BGIOSGA015483

From RiceWiki
Revision as of 04:14, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015483| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015483, complete gene.| tag = H0211A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015483

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015483, complete gene.

LocusTag

H0211A12.6

Ensembl Transcript ID

BGIOSGA015483-TA

Ensembl Protein ID

BGIOSGA015483-PA

Length

4921

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:7427817..7432737

Sequence Coding Region

7432637..7432737,7431950..7432082),complement(7431703..7431857,7431381..7431573),complement(7431175..7431293
,7430874..7431090),complement(7430657..7430752,7430338..7430514),complement(7430131..7430247
,7429858..7430024),complement(7429518..7429742,7429049..7429370),complement(7428554..7428798
,7428296..7428434),complement(7428105..7428196,7427986..7428009),complement(7427817..7427862

Genome Context

<gbrowseImage1> name=IndicaChromosome04:7427817..7432737 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:7427817..7432737 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCCAAGCTGAGTTTCAAGCGAATGGACAGCATTGCCGAGACAATGCCAGATGCCCTACGACAAAGCCGGTACCAGATGAAGAGATGCTTCCAAAGGTACGTATCAAAGGGTAAGAGGCTCTTGAAGAACCAGCAGCTCATGGAAGAGCTGGAAAAGTCACTAGATGACAAAGTTGAGAAGGAGAAGCTTGTCGAAGGCTTTCTCGGTTACATCATTTGTTCGACACAGGAAGCAGTAGTACTCCCACCGTTTGTGGCATTCGCTGTCAGAATGAATCCTGGTATCTGGGAGTACGTCAAAGTTCACTCTGATGATCTTTCTGTCGAAGGAATCACACCGTCGGAGTATCTCAAGTTCAAGGAGACCTTATACGATGAAAAATGGGCCAAGGATGACAACTCACTGGAAGTTGATTTCGGTGCCCTTGACCTCTCAACACCCCATTTGACACTGCCCTCGTCAATAGGGAATGGGCTTCAGTTTGTCTCCAAATTCATGTCCTCAAAGCTGGGTGGCAAACCTGAAAGCATGAAGCCTCTGTTGGACTATTTACTTACCTTGAATTACCGTGGCGAGAAGTTGATGATTAATGACACCATTGACACTGTGAGCAAGCTTCAGACAGCACTGCTACTTGCAGAGGTTTTCGTTAGTGGGCTGCCAAAATACACGCCTTACTTGAAGTTTGAACAAAGATTTCAGGAGTGGGGGTTAGAGAAGGGATGGGGTGACACTGCGGAGAGGTGCAAAGAAACACTAAATTGTCTGTCTGAAGTGCTACAGGCACCAGATCCTACAAACATGGAGAAGTTCTTCAGCAGGGTTCCATCCATATTCAACATTGTCATCTTCTCTATTCATGGTTACTTCGGCCAAGAAAAGGTTCTTGGATTGCCGGATACCGGTGGTCAGGTTGTCTACATATTGGATCAAGTCAGAGCCATGGAAGAGGAGCTGCTTCAAAGAATCAAGCAGCAGGGTCTGCACGTAACACCGAAGATTCTTGTGCTTACAAGACTGATACCAGATGCCAAAGGCACAAAATGCAATGTGGAGCTTGAACCAGTTGAAAATACAAAATACTCACATATACTACGTGTGCCATTCAAGACTGAAGATGGCAAGGATTTGCGCCAGTGGGTGTCCCGGTTTGACATCTATCCTTATCTAGAGAGATATGCGCAGGACTCTTGTGCCAAAATTCTCGACATTTTGGAGGGCAAACCGGACTTGATAATTGGCAACTACACCGATGGCAACTTGGTGGCATCCCTCTTGTCTAACAAACTATGTGTCACTCAGGGAACAATTGCACACGCTCTGGAGAAGACAAAGTACGAGGATTCAGATGTTAAGTGGAGAGAGATGGACCAGAAGTACCATTTCTCTTGCCAATTTACTGCCGATATGATTTCCATGAACACCAGCGACTTCATCATCACTAGCACTTACCAAGAAATTGCTGGGAGCAAAGAGAAGCCTGGCCAATATGAGCACCACTACGCATTCACAATGCCGGGACTATGCCGCTACGCCACAGGCATTAATGTATTCGACCCAAAGTTCAACATTGCTGCGCCTGGTGCAGACCAGTCCATCTACTTCCCCTTCACGCAGAAGCAGAAGCGGCTGACAGATTTACACCCACAGATAGACGAACTGCTGTACAGCAAGGATGATACTGATGAACACATAGGGTATCTGGCAGACAGGAACAAACCAATCATCTTCTCGATGGCAAGGCTTGATAAGGTAAAAAACATAACTGGGCTTGTGGAGTGGTATGGCCAGAACAAGAAGCTGAGGGACCTCGTCAATCTCGTCGTCGTCGCGGGGCTCCTGGATGCTTCGCAGTCCAAGGATCGAGAGGAGATCGAGGAGATAAACAAGATGCACAACCTGATGGACAGGTACCAGCTCAAAGGACAGATCCGCTGGATCAAGGCACAGACTGACCGTGTCCGCAACGGTGAGCTGTACCGTTGCATTGCAGATACAAAGGGTGCATTTGTTCAGCCTGCACTGTATGAAGCATTCGGGCTAACGGTCATCGAGGCGATGAACTGCGGGTTGCCAACCTTCGCAACGAACCAGGGCGGACCAGCTGAGATAATCATCGACGGTGTCTCTGGTTTCCACGTAAACCCCATCAACGGCAGGGAGGCAGGAATCAAGATTGCAGATTTCTTCCAGAAATGCAAGGAAGACCCAAGTTACTGGAACAAGGTGTCCACTGCTGGGCTTCAGCGGATCTACGAGTGCTACACATGGAAGATTTATGCAACTAGAGTGCTAAACATGGGATCTACATATTCCTTCTGGAAGACACTAAACAAGGAGGAAAGACAAGCCAAACAACGTTACCTGCAGATATTCTACAATGTTCAGTATAGGAACCTGGCAAAGGCTGTGGCAAGAGCAGGGGATCAACAGGCTCGGCAAACCACAACAGGCGTGGCGCCTAGTGAGATCGTAGTTAGACCCAAAGAAAGAAAGCCGCAGACTCGGATGCAAAGGATCTTAACCAGGTTAGCCGGGCAGAAGCCTCCAATTTCTGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASKLSFKRMDSIAETMPDALRQSRYQMKRCFQRYVSKGKRLLKNQQLMEELEKSLDDKVEKEKLVEGFLGYIICSTQEAVVLPPFVAFAVRMNPGIWEYVKVHSDDLSVEGITPSEYLKFKETLYDEKWAKDDNSLEVDFGALDLSTPHLTLPSSIGNGLQFVSKFMSSKLGGKPESMKPLLDYLLTLNYRGEKLMINDTIDTVSKLQTALLLAEVFVSGLPKYTPYLKFEQRFQEWGLEKGWGDTAERCKETLNCLSEVLQAPDPTNMEKFFSRVPSIFNIVIFSIHGYFGQEKVLGLPDTGGQVVYILDQVRAMEEELLQRIKQQGLHVTPKILVLTRLIPDAKGTKCNVELEPVENTKYSHILRVPFKTEDGKDLRQWVSRFDIYPYLERYAQDSCAKILDILEGKPDLIIGNYTDGNLVASLLSNKLCVTQGTIAHALEKTKYEDSDVKWREMDQKYHFSCQFTADMISMNTSDFIITSTYQEIAGSKEKPGQYEHHYAFTMPGLCRYATGINVFDPKFNIAAPGADQSIYFPFTQKQKRLTDLHPQIDELLYSKDDTDEHIGYLADRNKPIIFSMARLDKVKNITGLVEWYGQNKKLRDLVNLVVVAGLLDASQSKDREEIEEINKMHNLMDRYQLKGQIRWIKAQTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHVNPINGREAGIKIADFFQKCKEDPSYWNKVSTAGLQRIYECYTWKIYATRVLNMGSTYSFWKTLNKEERQAKQRYLQIFYNVQYRNLAKAVARAGDQQARQTTTGVAPSEIVVRPKERKPQTRMQRILTRLAGQKPPISE</aaseq>

