGATGCAGACAATTTTCCGCGAATCGAGTGGTGCTGTGCTGCATCCAGTGACAATCAACTCCATGTATTCTAATTCATTAGCAGCTTCTGCAATAACCTGGAAAGCCAGTAACAGTAGCTTCTTGAGAGTGAAGGTAAAACCAATAGTTTCCAATTTCTTCATGGCCTGAGTAGTTTGATTCTATAATTACTGAAATGGCCCAGTTTACATATGGACCACAATCTTGAACATTGGCATATTTCAATAAAATCTCACGCAGATATGGTTTCTACTGTCGGAAGAATGTGTTTAAAACCTCATACTGATTTACAGATATTCTTGTGCAGATTGTAAACATTGGGTCCAACCCTGTGAACCTCATAGTATCCACAACTGGTCTTGAAGCTTTGGTCAATATGCGGAAATCAACAATCACTATTCTCACATCCAAAAATCTGTCAGACGAAAATTCATTCAGTAAACCCACTAATGTAAGGGCAGTTACTTACTTCAGTTATTAAAAACTTCTGCTTCATACATTATAAACTGGATATAGTAAAGGGCATTTCTTATATTCGATTGTATTCCTTGAGGACCTGCTTGGCAGACCTGAAATTCCAGTCAATCCATGTGGATGTGCTGGGATTTCACTCTTCCCATGTTAAGCCCTAAAAGATCTCCACTACAAAACTGGATTATTCATGTTGAAGTTTCTTCATAGGCTTCTAATAACCAAGTAGCTCAAACTATTTACTCTTTTGACCAATAATATATCATCTTTACTGATTTTTGGAACAGATTATTTGTCCTGTAAGAGAATCAAATTTAGTTATGAAGTTGAGGATTTACCACACACTCAATTGGCAATTGAGGATTTCCCATCTTCTCTATTCTTATCTAACAAGTATATCACAAACAATGCTTGCAGGTCGTGCCGGTTACAAGAGAACTACCCAATGCTGGAGAAGAGATGTTTGCTTTCCTTGGTCCTTACTCATTTACTTCATTTGATCTTGCTCTCGGCCAGCAGAAACATGTTTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015447