BGIOSGA015511

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Revision as of 04:15, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA015511| Description = Putative uncharacterized proteincDNA| Definition = Oryza sativa Indica Group BGIOSGA015511, complete gene.| tag = OSI...")
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Gene Name

BGIOSGA015511

Description

Putative uncharacterized proteincDNA

Definition

Oryza sativa Indica Group BGIOSGA015511, complete gene.

LocusTag

OSIGBA0140C02.5

Ensembl Transcript ID

BGIOSGA015511-TA

Ensembl Protein ID

BGIOSGA015511-PA

Length

6325

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:6246107..6252431

Sequence Coding Region

6251886..6252431,6251303..6251517),complement(6248306..6248545,6247112..6247310),complement(6246107..6246472

Genome Context

<gbrowseImage1> name=IndicaChromosome04:6246107..6252431 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:6246107..6252431 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCGCCGCCGTCTGCAGCTGCTGCTTCTCGCCGCCGTCGTGCTCGTCCACGCCGCCGCCGACGGTTGCCGAGTGTTCCAGATCGAGGAGGCCACCGTCGACGACATCCAGCTCGGCTTCATCAACGGCAGCCTCACCTCCAGGCAGCTCGTGCTCTTCTACCTCGACCGCATCGCCCGCCTCAACCCGCTCCTCCACGCCGTCATCGAGGTCAACCCCGACGCGCTCGCGCAGGCGGCGCGCGCCGACGCCGAGCGGCGGCGCGCGGCGTCGCCGTCGTCGTCGTCGTCGGGCAGCTGCTGCGGCGGGCTCCACGGCGTCCCCGTGCTCCTCAAGGACAGCATCGCGACGCGCGACCGGCTCAACACGACGGCCGGGTCGCTGGCGCTGCTGGGCTCCGTCGTCAGGCGGGACGCCGGCGTGGTGCGGCGGCTCCGGCGAGCCGGCGCGGTGGTGCTCGGCAAGGCCAACCTCGACGAGTGGGCCAACTTCCGCACCATCCAAGGCACCGGTGGCTGGAGCGCTCGCGGTGGCCAAAGCCGGAATCCATATGTTCTATCAGCTGCTCCATGCGGTTCAAGCACAGGATCAGCCATTGCAGCTGCAGCGAACATGGCGGCCGTGACACTAGGGACCGAAACCGATGGATCCATACTCTGCCCATCGTCGTTGAATTCAGTGGTTGGGATCAAACCAACGGTTGGATTGACAAGCAGGGCTGGTGTTGTTCCTATCTCCCCTAGGCAGGACACTATCGGGCCAATTTGTCGGACAGTAACAGATGCCGTCCACGTGCTGGATGCGATTGTTGGCTACGACAGCCGTGACGCAAAAGCCACACGGGCAGCATCAAAGTACATCCCACCGGGTGGATATAGGCAGTTTTTGAAGCCTGATGGATTAAAAGGCAAGAGAATAGGCATCCCAAATGGATTTTTCAACTTCCCAAATGGGACAGTGCAACAGATTGTTTACCAGCAACTTCTCGACACAGTGAGGAAACAAGGAGCGGTTGTGATTGAGAACCTAGACATAGCAAACTTGGCTGTTATACAAGATGTCCTTAACAATGGGGAACAGATTGTGTTAGCAGCAGAGTTCAAGTCAAGCCTTAACACTTATCTGTCAGACTTATCCTACTCCCCAGTTCGTTCACTTGCAGATATAATTGCTTTCAACAACGCACATCCGATTGAGGAGAGGCTAAAGAATTTTGGGCAGCTCATCTTCCTGGTAGCTGAGAATACTACTGGCATCGGTGCACTCGAGGGAGCTGTGATCCGTCAACTAAACGAGCTTTCAGCTGACGGACTGGAGAAGCTGATGCAGGATGAGCAGCTTGATGCAATTATCACTCCCAATGACCTAGTTTCCACTGTTCTCGCCATTGGCGGCATGCCGGCAATCACCGTACCAGCTGGATACGGTAAGATGGGAGTCCCCTTCGGAATTTGCTTTGGTGGATTGAAGGGCTATGAGCCGAGGCTAATTGAGATGGCTTATGCATTTGAGCAAGCTACCAAGGTCAGAAAGGCCCCTAAGTTCTTGCACGGAACATTTTAG</cdnaseq>