Gene Sequence

<dnaseqindica>1..101#656..788#881..1035#1165..1357#1445..1563#1648..1864#1986..2081#2224..2400#2491..2607#2714..2880#2996..3220#3368..3689#3940..4184#4304..4442#4542..4633#4729..4752#4876..4921#ATGGCATCCAAGCTGAGTTTCAAGCGAATGGACAGCATTGCCGAGACAATGCCAGATGCCCTACGACAAAGCCGGTACCAGATGAAGAGATGCTTCCAAAGGTACCGTAAATTGTGAATTAAATCTTTGATGGAATGCATTTCAGTTTTTTGTCCGTGTCAGCCAAAGCCTGGCAGAGGAATTTTATTCCTGTGGTTGAGACTTGCTTTTTTATTTTCAATGGAAATAGGTTGATGCATCAGTCCATACCAGCATATTCTAATAAGGGGGTACTTAATTAATGGCCCTTATGCATTTCCTTTATAAGAACTAATAAGAAAGAACATTCATACATTTGTAATTAGGACGATGCTGCATAAAAACATGTAAAGCATATCTAAATTAGCTAGAGACTAATCAAACAGTGTAAGCACCTGAACGTAGTCTGAATCGATGTTTTAAAAAGCGGTAAGCGGTTTGGGGTGGCCACCTCACCTTGTAGTGCTTATGTGGCATTATCGGCCGCTTATGCGATATAATCAGCTACTTATGCGGCATAGGCACGGACCAAGGTTGGTACACATGTTCCTCTTGTATATGGCCTTGTAGACCCTTTTTAAAACACTGTTTGAATATCTTGCTCATGATTCTCAAGTATAGGATAAAAATGTTCTAGGTACGTATCAAAGGGTAAGAGGCTCTTGAAGAACCAGCAGCTCATGGAAGAGCTGGAAAAGTCACTAGATGACAAAGTTGAGAAGGAGAAGCTTGTCGAAGGCTTTCTCGGTTACATCATTTGTTCGACACAGGTGATTTCACTTTAAAATCATAATCTGTTTTCAGACAAAGTAAACTGTGATAAACTGGAGCTCATTACATTAAGCAACGATTTTGTTTGCAGGAAGCAGTAGTACTCCCACCGTTTGTGGCATTCGCTGTCAGAATGAATCCTGGTATCTGGGAGTACGTCAAAGTTCACTCTGATGATCTTTCTGTCGAAGGAATCACACCGTCGGAGTATCTCAAGTTCAAGGAGACCTTATACGATGAAAAATGGTATGCATATCCATGATCCACTAATCCAGTACGTAGTAGCTAATGCGAACATTTCCATATATAGATTGAAGAAGAACAGGAGCCTGAAACTTGAAAAAAAAATGGTCGATCTGACCATGTGCATTTCAGGGCCAAGGATGACAACTCACTGGAAGTTGATTTCGGTGCCCTTGACCTCTCAACACCCCATTTGACACTGCCCTCGTCAATAGGGAATGGGCTTCAGTTTGTCTCCAAATTCATGTCCTCAAAGCTGGGTGGCAAACCTGAAAGCATGAAGCCTCTGTTGGACTATTTACTTACCTTGAATTACCGTGGCGAGGTACCGCGAGATCATTCAGCTGTGCCATTATTATCAGGTGGCCAACGTACCCCGCTGAATGATACTTTTTATCTTATGATCATGTAGAAGTTGATGATTAATGACACCATTGACACTGTGAGCAAGCTTCAGACAGCACTGCTACTTGCAGAGGTTTTCGTTAGTGGGCTGCCAAAATACACGCCTTACTTGAAGTTTGAACAAAGGTGAAGTACTTTAATCTGAAGTTGTAGATAGACAAAAAAAAATTGTAATCATGCTTAAGTTTTCTCTATTATGTGTTCTTGCAGATTTCAGGAGTGGGGGTTAGAGAAGGGATGGGGTGACACTGCGGAGAGGTGCAAAGAAACACTAAATTGTCTGTCTGAAGTGCTACAGGCACCAGATCCTACAAACATGGAGAAGTTCTTCAGCAGGGTTCCATCCATATTCAACATTGTCATCTTCTCTATTCATGGTTACTTCGGCCAAGAAAAGGTTCTTGGATTGCCGGATACCGGTGGTCAGGTACCCAACTTACCGGTTTTCTGGAATCTCTCGCGCATAATCATTATAACTCTTAAAAAAATGGTCACAACTTAATTATCGGTTAACAAAACTCTAAAGAATGGTTTCGTGAAATATATAGGTTGTCTACATATTGGATCAAGTCAGAGCCATGGAAGAGGAGCTGCTTCAAAGAATCAAGCAGCAGGGTCTGCACGTAACACCGAAGATTCTTGTGGTAAATTTCATTGATTTCACGATATATATATTCCTGTACAATGAAATATAGTGAATGACGAATAGGTATATATATATAAATGAGATGATATGAATGACGAATAGATTAGCTAAACCAGTGGGCACTATATATATTCCTGCAGCTTACAAGACTGATACCAGATGCCAAAGGCACAAAATGCAATGTGGAGCTTGAACCAGTTGAAAATACAAAATACTCACATATACTACGTGTGCCATTCAAGACTGAAGATGGCAAGGATTTGCGCCAGTGGGTGTCCCGGTTTGACATCTATCCTTATCTAGAGAGATATGCGCAGGTTTGTCAGCTATGAATTACTATGAGTTACTGATACCCTTTGCGCGGGCCTGTGATCTTTATAGTAAGTTTCCATCCAACGTAATTTCAGGACTCTTGTGCCAAAATTCTCGACATTTTGGAGGGCAAACCGGACTTGATAATTGGCAACTACACCGATGGCAACTTGGTGGCATCCCTCTTGTCTAACAAACTATGTGTCACTCAGGTGAAACCGGCTTGTCAAATGGCTGCACGTACGGTGGTTATCCCTTTTTAGGACCAACGTTACCATGATTTGGTATGACATGAAAAATGCATGATCTTGATGACAGGGAACAATTGCACACGCTCTGGAGAAGACAAAGTACGAGGATTCAGATGTTAAGTGGAGAGAGATGGACCAGAAGTACCATTTCTCTTGCCAATTTACTGCCGATATGATTTCCATGAACACCAGCGACTTCATCATCACTAGCACTTACCAAGAAATTGCTGGGAGGTCGGTAGCTAAGGCTGAAATAGTCTCTCTATAAATCTAGTGCTTCAAGGACACTCAAATTATTAAGTGTTAATTGCTTAGCCTAGAAATTAACAAGATCGAACATCTGATGCAGCAAAGAGAAGCCTGGCCAATATGAGCACCACTACGCATTCACAATGCCGGGACTATGCCGCTACGCCACAGGCATTAATGTATTCGACCCAAAGTTCAACATTGCTGCGCCTGGTGCAGACCAGTCCATCTACTTCCCCTTCACGCAGAAGCAGAAGCGGCTGACAGATTTACACCCACAGATAGACGAACTGCTGTACAGCAAGGATGATACTGATGAACACATGTAAGCTACTACCCGGACGGCCAGGCTCCTTGGAAACGTACCTAGCTACAAATTAACTTCTCTTTTACTGTTAGATCAGATCAGACAACTTAAGTTGGTTAATTAAGTGCTAATTGCTGCTCTTCACCTTTTTTTAATTTAAACCAGAGGGTATCTGGCAGACAGGAACAAACCAATCATCTTCTCGATGGCAAGGCTTGATAAGGTAAAAAACATAACTGGGCTTGTGGAGTGGTATGGCCAGAACAAGAAGCTGAGGGACCTCGTCAATCTCGTCGTCGTCGCGGGGCTCCTGGATGCTTCGCAGTCCAAGGATCGAGAGGAGATCGAGGAGATAAACAAGATGCACAACCTGATGGACAGGTACCAGCTCAAAGGACAGATCCGCTGGATCAAGGCACAGACTGACCGTGTCCGCAACGGTGAGCTGTACCGTTGCATTGCAGATACAAAGGGTGCATTTGTTCAGGTACATACCAGGGTTTTAAATCTCCCGCTATAGTTGTTTGAGAAGGGTTTTAGCTATTTGCTCTAATGTACAATTTAGCCGCTATAGCTTTATTTAGCCCGCTAATACTATTTGGGAAGCTAACCGCCAAATGTCTTAGCCCGCTATTTAAAACATTGGTACTTACACAACAGAAGTAGTAACAGTTTAATTAATTGGATCAACAGAAGTAACTCAACTCTAACCTTGACCTTGCATTCGTTGACTGCAGCCTGCACTGTATGAAGCATTCGGGCTAACGGTCATCGAGGCGATGAACTGCGGGTTGCCAACCTTCGCAACGAACCAGGGCGGACCAGCTGAGATAATCATCGACGGTGTCTCTGGTTTCCACGTAAACCCCATCAACGGCAGGGAGGCAGGAATCAAGATTGCAGATTTCTTCCAGAAATGCAAGGAAGACCCAAGTTACTGGAACAAGGTGTCCACTGCTGGGCTTCAGCGGATCTACGAGTGGTGAGTGAGGGTCCTATATCCTTGCATGCGTCCTGTTCTTTTTTTTTTGTTTTTGTTTTTGTGCACAACTTAGATCAATCCTCCTATATATATGGCACTAACTAAATCCATGATGGCAGCTACACATGGAAGATTTATGCAACTAGAGTGCTAAACATGGGATCTACATATTCCTTCTGGAAGACACTAAACAAGGAGGAAAGACAAGCCAAACAACGTTACCTGCAGATATTCTACAATGTTCAGTATAGGAACCTGGTTAGTATGAATATATACATGCATCAATCTGAGTAGTATAGTATATTCTTTATCGAAAGGATGTCAGTCTGATCAAGTGTACAATGTCTAATATCACAGGCAAAGGCTGTGGCAAGAGCAGGGGATCAACAGGCTCGGCAAACCACAACAGGCGTGGCGCCTAGTGAGATCGTAGTTAGACCCAAAGAAAGGCAAGTGTGCCCGCTATTACGAAATTTACTGAAGAAAGACCGGGCAAGCAACTGACTGACCCGTTAATTTGTTGTTTGGAATTTGGATGCTGCAGAAAGCCGCAGACTCGGATGCAAAGGTGAATGCATGCGTCTTCTTATTTTTCGCAATATCTCTATCGATTTAGTACTTAATTAATTAGCTGTGAAGAAATGAACAAAATAACTAATCCACTTGAATGCTCTGCTCCGTGTGTGCTCAGGATCTTAACCAGGTTAGCCGGGCAGAAGCCTCCAATTTCTGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015483