BGIOSGA015508

From RiceWiki
Revision as of 04:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015508| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA015508, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA015508

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA015508, complete gene.

LocusTag

OSJNBA0027O01.11

Ensembl Transcript ID

BGIOSGA015508-TA

Ensembl Protein ID

BGIOSGA015508-PA

Length

2008

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:6344170..6346177

Sequence Coding Region

6345633..6346177,6344538..6344859),complement(6344170..6344430

Genome Context

<gbrowseImage1> name=IndicaChromosome04:6344170..6346177 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:6344170..6346177 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGCCTCCGACCCCGCCCCCGCCGCCGCCGCCGCCGCCTACGACCGCACCGCCGAGCTCCGCGCGCTCGACGCCACCCTCTCCGGCGTCCGCGGCCTCGTCGCGTCGGGCGCCACCCACCTCCCCCGCATCTTCCACAACGTCGTCCATGGTGATCAAGAACCACCGGAGGCGACGGCGCCATCGTCCGCGGCCACGACCACGACGACCGTCCCGGTGATCGACATCAGCGGGAGCCGCGCGGCCGTGGTCGACGCCGTCCGGCGGGCGGCGGCGGAGTGGGGGTTCTTCCAGGTGACGGGGCACGGGGTTCCCCTCGCCGCGATGGACGCCGCGGCGGGCGCGGCGCGCGCGTTCCACGAGTCCGGCGGCGGCGAGGGCAGCGACAAGGCGCGGCTCTACTCGCGCGAGCCCGGGAGAGCCGTCAAGTACCACTGCAACTTCGACCTGTACCAGTCGCCGGTGGCCAACTGGCGCGACACGCTCTACCTCCGCATGGCGCCCGACCCGCCGCCCGCCGCCGACTTGCCGGAGATCTGCCGGGATGCACTGTTTGAATATGCCAAACAAGTAAAGAATTTGGGGAACACACTGTTCGAGCTGCTCTCGGAGGGCCTTGGGCTCAAACCGAGCTACCTGACAGACATAGAATGCAACCAGGGGCAAATCATACTATGCCACTACTACCCTCCCTGCCCCCAGCCTGAGCTCGCCATCGGGACAAGCCGGCATTCGGACTCCGGCTTCCTCACCATACTTCTCCAGGATGACATTGGGGGCCTCCAGATCCTCCATGAGGACCGATGGGTCGATGTCACGCCAACTCCTGGAGCGTTCATCGTCAATGTTGCCGATCTCCTGCAGTTGATCTCCAATGACAATTACAAGAGTGTGGACCATAGAGTGGTGGCGAAGAACACTGAACCGAGAGTCTCGATTGCCTGTTTCTTCAGCACCCATTTTCATCCGATTTCCACGAGGATGTATGGCCCGATCAAGGAGCTGTTGTCTGATGAGAACCCGCCTTTGTACAGGGAGGCACTCGTCAGAGATTACACCGCGCGTTACTACTCCGTTGGGCTAGATGGCAAGTTCAAGACTACTCTTTCTGAATTCCGGTTATAG</cdnaseq>

Protein Sequence

<aaseq>MPASDPAPAAAAAAYDRTAELRALDATLSGVRGLVASGATHLPRIFHNVVHGDQEPPEATAPSSAATTTTTVPVIDISGSRAAVVDAVRRAAAEWGFFQVTGHGVPLAAMDAAAGAARAFHESGGGEGSDKARLYSREPGRAVKYHCNFDLYQSPVANWRDTLYLRMAPDPPPAADLPEICRDALFEYAKQVKNLGNTLFELLSEGLGLKPSYLTDIECNQGQIILCHYYPPCPQPELAIGTSRHSDSGFLTILLQDDIGGLQILHEDRWVDVTPTPGAFIVNVADLLQLISNDNYKSVDHRVVAKNTEPRVSIACFFSTHFHPISTRMYGPIKELLSDENPPLYREALVRDYTARYYSVGLDGKFKTTLSEFRL</aaseq>