Protein Sequence

<aaseq>MSRRRLQLLLLAAVVLVHAAADGCRVFQIEEATVDDIQLGFINGSLTSRQLVLFYLDRIARLNPLLHAVIEVNPDALAQAARADAERRRAASPSSSSSGSCCGGLHGVPVLLKDSIATRDRLNTTAGSLALLGSVVRRDAGVVRRLRRAGAVVLGKANLDEWANFRTIQGTGGWSARGGQSRNPYVLSAAPCGSSTGSAIAAAANMAAVTLGTETDGSILCPSSLNSVVGIKPTVGLTSRAGVVPISPRQDTIGPICRTVTDAVHVLDAIVGYDSRDAKATRAASKYIPPGGYRQFLKPDGLKGKRIGIPNGFFNFPNGTVQQIVYQQLLDTVRKQGAVVIENLDIANLAVIQDVLNNGEQIVLAAEFKSSLNTYLSDLSYSPVRSLADIIAFNNAHPIEERLKNFGQLIFLVAENTTGIGALEGAVIRQLNELSADGLEKLMQDEQLDAIITPNDLVSTVLAIGGMPAITVPAGYGKMGVPFGICFGGLKGYEPRLIEMAYAFEQATKVRKAPKFLHGTF</aaseq>

Gene Sequence

<dnaseqindica>1..546#915..1129#3887..4126#5122..5320#5960..6325#ATGTCTCGCCGCCGTCTGCAGCTGCTGCTTCTCGCCGCCGTCGTGCTCGTCCACGCCGCCGCCGACGGTTGCCGAGTGTTCCAGATCGAGGAGGCCACCGTCGACGACATCCAGCTCGGCTTCATCAACGGCAGCCTCACCTCCAGGCAGCTCGTGCTCTTCTACCTCGACCGCATCGCCCGCCTCAACCCGCTCCTCCACGCCGTCATCGAGGTCAACCCCGACGCGCTCGCGCAGGCGGCGCGCGCCGACGCCGAGCGGCGGCGCGCGGCGTCGCCGTCGTCGTCGTCGTCGGGCAGCTGCTGCGGCGGGCTCCACGGCGTCCCCGTGCTCCTCAAGGACAGCATCGCGACGCGCGACCGGCTCAACACGACGGCCGGGTCGCTGGCGCTGCTGGGCTCCGTCGTCAGGCGGGACGCCGGCGTGGTGCGGCGGCTCCGGCGAGCCGGCGCGGTGGTGCTCGGCAAGGCCAACCTCGACGAGTGGGCCAACTTCCGCACCATCCAAGGCACCGGTGGCTGGAGCGCTCGCGGTGGCCAAAGCCGGGTAAGGCTAAGCTACCTCCTCTCACTCGCTAACTTCGCCATTGGTTTCTCCATCACAAAAGTCAATGCTGAATATCGATCTCTTTAGTTCAAAAAATTAGCTTGTATATTCCATGCCAAGTTCTTGGAGAATTCTTTTAGGAAAATAACCATCAATGCAATTCTGCAAATTCTTTTGTAGCTTGTCGAAACATAATCCACACTAAAATTTAGTGTGAATTCTGTAAGGTCGTCACTGGGTTTATCACTTATCACCTTTGTATTTTTCAGACAGGAAAGCATATTTTTGTGTTGCAAAATTATTCAAAACTCAAGCAATTATATATGGCATATACTGTACATTAGTAAATATTTGGCATGTATATGTAGAATCCATATGTTCTATCAGCTGCTCCATGCGGTTCAAGCACAGGATCAGCCATTGCAGCTGCAGCGAACATGGCGGCCGTGACACTAGGGACCGAAACCGATGGATCCATACTCTGCCCATCGTCGTTGAATTCAGTGGTTGGGATCAAACCAACGGTTGGATTGACAAGCAGGGCTGGTGTTGTTCCTATCTCCCCTAGGCAGGACACTATCGGGTAAGCTAAGGCCTCGATCGTTTCCTCGTTCGGCAGTTACAAATTTCTTATTTCTGTATACCCATTTACCAAACAGTTAAATAGTGTATTTTTTTAGGAAAAAAACATTTTATTTAGTAATGTTTCCAAAGAAATCGAATAAATTTAATTTTTAAGTTCATAATTATTGATAATCAATTAATCGTGTGCCTGTCTTAGCTCGTTTTACGTGTAAATAAAAAATAACAGCTACTTATTAGAACCGAGACTAATACATGCATTACTTATTTAGCCCATACCGATGGTTGATGTTTTTTTACTGTCACTATCCAGTTGTTTTCTTGTGATTGCACGAGATCCAAAGTACACTTTATTTTATTTTCTTAATGTGCCAATTGGACAATTGGCTTAGTAAACTCGATACTGACAAGTCAATGAAGGATGTTTATACATAACAGATACTTCGAGTAAATTACTTAACAAATGCCATCAGAAAATATCATGTACAGCAAAATGTTATTCGAAATGTTGAAAAATACGGAAAATACAACTAGCTATGTCAATATGTTTCCCATCCTGAGGTCCACATCAATCTAGTGAGAAAATATAGAAAATGACGGTTTACCCGTTATTTCTTCCCCAACATGGGCATGGACTAAATGGCACACGACATAAATCAAATGAAGTCCAAACATTTCATAAAAATTCAGAGATGGACTTCAAATATTTACTTCGAAACAATTTTATATGTATTATATTGAATTAGTTTCTATGGTCATTTTTATTAATTTGCTTGATATTGTGATTTTTCCTACTTGTTGTTTTATTTTTCAAAATACAAAAGAAAATCTGGGAAGCTGATCTAAATAAGTCGTCAGATTTTTGGATGCTATACTTATACTGTAAAGGCCTGCTAAGGTTAAAAAAATTAAGAAAAGAAAAAAAAAGAAGGGCATGATTAATATGAAACTTTTATAATCTTCCGATGGAAAATGTGATGGCAATAGAAATTGGATGATTCGTTGTTAACACAAAAAATTTTTCGCATGAATCCTTATTTCCCCTAGTTATGTAGGCAGTGTCATTTTTTCTATAATATAATATAGAGTAAAGTCCATCACCGGTCCCTAAACTTGTACCGCTGTGTCATCCCGGTCCCTAAACTCGCAAATCGACCGTTCAGGTCCTTAAACTTGTTTGACTGTGTCATTTCGGTCCCTAAACTTGCAGATCACTCGTTTAGATCCTCCAACTTGTTCAGTTGTGTCACCCTGGTCCCTGAACTTGTATTTGAATATCATCTGGGTCAAATAGGACGGTCTAAAGACTTTATATCTAAAAATAATTCATAACTTTTCCTGTGAACTCTAATGAAGACAAACTTTATATCAACATGTAGCCCTCGACGCGATCTACAACTTTGTAGTTGAATTTTTTTATTTTAAGTCATTTTTTGTCCCAAAATGTAATTTGAAAATTAAAATTTTAAAATCTATAAACATGCAACAATATTTTGGGACCCTAAACAGTTTTAATTCAAAAACTTTTCAATTACAAAGTTGTAGGTCGCATCGAGGGCTATAATTTTGATATAAAGTTTGTCTTCATTAGAGTTCGCATGAAAAAGTCATGAATTATTTTTTGATATAAAGTTTCTAGACCGTCCTGTTTAGGGCCGGGGTGACACAACTGAACAAGTTGGAGGACCTAAACAAGTGATCTGCAAGTTTAGGGACCGGGATGACACAGTCGAATAAGTTTGAGGATCTGAACGGTCGATTTGTGAGTTTAGGGACCGGAATAACACAGCGGTACAAGTTTAGGGACCGGTGATGAACTTTACTCTATAATATAATATAATGGATGTTTGTGATGGCATTGTCCTATTTTGCTGTCCGTAGACTGTAGTTCTTTGATTGACACTAGTTGTCAAATTTATAACCATGACTTAACTTTCATAATAACATACCTTTATAATCAAGGTTTTTTCTCTTTGTTATTATGTTATTACTCTTTTTTTTCAAATTGTTTATGGTCTACATGGCTCGCTAAGTCTCCAACTGGTTATGTAGTTCAGGCCTTGTTTAGATTCCAACTTTTTTCTTCAAACTTTCAACTTTTCCGTCACATCGAACTTTCCTACACACACAAACTTCCAACTTTTCCGTCACATTGTTGCAATTTCTTCAAACTTCTAATTTTGCCATGGAACTAAACACAGCCTCAGTTTGCCAATTGCCAAATAATATCATCCATTTTAGGAATGGCTAGAGACCTTTATTTACAACCTAACTTGCATAGTTGATGCTAAACTTCATCACAACAATGTCCTTGTATGAAGAATCATGATAGTATGGAAGATGAGGATGTTTTCAATTCTGAAAATTCAAAGATGCGGGTCTCATCTTTTCGCTTATGCTTATAAGCTAAAAATTGAATTTCGACCTTAAATTTGGAGTTGATTTTGGGGTTTTTCATCGAAGTTTATTTTTCAGCCTTTGTTCTTAGATCACTAATAACACGTATATAAAAGTTTTATTTACAAAATATTTTTCGTTTGCAAATATACCGTTTCGCTTATTCCTCCAATAAGCGAAAACGATGGGTCCGGCAAACAAATTTAATTAGAAAATATTTTTAATGTCATTAAATATATAGTCCGGGGAATACTGAATCTACTGTTCTAAAATATGTCAATCGGACATAACGAATGGATGAAAATGATCATACTGTAAAGTGATGAAATTCCTTGGATGAATCCCGTCAATTCAAATGCAGGCCAATTTGTCGGACAGTAACAGATGCCGTCCACGTGCTGGATGCGATTGTTGGCTACGACAGCCGTGACGCAAAAGCCACACGGGCAGCATCAAAGTACATCCCACCGGGTGGATATAGGCAGTTTTTGAAGCCTGATGGATTAAAAGGCAAGAGAATAGGCATCCCAAATGGATTTTTCAACTTCCCAAATGGGACAGTGCAACAGATTGTTTACCAGCAACTTCTCGACACAGTGAGGTATGCAATTACAGGAATTTTCACAAAATTATATACGTTGGCAGAATAGAAGAAAAATTGACATTTCAAATTGCATTTTACAGAAATAAAAATCACGCATTTATTATTAATTCCCATCAAATTATATATATGTTGCAAGTTTATACTATGAACATGCAATCATTTTACAAGGTGCTTCCTTTTGTTTCCTGTAAATCAAAACGTATGCATGACTTGCCCTCATCAATATGAAATATGATTTAAAATGCCAAAATTTAGGCATGATTTACCTGCATGCAAAACATAGTACATAGCTAAGTTTTTATTTTCTGTTTCCGCTTACATTACATACTTGGCACGAATTTATTTACCATATAGTTTATAAAGTTCCTTTAGAGAAATCACTGAAAAAAAAGTTGGTACATAAGCTAAATTATTGACTACGTTCCCAATTACTCTTCCATATTCCAAGTTATTCTCATGTAAACATATAAACAATTATAACTTGCACAATAATTCGGATATGTGCCTCCCTGATTTCAATATGAGGAAATTTTGGCATATATTTAGTTACAGTTGGAATGTCCCCTTTCAGCTGTTTTTATATTAATTAAATTTACGAAGTTGTGATTAAAGCATCTGGAAACCACAATTTTCCACTAGCCGGTTGATGTGTATTCCATCAAACTTATATATCTGCAATCAAATAATATTTAGTTACTGCAAATGTCAGAAACAAATGTGCTTTATTTGGAAGTAAATTGAAATGTGTATTTTTTTTATTGCATGCAAAGAAGGTGTAATTTTTGTGAAATTTACTGTAATGAATATATATTGGACTTTATGGAACATCCGTATTCTATATTATCGCACGTATAGGCCAACAGATATGGTGTGGCATGATGTGCATTATCAACCAGTTTAGGTCATATGCCTTCCAATTTATAAATATATATATATGGCGATAGAGAAAAGTCAGTTTCCTAGATATTTGACTTTTACATCATTCTTTGAAGGAAACAAGGAGCGGTTGTGATTGAGAACCTAGACATAGCAAACTTGGCTGTTATACAAGATGTCCTTAACAATGGGGAACAGATTGTGTTAGCAGCAGAGTTCAAGTCAAGCCTTAACACTTATCTGTCAGACTTATCCTACTCCCCAGTTCGTTCACTTGCAGATATAATTGCTTTCAACAACGCACATCCGATTGAGGTCAGCTGTGTAGCTCCTAATTAACCTTCTGGTGTTGATTCTCTCACAGTTCCACATTGCACATATCTTGCTAGAATTTTTTTTTTCTGCAAATCTGAAGAAAATGTACATATTTACTTTACTACCTTATATATTATATAACGAGACTTCGGAAAAAAAATGATATCTCAGGATACACTTAATCAACTTGTTCAACCTTTAGTAACGTATATAAAATCATGTATACATTTTTCTAGAGGCATTTTCTAGGGGCATACCTAAACCATGCATAGAATTTTCAACAGAATTATCACATCCAATTTCATAGTATTTTCAGATGACACATGATTAGAAAATTCTCTTTTGGATTGACACTATCAATTATCAATGAGGTCTAAGATGAAAAATACAAAAATAAAAAATCAAATATCCCGAATACATAAAACTGATAATTAGCACCACTACTCTTGTATACCAAACTCTTTGTGCATCAAGGTATATTCATGTTGTTGCAGATTATGAAGTTAATATCACCATAGTATATTGCACATCTTATTTTGTTGAAGATTATGAATCTTTGTATGTAATGTAATCAGCTTAAAATTAAAAAAACAGTCAGAACAGCTAGCTAAATGATATTGCCAAAAATGTGTATAACAGGAGAGGCTAAAGAATTTTGGGCAGCTCATCTTCCTGGTAGCTGAGAATACTACTGGCATCGGTGCACTCGAGGGAGCTGTGATCCGTCAACTAAACGAGCTTTCAGCTGACGGACTGGAGAAGCTGATGCAGGATGAGCAGCTTGATGCAATTATCACTCCCAATGACCTAGTTTCCACTGTTCTCGCCATTGGCGGCATGCCGGCAATCACCGTACCAGCTGGATACGGTAAGATGGGAGTCCCCTTCGGAATTTGCTTTGGTGGATTGAAGGGCTATGAGCCGAGGCTAATTGAGATGGCTTATGCATTTGAGCAAGCTACCAAGGTCAGAAAGGCCCCTAAGTTCTTGCACGGAACATTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA015511