Gene Sequence

<dnaseqindica>1..545#1319..1640#1748..2008#ATGCCGGCCTCCGACCCCGCCCCCGCCGCCGCCGCCGCCGCCTACGACCGCACCGCCGAGCTCCGCGCGCTCGACGCCACCCTCTCCGGCGTCCGCGGCCTCGTCGCGTCGGGCGCCACCCACCTCCCCCGCATCTTCCACAACGTCGTCCATGGTGATCAAGAACCACCGGAGGCGACGGCGCCATCGTCCGCGGCCACGACCACGACGACCGTCCCGGTGATCGACATCAGCGGGAGCCGCGCGGCCGTGGTCGACGCCGTCCGGCGGGCGGCGGCGGAGTGGGGGTTCTTCCAGGTGACGGGGCACGGGGTTCCCCTCGCCGCGATGGACGCCGCGGCGGGCGCGGCGCGCGCGTTCCACGAGTCCGGCGGCGGCGAGGGCAGCGACAAGGCGCGGCTCTACTCGCGCGAGCCCGGGAGAGCCGTCAAGTACCACTGCAACTTCGACCTGTACCAGTCGCCGGTGGCCAACTGGCGCGACACGCTCTACCTCCGCATGGCGCCCGACCCGCCGCCCGCCGCCGACTTGCCGGAGATCTGCCGGTAATAAGCCGCTTCCTCTCACAGCCTCACTGTATACTTCTTCCCTAGAATACTGTTAGATCTTGCAAGTATCACACTTCAATTAGGATATTGCTGGTAAATCTTTAGAATATGATGGCCTTTGTACGAGTTAATTAAGCTCATTAGTGAAATCTGTAGTGAGATCAGCTTGATTAGATCCAAGATCTGAGTCATTTGCTGACTAATTTAACAATCCCAGTTAAGCTTATTGTTGTTATTGGGAAGAACAACTAGTACAGCCTTTTTGTTGTTGTTGTTGCTGTGCTTTTTTGTGTGAAAGGATCATGCATCTTGAATCTGGAAATTTTCGAATAATATCCGAAATGACAAATTAAGCTGCGTAGTAGTAGGGCAGAGAAGGAAAAGATGATTGCTGGGTCACATACTTTCATGTCCGGTGCCCCAAAAATAAGATACAAGAATAGTTTCCAGGATATCAATATAATTAGTAGCCTTTTTTATTCAAACTCACATCACATGGTTATCAAAAAAAAACTAATTGTACAATGAAATTACTCAGAGTGGGACCTCCTTTATATTATCTAAAAAAGTGAGCCCTGTGTTTATCCTGTACTGTCAGTAAAAGGGGCACTGCTTTGACGAAATCAGAATTTTACCTGTACTTATAGATGCCCCCTTTTTTTTAGCATATAGTGTTTCTAGACTATAAATTGGATTGCTGAGACTTAGTCGTACCATCAGTTCTCTTTTGGTGTTTAAGGGTAACATATGTAGCTTGCATTAATATGCAGGGATGCACTGTTTGAATATGCCAAACAAGTAAAGAATTTGGGGAACACACTGTTCGAGCTGCTCTCGGAGGGCCTTGGGCTCAAACCGAGCTACCTGACAGACATAGAATGCAACCAGGGGCAAATCATACTATGCCACTACTACCCTCCCTGCCCCCAGCCTGAGCTCGCCATCGGGACAAGCCGGCATTCGGACTCCGGCTTCCTCACCATACTTCTCCAGGATGACATTGGGGGCCTCCAGATCCTCCATGAGGACCGATGGGTCGATGTCACGCCAACTCCTGGAGCGTTCATCGTCAATGTTGCCGATCTCCTGCAGGTACCATGCTCAGAGTCAAGACCAACCAAACTTGAATTCAGAAAATAGTCTAGAAACATGTTCTTGATTGTTCGGAGCTTATTCTTTCCATTTGATCATATGTTCAGTTGATCTCCAATGACAATTACAAGAGTGTGGACCATAGAGTGGTGGCGAAGAACACTGAACCGAGAGTCTCGATTGCCTGTTTCTTCAGCACCCATTTTCATCCGATTTCCACGAGGATGTATGGCCCGATCAAGGAGCTGTTGTCTGATGAGAACCCGCCTTTGTACAGGGAGGCACTCGTCAGAGATTACACCGCGCGTTACTACTCCGTTGGGCTAGATGGCAAGTTCAAGACTACTCTTTCTGAATTCCGGTTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015508